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Oryza sativa
cluster # 2618 cluster # 2618       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2618#0 length = 1634 sequences # 2  

consensusID : consensus_2618#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1634
fasta sequence
                              [CTGGACGCCGGCAACTTCACGGAGGTGGTGGGGGCGCACGACTTCATCGTCGTCGAGTTCTACGCCCCATGGTGTGGCCACTGCAACCAGCTTGCTCCGGAGTACGAGGCGGCCGCCGCCGCCCTGCGCTCGCACGACCCGCCGGTCGTCCTCGCCAAGGTCGACGCCAGCGCCGACCTGAACCGGGGCCTCGCCGGCGAGCACGGCGTGCAGGGCTACCCCACCATCAGGATCCTCCGGGACCGCGGCGCCAGGTCGCACAACTACGCCGGGCCCCGGGACGCCGCCGGCATCGTCGCCTACCTCAAGAGGCAGGCCGGCCCGGCCTCCGTCGAGATCGCTGCCTCCGCCTCGCCGCCAGCGGCCGACTCCATCGCCAACGACGGCGTGGTCGTCGTCGGAGTTTTCCCCGAACTTAGCGGCAGCGAGTTCGAGAGTTTCATGGCGGTGGCGGAGAAGATGAGGGCCGACTACGATTTCCGGCACACGACGGACGCCGGCGTCCTCCCACGGGGTGATCGGACGGTGAGGGGGCCTCTCGTCCGCCTCTTCAAGCCCTTCGACGAGCTCTTCGTTGACTCGCAGGATTTTGATAGAGATGCGTTGGAGAAGTTTATCGAGTCTTCTGGTTTCCCTACAGTGGTTACCTTTGACACTAGTCCGGCAAACCAGAAATACCTTCTGAAATACTTCGACAATGCCGGCACCAAAGCGATGCTTTTCCTGAGCTTCAGTGATGACAGAGCAGAGGAATTCAGAACTCAGTTCCATGAAGCTGCAAATCAATACAGCGCAAACAACATAAGCTTTCTGATTGGTGATGTCACTGCCTCTCAGGGTGCTTTCCAGTATTTTGGGCTTAAAGAGAGTGAAGTGCCCCTCGTTTTCATACTAGCATCGAAGTCGAAGTATATCAAACCAACTGTGGAGCCTGATCAGATCTTGCCCTACCTGAAGGAATTTACAGAAGGAACATTGGCACCCCATGTTAAATCAGAACCCATTCCGGAGGTTAACGATCAGCCTGTTAAGACCGTTGTTGCTGACAATCTTCGAGAGGTGGTTTTCAACTCCGGCAAAAACGTTCTGCTCGAGTTCTATGCTCCATGGTGTGGACATTGTCAGAAGCTGGCCCCGATCTTGGAAGAGGTTGCAGTTTCATTGAAAGATGATGAAGACGTCGTCATAGCAAAGATGGATGGTACTGCCAACGATGTACCGTCAGATTTCGCGGTGGAGGGGTACCCAAGCATGTACTTCTACTCGTCTGGGGGGAACCTCCTGCCCTACGACGGGAGGACAGCCGAGGAGATCATCGATTTCATCACCAAGAACAAGGGCTCCAGGCCTGGGGAAGCAACCACGACTGAATCTGTCAAGGATGAACTGTGATGGCCACTTGGGGGAGTGGGGAGCTTCAGGTTAGGAGGTGCAGTGCAGCTGACAGCTTGAGGACATAGCTCAGTACTGAATTTAATCTTGTATTCGAGTTCCAGGTTTCCAAGTACATGTAGCATTACCAATGGTTTCATACATACATGTCCCCCCCCTTTTTTTTTTTTTTTTGCACCGCTGAAATCTGTTATTGTAACATCATTACACTACATCGAATAATCCCCATTTTAGCTTGCCAA]

[+] EMBL AK073161             [CTGGACGCCGGCAACTTCACGGAGGTGGTGGGGGCGCACGACTTCATCGTCGTCGAGTTCTACGCCCCATGGTGTGGCCACTGCAACCAGCTTGCTCCGGAGTACGAGGCGGCCGCCGCCGCCCTGCGCTCGCACGACCCGCCGGTCGTCCTCGCCAAGGTCGACGCCAGCGCCGACCTGAACCGGGGCCTCGCCGGCGAGCACGGCGTGCAGGGCTACCCCACCATCAGGATCCTCCGGGACCGCGGCGCCAGGTCGCACAACTACGCCGGGCCCCGGGACGCCGCCGGCATCGTCGCCTACCTCAAGAGGCAGGCCGGCCCGGCCTCCGTCGAGATCGCTGCCTCCGCCTCGCCGCCAGCGGCCGACTCCATCGCCAACGACGGCGTGGTCGTCGTCGGAGTTTTCCCCGAACTTAGCGGCAGCGAGTTCGAGAGTTTCATGGCGGTGGCGGAGAAGATGAGGGCCGACTACGATTTCCGGCACACGACGGACGCCGGCGTCCTCCCACGGGGTGATCGGACGGTGAGGGGGCCTCTCGTCCGCCTCTTCAAGCCCTTCGACGAGCTCTTCGTTGACTCGCAGGATTTTGATAGAGATGCGTTGGAGAAGTTTATCGAGTCTTCTGGTTTCCCTACAGTGGTTACCTTTGACACTAGTCCGGCAAACCAGAAATACCTTCTGAAATACTTCGACAATGCCGGCACCAAAGCGATGCTTTTCCTGAGCTTCAGTGATGACAGAGCAGAGGAATTCAGAACTCAGTTCCATGAAGCTGCAAATCAATACAGCGCAAACAACATAAGCTTTCTGATTGGTGATGTCACTGCCTCTCAGGGTGCTTTCCAGTATTTTGGGCTTAAAGAGAGTGAAGTGCCCCTCGTTTTCATACTAGCATCGAAGTCGAAGTATATCAAACCAACTGTGGAGCCTGATCAGATCTTGCCCTACCTGAAGGAATTTACAGAAGGAACATTGGCACCCCATGTTAAATCAGAACCCATTCCGGAGGTTAACGATCAGCCTGTTAAGACCGTTGTTGCTGACAATCTTCGAGAGGTGGTTTTCAACTCCGGCAAAAACGTTCTGCTCGAGTTCTATGCTCCATGGTGTGGACATTGTCAGAAGCTGGCCCCGATCTTGGAAGAGGTTGCAGTTTCATTGAAAGATGATGAAGACGTCGTCATAGCAAAGATGGATGGTACTGCCAACGATGTACCGTCAGATTTCGCGGTGGAGGGGTACCCAAGCATGTACTTCTACTCGTCTGGGGGGAACCTCCTGCCCTACGACGGGAGGACAGCCGAGGAGATCATCGATTTCATCACCAAGAACAAGGGCTCCAGGCCTGGGGAAGCAACCACGACTGAATCTGTCAAGGATGAACTGTGATGGCCACTTGGGGGAGTGGGGAGCTTCAGGTTAGGAGGTGCAGTGCAGCTGACAGCTTGAGGACATAGCTCAGTACTGAATTTAATCTTGTATTCGAGTTCCAGGTTTCCAAGTACATGTAGCATTACCAATGGTTTCATACATACATGTCCCCCCCCTTTTTTTTTTTTTTTTGCACCGCTGAAATCTGTTATTGTAACATCATTACACTACATCGAATAATCCCCATTTTAGCTTGCCAA]
[+] EMBL AK072252             [CTGGACGCCGGCAACTTCACGGAGGTGGTGGGGGCGCACGACTTCATCGTCGTCGAGTTCTACGCCCCATGGTGTGGCCACTGCAACCAGCTTGCTCCGGAGTACGAGGCGGCCGCCGCCGCCCTGCGCTCGCACGACCCGCCGGTCGTCCTCGCCAAGGTCGACGCCAGCGCCGACCTGAACCGGGGCCTCGCCGGCGAGCACGGCGTGCAGGGCTACCCCACCATCAGGATCCTCCGGGACCGCGGCGCCAGGTCGCACAACTACGCCGGGCCCCGGGACGCCGCCGGCATCGTCGCCTACCTCAAGAGGCAGGCCGGCCCGGCCTCCGTCGAGATCGCTGCCTCCGCCTCGCCGCCAGCGGCCGACTCCATCGCCAACGACGGCGTGGTCGTCGTCGGAGTTTTCCCCGAACTTAGCGGCAGCGAGTTCGAGAGTTTCATGGCGGTGGCGGAGAAGATGAGGGCCGACTACGATTTCCGGCACACGACGGACGCCGGCGTCCTCCCACGGGGTGATCGGACGGTGAGGGGGCCTCTCGTCCGCCTCTTCAAGCCCTTCGACGAGCTCTTCGTTGACTCGCAGGATTTTGATAGAGATGCGTTGGAGAAGTTTATCGAGTCTTCTGGTTTCCCTACAGTGGTTACCTTTGACACTAGTCCGGCAAACCAGAAATACCTTCTGAAATACTTCGACAATGCCGGCACCAAAGCGATGCTTTTCCTGAGCTTCAGTGATGACAGAGCAGAGGAATACAGAACTCAGTTCCATGAAGCTGCAAATCAATACAGCGCAAACAACATAAGCTTTCTGATTGGTGATGTCACTGCCTCTCAGGGTGCTTTCCAGTATTTTGGGCTTAAAGAGAGTGAAGTGCCCCTCGTTTTCATACTAGCATCGAAGTCGAAGTATATCAAACCAACTGTGGAGCCTGATCAGATCTTGCCCTACCTGAAGGAATTTACAGAAGGAACATTGGCACCCCATGTTAAATCAGAACCCATTCCGGAGGTTAACGATCAGCCTGTTAAGACCGTTGTTGCTGACAATCTTCGAGAGGTGGTTTTCAACTCCGGCAAAAACGTTCTGCTCGAGTTCTATGCTCCATGGTGTGGACATTGTCAGAAGCTGGCCCCGATCTTGGAAGAGGTTGCAGTTTCATTGAAAGATGATGAAGACGTCGTCATAGCAAAGATGGATGGTACTGCCAACGATGTACCGTCAGATTTCGCGGTGGAGGGGTACCCAAGCATGTACTTCTACTCGTCTGGGGGGAACCTCCTGCCCTACGACGGGAGGACAGCCGAGGAGATCATCGATTTCATCACCAAGAACAAGGGCTCCAGGCCTGGGGAAGCAACCACGACTGAATCTGTCAAGGATGAACTGTGATGGCCACTTGGGGGAGTGGGGAGCTTCAGGTTAGGAGGTGCAGTGCAGCTGACAGCTTGAGGACATAGCTCAGTACTGAATTTAATCTTGTATTCGAGTTCCAGGTTTCCAAGTACATGTAGCATTACCAATGGTTTCATACATACATGTCCCCCCCC  TTTTTTTTTTTTTTGCACCGCTGAAATCTGTTATTGTAACATCATTACACTACATCGAATAATCCCCATTTTAGCTTGCCAA]


>consensus_2618#0 CTGGACGCCGGCAACTTCACGGAGGTGGTGGGGGCGCACGACTTCATCGTCGTCGAGTTC TACGCCCCATGGTGTGGCCACTGCAACCAGCTTGCTCCGGAGTACGAGGCGGCCGCCGCC GCCCTGCGCTCGCACGACCCGCCGGTCGTCCTCGCCAAGGTCGACGCCAGCGCCGACCTG AACCGGGGCCTCGCCGGCGAGCACGGCGTGCAGGGCTACCCCACCATCAGGATCCTCCGG GACCGCGGCGCCAGGTCGCACAACTACGCCGGGCCCCGGGACGCCGCCGGCATCGTCGCC TACCTCAAGAGGCAGGCCGGCCCGGCCTCCGTCGAGATCGCTGCCTCCGCCTCGCCGCCA GCGGCCGACTCCATCGCCAACGACGGCGTGGTCGTCGTCGGAGTTTTCCCCGAACTTAGC GGCAGCGAGTTCGAGAGTTTCATGGCGGTGGCGGAGAAGATGAGGGCCGACTACGATTTC CGGCACACGACGGACGCCGGCGTCCTCCCACGGGGTGATCGGACGGTGAGGGGGCCTCTC GTCCGCCTCTTCAAGCCCTTCGACGAGCTCTTCGTTGACTCGCAGGATTTTGATAGAGAT GCGTTGGAGAAGTTTATCGAGTCTTCTGGTTTCCCTACAGTGGTTACCTTTGACACTAGT CCGGCAAACCAGAAATACCTTCTGAAATACTTCGACAATGCCGGCACCAAAGCGATGCTT TTCCTGAGCTTCAGTGATGACAGAGCAGAGGAATTCAGAACTCAGTTCCATGAAGCTGCA AATCAATACAGCGCAAACAACATAAGCTTTCTGATTGGTGATGTCACTGCCTCTCAGGGT GCTTTCCAGTATTTTGGGCTTAAAGAGAGTGAAGTGCCCCTCGTTTTCATACTAGCATCG AAGTCGAAGTATATCAAACCAACTGTGGAGCCTGATCAGATCTTGCCCTACCTGAAGGAA TTTACAGAAGGAACATTGGCACCCCATGTTAAATCAGAACCCATTCCGGAGGTTAACGAT CAGCCTGTTAAGACCGTTGTTGCTGACAATCTTCGAGAGGTGGTTTTCAACTCCGGCAAA AACGTTCTGCTCGAGTTCTATGCTCCATGGTGTGGACATTGTCAGAAGCTGGCCCCGATC TTGGAAGAGGTTGCAGTTTCATTGAAAGATGATGAAGACGTCGTCATAGCAAAGATGGAT GGTACTGCCAACGATGTACCGTCAGATTTCGCGGTGGAGGGGTACCCAAGCATGTACTTC TACTCGTCTGGGGGGAACCTCCTGCCCTACGACGGGAGGACAGCCGAGGAGATCATCGAT TTCATCACCAAGAACAAGGGCTCCAGGCCTGGGGAAGCAACCACGACTGAATCTGTCAAG GATGAACTGTGATGGCCACTTGGGGGAGTGGGGAGCTTCAGGTTAGGAGGTGCAGTGCAG CTGACAGCTTGAGGACATAGCTCAGTACTGAATTTAATCTTGTATTCGAGTTCCAGGTTT CCAAGTACATGTAGCATTACCAATGGTTTCATACATACATGTCCCCCCCCTTTTTTTTTT TTTTTTGCACCGCTGAAATCTGTTATTGTAACATCATTACACTACATCGAATAATCCCCA TTTTAGCTTGCCAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)