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Oryza sativa
cluster # 2612 cluster # 2612       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2612#0 length = 1567 sequences # 2  

consensusID : consensus_2612#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1567
fasta sequence
                              [ACAGGGAAGCCGCCGCATCCCCAAATTCGCCGGCTTCCTCCCTCCCGAGCTAGGTTTCCGTCTCGCCGCCGCCGCCGCCGCCGCCCGCCTCCTTTTACTTTTTCCGCACCCCAATTCGCTCCGCTGCCCACCTCCTTTCCTTTTTCCGCTGCCAGCCGACTAGGGTTTCCGCCTCCTCGCCGGACGGACGCCGCGAACCCCCCCCCACACGGCCACACCTCGCGCCGGCTCCCTCCTCGCGTTCCGCTTCCCTCGCATTACAAGCGGCGCCGGTCCCGGATGGCGGAAGATGCCAATGCCGGTCGCAAGAGCTCTACTCATTTAGCCCAATCTCCTGAATTGCACGCATCTCTTGAATCGCACGAGCTGTACAACATACCTATTACGAGGGGTGAAGGAACATTAATAACTGAACTGCGTAAGGTTATGGAGGAACTACGTGTGTCTTATTATGCTGACACAGATGAAGAAACTCGGGAGCAACTGAAACAGTTTTGGGATGATGAATTCAATGCAATATCATCTGGAGAAACAACTATTGAGAGAGATCTAAAGTGGATGCGGAAGGAGGTTATTGAGGCATTCGAGACATACAGTGAGGCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATACCATCATTATAATTTTACAATGAAGTCTAAGCGTCCTGATTCTGATTTGGAGTCTAGTACTAATTGTCCTGATTCTGATTTGGAGTCTAGTACTAATTTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGATGGAAAGAAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCATACTCTGGACTCTCTTTTGATGATGATGAATTCGATGCAATCTCTGAAGAAACAACTAAGGAGAAAGGTATAGAGTGGATGCGGGAGGAGGTTATTGAGGCATTCGAGACATACAGTAATGCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATACCATCATTATAATTTCACAATGAAGTCTAAGTGTCCTAATTCTGATTTGGAGTCTAGTACTAATGTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGACGGAGAGAAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCAGACTCTGGATTCTCTTTTGATCCAATCTAATTAGATCTATAGACTATAGAGTTGATCATACTGGATGGGTAGCGTTGCTGTGGGATAATTGTCTAATAAAACAGTAAATATGAGTTGTAAAAAAAATCTTACTTATTGTACGATTTTATTTTGTGTGGTTATATATTTTTTACCTTGATCAATTATTCAT]

[+] EMBL AK099294             [ACAGGGAAGCCGCCGCATCCCCAAATTCGCCGGCTTCCTCCCTCCCGAGCTAGGTTTCCGTCTCGCCGCCGCCGCCGCCGCCGCCCGCCTCCTTTTACTTTTTCCGCACCCCAATTCGCTCCGCTGCCCACCTCCTTTCCTTTTTCCGCTGCCAGCCGACTAGGGTTTCCGCCTCCTCGCCGGACGGACGCCGCGAACCCCCCCCCACACGGCCACACCTCGCGCCGGCTCCCTCCTCGCGTTCCGCTTCCCTCGCATTACAAGCGGCGCCGGTCCCGGATGGCGGAAGATGCCAATGCCGGTCGCAAGAGCTCTACTCATTTAGCCCAATCTCCTGAATTGCACGCATCTCTTGAATCGCACGAGCTGTACAACATACCTATTACGAGGGGTGAAGGAACATTAATAACTGAACTGCGTAAGGTTATGGAGGAACTACGTGTGTCTTATTATGCTGACACAGATGAAGAAACTCGGGAGCAACTGAAACAGTTTTGGGATGATGAATTCAATGCAATATCATCTGGAGAAACAACTATTGAGAGAGATCTAAAGTGGATGCGGAAGGAGGTTATTGAGGCATTCGAGACATACAGTGAGGCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATACCATCATTATAATTTTACAATGAAGTCTAAGCGTCCTGATTCTGATTTGGAGTCTAGTACTAATTGTCCTGATTCTGATTTGGAGTCTAGTACTAATTTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGATGGAAAGAAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCATACTCTGGACTCTCTTTTGATGATGATGAATTCGATGCAATCTCTGAAGAAACAACTAAGGAGAAAGGTATAGAGTGGATGCGGGAGGAGGTTATTGAGGCATTCGAGACATACAGTAATGCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATACCATCATTATAATTTCACAATGAAGTCTAAGTGTCCTAATTCTGATTTGGAGTCTAGTACTAATGTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGACGGAGAGAAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCAGACTCTGGATTCTCTTTTGATCCAATCTAATTAGATCTATAGACTATAGAGTTGATCATACTGGATGGGTAGCGTTGCTGTGGGATAATTGTCTAATAAAACAGTAAATATGAGTTGTAAAAAAAATCTTACTTATTGTACGATTTTATTTTGTGTGGTTATATATTTTT                    ]
[+] EMBL AK072078             [ CAGGGAAGCCGCCGCATCCCCAAATTCGCCGGCTTCCTCCCTCCCGAGCTAGGTTTCCGTCTCGCCGCCGCCGCCGCCGCCGCCCGCCTCCTTTTACTTTTTCCGCACCCCAATTCGCTCCGCTGCCCACCTCCTTTCCTTTTTCCGCTGCCAGCCGACTAGGGTTTCCGCCTCCTCGCCGGACGGACGCCGCGAA CCCCCCCCACACGGCCACACCTCGCGCCGGCTCCCTCCTCGCGTTCCGCTTCCCTCGCATTACAAGCGGCGCCGGTCCCGGATGGCGGAAGATGCCAATGCCGGTCGCAAGAGCTCTACTCATTTAGCCCAATCTCCTGAATTGCACGCATCTCTTGAATCGCACGAGCTGTACAACATACCTATTACGAGGGGTGAAGGAACATTAATAACTGAACTGCGTAAGGTTATGGAGGAACTACGTGTGTCTTATTATGCTGACACAGATGAAGAAACTCGGGAGCAACTGAAACAGTTTTGGGATGATGAATTCAATGCAATATCATCTGGAGAAACAACTATTGAGAGAGATCTAAAGTGGATGCGGAAGGAGGTTATTGAGGCATTCGAGACATACAGTGAGGCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATACCATCATTATAATTTTACAATGAAGTCTAAGCGTCCTGATTCTGATTTGGAGTCTAGTACTAATTGTCCTGATTCTGATTTGGAGTCTAGTACTAATTTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGATGGAAAGAAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCATACTCTGGACTCTCTTTTGATGATGATGAATTCGATGCAATCTCTGAAGAAACAACTAAGGAGAAAGGTATAGAGTGGATGCGGGAGGGGGTTATTGAGGCATTCGAGACATACAGTAATGCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATACCATCATTATAATTTCACAATGAAGTCTAAGTGTCCTAATTCTGATTTGGAGTCTAGTACTAATGTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGACGGAGAGAAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCAGACTCTGGATTCTCTTTTGATCCAATCTAATTAGATCTATAGACTATAGAGTTGATCATACTGGATGGGTAGCGTTGCTGTGGGATAATTGTCTAATAAAACAGTAAATATGAGTTGTAAAAAAAATCTTACTTATTGTACGATTTTATTTTGTGTGGTTATATATTTTTTACCTTGATCAATTATTCAT]


>consensus_2612#0 ACAGGGAAGCCGCCGCATCCCCAAATTCGCCGGCTTCCTCCCTCCCGAGCTAGGTTTCCG TCTCGCCGCCGCCGCCGCCGCCGCCCGCCTCCTTTTACTTTTTCCGCACCCCAATTCGCT CCGCTGCCCACCTCCTTTCCTTTTTCCGCTGCCAGCCGACTAGGGTTTCCGCCTCCTCGC CGGACGGACGCCGCGAACCCCCCCCCACACGGCCACACCTCGCGCCGGCTCCCTCCTCGC GTTCCGCTTCCCTCGCATTACAAGCGGCGCCGGTCCCGGATGGCGGAAGATGCCAATGCC GGTCGCAAGAGCTCTACTCATTTAGCCCAATCTCCTGAATTGCACGCATCTCTTGAATCG CACGAGCTGTACAACATACCTATTACGAGGGGTGAAGGAACATTAATAACTGAACTGCGT AAGGTTATGGAGGAACTACGTGTGTCTTATTATGCTGACACAGATGAAGAAACTCGGGAG CAACTGAAACAGTTTTGGGATGATGAATTCAATGCAATATCATCTGGAGAAACAACTATT GAGAGAGATCTAAAGTGGATGCGGAAGGAGGTTATTGAGGCATTCGAGACATACAGTGAG GCTAATGTAGTTGATTATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGAT TGTGGTCAGCCATACCATCATTATAATTTTACAATGAAGTCTAAGCGTCCTGATTCTGAT TTGGAGTCTAGTACTAATTGTCCTGATTCTGATTTGGAGTCTAGTACTAATTTGGAGAGT TGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGATGGAAAGAAACATTATTTT TGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGGAATTCTGGCATT GATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCATACTCTGGACTCTCT TTTGATGATGATGAATTCGATGCAATCTCTGAAGAAACAACTAAGGAGAAAGGTATAGAG TGGATGCGGGAGGAGGTTATTGAGGCATTCGAGACATACAGTAATGCTAATGTAGTTGAT TATGAGCTTGAAGATCTTTCTCGTCAGTGCTTGATTTTTGATGATTGTGGTCAGCCATAC CATCATTATAATTTCACAATGAAGTCTAAGTGTCCTAATTCTGATTTGGAGTCTAGTACT AATGTGGAGAGTTGCATTTCTCGTCACTATTTTGCTGAAGTTAAACTTATGGACGGAGAG AAACATTATTTTTGTTGTCCATTGGAGTCGTTTGACAATGGTCATTGTCATGGATGCCGG AATTCTGGCATTGATCTGAAGCATCCTTCAAACGGTGGTTATGAGGAGGGCAACGCAGAC TCTGGATTCTCTTTTGATCCAATCTAATTAGATCTATAGACTATAGAGTTGATCATACTG GATGGGTAGCGTTGCTGTGGGATAATTGTCTAATAAAACAGTAAATATGAGTTGTAAAAA AAATCTTACTTATTGTACGATTTTATTTTGTGTGGTTATATATTTTTTACCTTGATCAAT TATTCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)