cluster # 2623

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Oryza sativa
cluster # 2623 cluster # 2623 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2623#0 length = 910 sequences # 2

consensusID : consensus_2623#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 910
fasta sequence

                              [CACCACGGGGAGTCGTGCGCGGCGCACGCGGCGGGGAACCTGTGCCAGAGCTTCCTGCTCTCCTACGGCGTCCGGGTCGGCATCGGCATCCTCCTCCGCGCCTTCAAGCTCGCCCGCCGCAGATCCTACTCCTCCCTCCTCGACCTCAAGCAACTGGTTTCGGAGAAAGATCTAATAGTGAGGGAGGAAGCTTGCCGGGTAGGATTACTTTTTGGAGGATTCACTGGATCATATCATGCACTTCGGATGTTTCCTTCGGAGATTTCGGAAAAAGGAAACACCATTTAATGCAATATTAGCAGGTTCGGTGGCAGGCTTGGCGATAGTAGCGCTAGATGATTCAAGTAGGAGGCGCACCCTTTCTCTATATCTTCTGGCAAGGCTTGCCCAGTGTGCATATAATTCTGCAAAGTCTAAGAACAGATTTCACTTTTGGGGAAGCCATTGGAGGCATGGAGATGCATTACTTTTTTCACTTGCGTCTGCCCAGGTTATGTATTCTTTCGTTATGAGGCCTGAAAGCTTACCTAAATCGTACCAAGACTTCATCCAAAAGACTGGACCAGTTGCGGAACCTGTTTACAAGGCTGTAAGAGATTGCTGCAGAGGTGGTCATGTGGATCTCATTGGTCTCTCAGCCTATTTAGCTAACAAGAAGAATTCAAATTTGAT-AAATTTAACAAAAAGTCCACCCATTATTCCATGTTCTGTGATACATCCTGACAGAGC-ATCGTGCTTGGCTCATAATGTCAGTGTCTCTTCATCAACGTTCAAG-AAAACATTCCCTCTGT-ATTTCTCATTGACATTTGNCCCAATTGTTGGTCTAAAGCCTTTCNAAAAGTTCCTTTGGAATCACCNAGTTGCAAACTTTGTTGGGCGAAGCCCTTTTTGGGGGGCNAATTCNGCTCTA]

[+] EMBL CB670029             [CACCACGGGGAGTCGTGCGCGGCGCACGCGGCGGGGAACCTGTGCCAGAGCTTCCTGCTCTCCTACGGCGTCCGGGTCGGCATCGGCATCCTCCTCCGCGCCTTCAAGCTCGCCCGCCGCAGATCCTACTCCTCCCTCCTCGACCTCAAGCAACTGGTTTCGGAGAAAGATCTAATAGTGAGGGAGGAAGCTTGCCGGGTAGGATTACTTTTTGGAGGATTCACTGGATCATATCATGCACTTCGGATGTTTCCTTCGGAGATTTCGGAAAAAGGAAACACCATTTAATGCAATATTAGCAGGTTCGGTGGCAGGCTTGGCGATAGTAGCGCTAGATGATTCAAGTAGGAGGCGCACCCTTTCTCTATATCTTCTGGCAAGGCTTGCCCAGTGTGCATATAATTCTGCAAAGTCTAAGAACAGATTTCACTTTTGGGGAAGCCATTGGAGGCATGGAGATGCATTACTTTTTTCACTTGCGTCTGCCCAGGTTATGTATTCTTTCGTTATGAGGCCTGAAAGCTTACCTAAATCGTACCAAGACTTCATCCAAAAGACTGGACCAGTTGCGGAACCTGTTTACAAGGCTGTAAGAGATTGCTGCAGAGGTGGTCATGTGGATCTCATTGGTCTCTCAGCCTATTTAGCTAACAAGAAGAATTCAAATTTGAT AAATTTAACAAAAAGTCCACCCATTATTCCATGTTCTGTGATACATCCTGACAGAGC ATCGTGCTTGGCTCATAATGTCAGTGTCTCTTCATCAACGTTCAAG AAAACATTCCCTCTGT ATTTCTCATTGACATTT                                                                                                      ]
[+] EMBL AU077467             [                                                                    CGTCCGGGTCGGCATCGGCATCCTCCTCCGCGCCTTCAAGCTCGCCCGCCGCAGATCCTACTCCTCCCTCCTCGACCTCAAGCAACTGGTTTCGGAGAAAGATCTAATAGTNAGGGAGGAAGCTTGCCGGGTAGGATTACTTTTTGGAGGATTCACTGGATCATATCATGCACTTC GATGTTTCCTTCGGAGATTTCGGAAAAAGGAAACACCATTTAATGCAATATTAGCAGGTTCGGTGGCAGGCTTGGCGATAGTAGCGCTAGATGATTCAAGTAGGAGGCGCACCCTTTCTCTATATCTTCTGGCAAGGCTTGCCCAGTGTGCATATAATTCTGCAAAGTCTAAGAACAGATTTCACTTTTGGGGAAGCCATTGGAGGCATGGAGATGCATTACTTTTTTCACTTGCGTCTGCCCAGGTTATGTATTCTTTCGTTATGAGGCCTGAAAGCTTACCTAAATCGTACCAAGACTTCATCCAAAAGACTGGACCAGTTGCGGAACCTGTTTACAAGGCTGTAAGAGATTGCTGCAGAGGTGGTCATGTGGATCTCATTGGTCTCTCAGCCTATTTAGCTAACAAGAAGAATTCAAATTTGATAAAATTTAACAAAAAGTCCANCCATTATTCCATGTTCTGTGATACATCCTGACAGAACAATCGTGCTTGGCTCATAATGTCAGTGTCTCTTCATCAACGTTCAAGAAAAACATTCCCTCTGTAATTCCCCATTGACATTGGNCCCAATTGTTGGTCTAAAGCCTTTCNAAAAGTTCCTTTGGAATCACCNAGTTGCAAACTTTGTTGGGCGAAGCCCTTTTTGGGGGGCNAATTCNGCTCTA]




>consensus_2623#0
CACCACGGGGAGTCGTGCGCGGCGCACGCGGCGGGGAACCTGTGCCAGAGCTTCCTGCTC
TCCTACGGCGTCCGGGTCGGCATCGGCATCCTCCTCCGCGCCTTCAAGCTCGCCCGCCGC
AGATCCTACTCCTCCCTCCTCGACCTCAAGCAACTGGTTTCGGAGAAAGATCTAATAGTG
AGGGAGGAAGCTTGCCGGGTAGGATTACTTTTTGGAGGATTCACTGGATCATATCATGCA
CTTCGGATGTTTCCTTCGGAGATTTCGGAAAAAGGAAACACCATTTAATGCAATATTAGC
AGGTTCGGTGGCAGGCTTGGCGATAGTAGCGCTAGATGATTCAAGTAGGAGGCGCACCCT
TTCTCTATATCTTCTGGCAAGGCTTGCCCAGTGTGCATATAATTCTGCAAAGTCTAAGAA
CAGATTTCACTTTTGGGGAAGCCATTGGAGGCATGGAGATGCATTACTTTTTTCACTTGC
GTCTGCCCAGGTTATGTATTCTTTCGTTATGAGGCCTGAAAGCTTACCTAAATCGTACCA
AGACTTCATCCAAAAGACTGGACCAGTTGCGGAACCTGTTTACAAGGCTGTAAGAGATTG
CTGCAGAGGTGGTCATGTGGATCTCATTGGTCTCTCAGCCTATTTAGCTAACAAGAAGAA
TTCAAATTTGATAAATTTAACAAAAAGTCCACCCATTATTCCATGTTCTGTGATACATCC
TGACAGAGCATCGTGCTTGGCTCATAATGTCAGTGTCTCTTCATCAACGTTCAAGAAAAC
ATTCCCTCTGTATTTCTCATTGACATTTGNCCCAATTGTTGGTCTAAAGCCTTTCNAAAA
GTTCCTTTGGAATCACCNAGTTGCAAACTTTGTTGGGCGAAGCCCTTTTTGGGGGGCNAA
TTCNGCTCTA

clustalw multiple alignements is not computed in this case