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Oryza sativa
cluster # 2625 cluster # 2625       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2625#0 length = 2501 sequences # 2  

consensusID : consensus_2625#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2501
fasta sequence
                              [CCGAGGCCGACCGAGCCCAACGGACGCGGTGTGCCGGTGCCCGGTGATTCATCTCTCAGCGCGGCACGACGGCACGAGCACACGCCGCGGTGGTAGTGTAGCTGCTACTACCGAGCCGTCGCGGCGTCGTCTACTTTGCCGCGCGTGCCGATCCCCACGCGTACGCGCAGCGCATGCACCACCAGCAGCTCAAACCGGGCGAGGCCGCCTCGCTCCCGCGCCACCTCCTCGAGGCCCACGTCGTCGCGCTCGTCCGCCGATGCTGCCCGGGCCTCCTCGCGCTCCGCGCCGCACACGCGCGCCTCATCAGGCTCCGCCTCCCTCGCCTCACAGCCGCCTTCGCGCTCTCCAAGCTCCTCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGGCGCCGCGCCATCCTACGCCCGCAACCTGTTCGACCAAATCCCCGAGCCGACCGCCTTCTGCTACAACTCCCTCATCCGCGCGCTCTCCTCCGCCGCCGGCGCCGCCCCGGCCGCGGACACCGTCCTGGTCTACCGCCGAATGCTGCGCGCCGGGTCCCCGCTCCCCAACTCCTTCACGCTCGCGTTCGCGCTCAAGGCGTGCTCCGTCGTGCCGGCTCTCGGGGAGGGCCGGCAGCTGCATTCGCAGGCTTTCCGCCGGGGGCTTGAACCGAGCCCCTACGTGCAGACCGGGCTGCTTAACCTCTATGCCAAGTGCGAGGAGGTTGCGCTCGCCAGGACAGTGTTCGATGACATGGTTGGGGACAAGAATTTGGCCGCGTGGAGTGCCATGATCGGCGGGTACTCCAGGGTCGGGATGGTTAACGAGGCTTTGGGGCTGTTCCGAGAGATGCAGGCAGCAGATGTGAACCCGGATGAGGTCACCATGGTTGGTGTCATTTCGGCATGCGCCAAGGCAGGGGCGCTTGATTTGGGGAGATGGGTGCATGCTTTTATCGATAGGAAAGGTATCACAGTCGATCTTGAGCTGAGCACAGCATTAATTGATATGTATGCAAAGTGTGGGTTGATAGAGCGGGCAAAGGGAGTGTTTGATGCAATGGCGGAGAGAGATACAAAGGCATGGAGTGCAATGATCGTTGGATTGGCGATACATGGTCTTGTAGAGGTTGCCTTGAAGCTTTTCTCAAGAATGCTAGAGCTTAAGGTGAGGCCTAACAATGTCACCTTTATAGGTGTGTTGTCAGCCTGTGCTCACAGTGGGTTAGTGAATGAAGGCCGACGATATTGGTCTACTATGCAAGAATTGGGTATCAAACCTTCAATGGAGAACTATGGTTGCATGGTTGACCTTTTCTGTCGTTCTAGCCTTTTGGATGAAGCATATTCATTTGTTACTGGCATGGCTATCCCTCCAAATTCAGTAATTTGGAGGACTCTTCTTGTTGCCAGTAAGAACTCAAATAGATTTGATATAGTGCAATCAGCATCAAAGAAGCTCCTTGAGTTAGAACCTTGCAATCCAGAAAACTATGTTCTACTCTCAAATTTGTACGCATCGAATTCCCAGTGGGATAGAGTAAGCTATATGAGGAAAAAGATGAAGGAAAACAATGTTAATGTTGTTGCTGGCTGTAGTTCGATTGAAATTAATGGTTACCTTCACAAGTTTGTGGTGAGTGATGATTCACACCCTGAAATAAAGGAGATAAGACTGTTACTGAGGGAAATAGCTGACCGTGTGGTACGTGCTGGCCACAAGCCTTGGACTGCAGCCGTGCTTCATGATGTTGGTGAAGAGGAAAAAGAAGTTGCACTTTGTGAGCACAGTGAAAGGTTAGCCATTGCATATGGTTTGTTGAAGACAAAAGCGCCTCACGTCATTCGGGTGGTAAAGAATTTGAGATTCTGTCCAGATTGCCATGAAGTAGCAAAAATAGTAAGCAAGTCATATGATAGAGAAATCATTGTTAGGGACCGTGTTCGTTTCCATAGATTTGTTGAGGGAAGTTGTTCTTGCAAGGACTTTTGGTGATTCCTCAACCGATTGAATATTGTCCCACAGCTGGGGGTGAGGGATGTGGCGTTGAAACTCTTTGGAGTCCATCACCAAACAATAATGACTACTGATCACTGAGCATAATTTGGTATCCAGATAAAAAGGAATCCTGGAACTGACTGGACCCTCTTGCCCTGATACAAGTATACAACCTCTCAAGGCATGGTTCATGGCTGCCCGCTCTAACTGGTAATGCAACTACAATGTCAATTGTTGGCGTCTACAGCACAGCAAGACAGATTTTCCGTTAATTGGAGATCAAGACAGCCTGTTTTAAGACACCAGAAAGCCAAGAAAAGAGGCTTTCCACAGTTCTGATGTTAACTTTACAATAAATAGAAAGTGTCTTGATGTCAAGAGTTAGTTAGAATTCTGAACAACAGGGCAGATAATTCTGAAAATATTTTTTTTATGTAAATTGAGAGGAAAAACGATAACAGGGGATGCCTTTTTCCAGTTGCTCTTTATTACGGGCTGAAAAAAAAAAAA]

[+] EMBL AK103158             [CCGAGGCCGACCGAGCCCAACGGACGCGGTGTGCCGGTGCCCGGTGATTCATCTCTCAGCGCGGCACGACGGCACGAGCACACGCCGCGGTGGTAGTGTAGCTGCTACTACCGAGCCGTCGCGGCGTCGTCTACTTTGCCGCGCGTGCCGATCCCCACGCGTACGCGCAGCGCATGCACCACCAGCAGCTCAAACCGGGCGAGGCCGCCTCGCTCCCGCGCCACCTCCTCGAGGCCCACGTCGTCGCGCTCGTCCGCCGATGCTGCCCGGGCCTCCTCGCGCTCCGCGCCGCACACGCGCGCCTCATCAGGCTCCGCCTCCCTCGCCTCACAGCCGCCTTCGCGCTCTCCAAGCTCCTCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGGCGCCGCGCCATCCTACGCCCGCAACCTGTTCGACCAAATCCCCGAGCCGACCGCCTTCTGCTACAACTCCCTCATCCGCGCGCTCTCCTCCGCCGCCGGCGCCGCCCCGGCCGCGGACACCGTCCTGGTCTACCGCCGAATGCTGCGCGCCGGGTCCCCGCTCCCCAACTCCTTCACGCTCGCGTTCGCGCTCAAGGCGTGCTCCGTCGTGCCGGCTCTCGGGGAGGGCCGGCAGCTGCATTCGCAGGCTTTCCGCCGGGGGCTTGAACCGAGCCCCTACGTGCAGACCGGGCTGCTTAACCTCTATGCCAAGTGCGAGGAGGTTGCGCTCGCCAGGACAGTGTTCGATGACATGGTTGGGGACAAGAATTTGGCCGCGTGGAGTGCCATGATCGGCGGGTACTCCAGGGTCGGGATGGTTAACGAGGCTTTGGGGCTGTTCCGAGAGATGCAGGCAGCAGATGTGAACCCGGATGAGGTCACCATGGTTGGTGTCATTTCGGCATGCGCCAAGGCAGGGGCGCTTGATTTGGGGAGATGGGTGCATGCTTTTATCGATAGGAAAGGTATCACAGTCGATCTTGAGCTGAGCACAGCATTAATTGATATGTATGCAAAGTGTGGGTTGATAGAGCGGGCAAAGGGAGTGTTTGATGCAATGGCGGAGAGAGATACAAAGGCATGGAGTGCAATGATCGTTGGATTGGCGATACATGGTCTTGTAGAGGTTGCCTTGAAGCTTTTCTCAAGAATGCTAGAGCTTAAGGTGAGGCCTAACAATGTCACCTTTATAGGTGTGTTGTCAGCCTGTGCTCACAGTGGGTTAGTGAATGAAGGCCGACGATATTGGTCTACTATGCAAGAATTGGGTATCAAACCTTCAATGGAGAACTATGGTTGCATGGTTGACCTTTTCTGTCGTTCTAGCCTTTTGGATGAAGCATATTCATTTGTTACTGGCATGGCTATCCCTCCAAATTCAGTAATTTGGAGGACTCTTCTTGTTGCCAGTAAGAACTCAAATAGATTTGATATAGTGCAATCAGCATCAAAGAAGCTCCTTGAGTTAGAACCTTGCAATCCAGAAAACTATGTTCTACTCTCAAATTTGTACGCATCGAATTCCCAGTGGGATAGAGTAAGCTATATGAGGAAAAAGATGAAGGAAAACAATGTTAATGTTGTTGCTGGCTGTAGTTCGATTGAAATTAATGGTTACCTTCACAAGTTTGTGGTGAGTGATGATTCACACCCTGAAATAAAGGAGATAAGACTGTTACTGAGGGAAATAGCTGACCGTGTGGTACGTGCTGGCCACAAGCCTTGGACTGCAGCCGTGCTTCATGATGTTGGTGAAGAGGAAAAAGAAGTTGCACTTTGTGAGCACAGTGAAAGGTTAGCCATTGCATATGGTTTGTTGAAGACAAAAGCGCCTCACGTCATTCGGGTGGTAAAGAATTTGAGATTCTGTCCAGATTGCCATGAAGTAGCAAAAATAGTAAGCAAGTCATATGATAGAGAAATCATTGTTAGGGACCGTGTTCGTTTCCATAGATTTGTTGAGGGAAGTTGTTCTTGCAAGGACTTTTGGTGATTCCTCAACCGATTGAATATTGTCCCACAGCTGGGGGTGAGGGATGTGGCGTTGAAACTCTTTGGAGTCCATCACCAAACAATAATGACTACTGATCACTGAGCATAATTTGGTATCCAGATAAAAAGGAATCCTGGAACTGACTGGACCCTCTTGCCCTGATACAAGTATACAACCTCTCAAGGCATGGTTCATGGCTGCCCGCTCTAACTGGTAATGCAACTACAATGTCAATTGTTGGCGTCTACAGCACAGCAAGACAGATTTTCCGTTAATTGGAGATCAAGACAGCCTGTTTTAAGACACCAGAAAGCCAAGAAAAGAGGCTTTCCACAGTTCTGATGTTAACTTTACAATAAATAGAAAGTGTCTTGATGTCAAGAGTTAGTTAGAATTCTGAACAACAGGGCAGATAATTCTGAAAATATTTTTTTTATGTAAATTGAGAGGAAAAACGATAACAGGGGAT                                            ]
[-] EMBL CA763190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAAGAATTTGAGATTCTGTCCAGATTGCCATGAAGTAGCAAAAATAGTAAGCAAGTCATATGATAGAGAAATCATTGTTAGGGACCGTGTTCGTTTCCATAGATTTGGTGAGGGAAGTTGTTCTTGCAAGGACTTTTGGTGATTCCTCAACCGATTGAATATTGTCCCACAGCTGGGGGTGAAGGATGTGGCGTTAAAACTTTTTGGAGTCCATCACCAAACAATAATGCCTACTGATCACTGAGCATAATTTGGTATCCAGATAAAAAGGAATCCTGGAACTGGCTGGGCCCTCTTGCCCTGATACAAGTATTCAACCTCTCAAGGCATGGTTCATGGCTGCCCGCTCTAACTGGTAATGCAACTACAACGTCAATTGTTGGGGTTTACAGCACAGCAAGACAGATTTTCCGTTAATTGGAGATCAAGACAGCCTGTTTTAAGACCCCAGAAAGCCAAGAAAAGAGGCTTTCCACAGTTTTGATGTTAACTTTACAATAAATAGAAAGTGTCTTGATGTCAAGAGTTAGTTAGAATTTTGAACAACAGGGCAGATAATTCTGAAAATATTTTTTTTATGTAAATTGAGAGGAAAAACGATAACAGGGGATGCCTTTTTCCAGTTGCTCTTTATTACGGGCTGAAAAAAAAAAAA]


>consensus_2625#0 CCGAGGCCGACCGAGCCCAACGGACGCGGTGTGCCGGTGCCCGGTGATTCATCTCTCAGC GCGGCACGACGGCACGAGCACACGCCGCGGTGGTAGTGTAGCTGCTACTACCGAGCCGTC GCGGCGTCGTCTACTTTGCCGCGCGTGCCGATCCCCACGCGTACGCGCAGCGCATGCACC ACCAGCAGCTCAAACCGGGCGAGGCCGCCTCGCTCCCGCGCCACCTCCTCGAGGCCCACG TCGTCGCGCTCGTCCGCCGATGCTGCCCGGGCCTCCTCGCGCTCCGCGCCGCACACGCGC GCCTCATCAGGCTCCGCCTCCCTCGCCTCACAGCCGCCTTCGCGCTCTCCAAGCTCCTCG CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGGCGCCGCGCCATCCTACGCCCGCAACC TGTTCGACCAAATCCCCGAGCCGACCGCCTTCTGCTACAACTCCCTCATCCGCGCGCTCT CCTCCGCCGCCGGCGCCGCCCCGGCCGCGGACACCGTCCTGGTCTACCGCCGAATGCTGC GCGCCGGGTCCCCGCTCCCCAACTCCTTCACGCTCGCGTTCGCGCTCAAGGCGTGCTCCG TCGTGCCGGCTCTCGGGGAGGGCCGGCAGCTGCATTCGCAGGCTTTCCGCCGGGGGCTTG AACCGAGCCCCTACGTGCAGACCGGGCTGCTTAACCTCTATGCCAAGTGCGAGGAGGTTG CGCTCGCCAGGACAGTGTTCGATGACATGGTTGGGGACAAGAATTTGGCCGCGTGGAGTG CCATGATCGGCGGGTACTCCAGGGTCGGGATGGTTAACGAGGCTTTGGGGCTGTTCCGAG AGATGCAGGCAGCAGATGTGAACCCGGATGAGGTCACCATGGTTGGTGTCATTTCGGCAT GCGCCAAGGCAGGGGCGCTTGATTTGGGGAGATGGGTGCATGCTTTTATCGATAGGAAAG GTATCACAGTCGATCTTGAGCTGAGCACAGCATTAATTGATATGTATGCAAAGTGTGGGT TGATAGAGCGGGCAAAGGGAGTGTTTGATGCAATGGCGGAGAGAGATACAAAGGCATGGA GTGCAATGATCGTTGGATTGGCGATACATGGTCTTGTAGAGGTTGCCTTGAAGCTTTTCT CAAGAATGCTAGAGCTTAAGGTGAGGCCTAACAATGTCACCTTTATAGGTGTGTTGTCAG CCTGTGCTCACAGTGGGTTAGTGAATGAAGGCCGACGATATTGGTCTACTATGCAAGAAT TGGGTATCAAACCTTCAATGGAGAACTATGGTTGCATGGTTGACCTTTTCTGTCGTTCTA GCCTTTTGGATGAAGCATATTCATTTGTTACTGGCATGGCTATCCCTCCAAATTCAGTAA TTTGGAGGACTCTTCTTGTTGCCAGTAAGAACTCAAATAGATTTGATATAGTGCAATCAG CATCAAAGAAGCTCCTTGAGTTAGAACCTTGCAATCCAGAAAACTATGTTCTACTCTCAA ATTTGTACGCATCGAATTCCCAGTGGGATAGAGTAAGCTATATGAGGAAAAAGATGAAGG AAAACAATGTTAATGTTGTTGCTGGCTGTAGTTCGATTGAAATTAATGGTTACCTTCACA AGTTTGTGGTGAGTGATGATTCACACCCTGAAATAAAGGAGATAAGACTGTTACTGAGGG AAATAGCTGACCGTGTGGTACGTGCTGGCCACAAGCCTTGGACTGCAGCCGTGCTTCATG ATGTTGGTGAAGAGGAAAAAGAAGTTGCACTTTGTGAGCACAGTGAAAGGTTAGCCATTG CATATGGTTTGTTGAAGACAAAAGCGCCTCACGTCATTCGGGTGGTAAAGAATTTGAGAT TCTGTCCAGATTGCCATGAAGTAGCAAAAATAGTAAGCAAGTCATATGATAGAGAAATCA TTGTTAGGGACCGTGTTCGTTTCCATAGATTTGTTGAGGGAAGTTGTTCTTGCAAGGACT TTTGGTGATTCCTCAACCGATTGAATATTGTCCCACAGCTGGGGGTGAGGGATGTGGCGT TGAAACTCTTTGGAGTCCATCACCAAACAATAATGACTACTGATCACTGAGCATAATTTG GTATCCAGATAAAAAGGAATCCTGGAACTGACTGGACCCTCTTGCCCTGATACAAGTATA CAACCTCTCAAGGCATGGTTCATGGCTGCCCGCTCTAACTGGTAATGCAACTACAATGTC AATTGTTGGCGTCTACAGCACAGCAAGACAGATTTTCCGTTAATTGGAGATCAAGACAGC CTGTTTTAAGACACCAGAAAGCCAAGAAAAGAGGCTTTCCACAGTTCTGATGTTAACTTT ACAATAAATAGAAAGTGTCTTGATGTCAAGAGTTAGTTAGAATTCTGAACAACAGGGCAG ATAATTCTGAAAATATTTTTTTTATGTAAATTGAGAGGAAAAACGATAACAGGGGATGCC TTTTTCCAGTTGCTCTTTATTACGGGCTGAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)