cluster # 2678

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Oryza sativa
cluster # 2678 cluster # 2678 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2678#0 length = 1021 sequences # 2

consensusID : consensus_2678#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1021
fasta sequence

                              [AAAATTCCCGCTCGCCCTCCTCCTTAATCCCGGCAGAGGAATCCATCCATCCATCCATCGCTCCTCCACCGGCAGCGACCACCGGCGAGAGCGAGCTCCTCTCCGGCTCCGGCTCCGGCCCTACCTCCCCTCCCCCCCACCGGTCAGGCCATGTCGCCCGCTCCGCCGCCGTCGCGCGGCCGCATCCGGCCGTGGCTGGTGGTGGGCGACCTGGTGGTGGCGGCGATGTGGGTGTGCGCGGGCGCGCTGGTGAAGCTCGCCGTGTACGGGGTGCTCGGCCTCGGTGGCCGCCCCGAGGCCGACGCCGTCAAGGTGGCGCTCTCCCTCGTCTACATGTTCTTCTTCGCCTGGCTCGAGGGCTTCACCGGCGGTGCCTCCTACAACCCGCTCACCGTCCTCGCCGGTGCCCTCGCATCCCGCGCCGGCCCCTCTCTCTACCTGTTCGCCGCCTTCGTACGGATGCCTGCGCAGGTGTTTGGGTCGATTCTTGGAGTGAAGCTCATCCGAGCAGCTCTCCCTAAAGTAGGCAAAGGAGCTCCGTTAAGCGTTGGAGTTCACCATGGAGCGTTAGCTGAAGGGTTGGCAACTTTCATGGTTGTTATAGTGTCGGTGACTCTTAAGAAGAAGGAGATGAAAGGGTTCTTTATGAAGACATGGATCTCGAGCATTTGGAAAATGACATTTCATCTCCTTAGCTCAGATATAACTGGAGGAGTCATGAACCCTGCATCTGCTTTTGCTTGGGCCTATGCTCGAGGGGATCACACGACATTCGACCACCTACTTGTATATTGGCTTGCACCCCTCCAAGCAACCTTGCTAGGAGTATGGGTCGTGACCTTATTAACTAAACCCAAGAAGATAGAGGAAGAAGCAGATGAAAGCAAAACCAAGAAGGAGTAGACTATTATTGATGTGGTAATGTTCGCCATTTATTGTGGAAGTGTGGAGCAAGAACTTCCATTTTTTTCACAGGCAAGACTGGTGTTGAACTTATACAGACAGGATCATTTTTATGCTG]

[+] EMBL CB680683             [AAAATTCCCGCTCGCCCTCCTCCTTAATCCCGGCAGAGGAATCCATCCATCCATCCATCGCTCCTCCACCGGCAGCGACCACCGGCGAGAGCGAGCTCCTCTCCGGCTCCGGCTCCGGCCCTACCTCCCCTCCCCCCCACCGGTCAGGCCATGTCGCCCGCTCCGCCGCCGTCGCGCGGCCGCATCCGGCCGTGGCTGGTGGTGGGCGACCTGGTGGTGGCGGCGATGTGGGTGTGCGCGGGCGCGCTGGTGAAGCTCGCCGTGTACGGGGTGCTCGGCCTCGGTGGCCGCCCCGAGGCCGACGCCGTCAAGGTGGCGCTCTCCCTCGTCTACATGTTCTTCTTCGCCTGGCTCGAGGGCTTCACCGGCGGTGCCTCCTACAACCCGCTCACCGTCCTCGCCGGTGCCCTCGCATCCCGCGCCGGCCCCTCTCTCTACCTGTTCGCCGCCTTCGTACGGATGCCTGCGCAGGTGTTTGGGTCGATTCTTGGAGTGAAGCTCATCCGAGCAGCTCTCCCTAAAGTAGGCAAAGGAGCTCCGTTAAGCGTTGGAGTTCACCATGGAGCGTTAGCTGAAGGGTTGGCAACTTTCATGGTTGTTATAGTGTCGGTGACTCTTAAGAAGAAGGAGATGAAAGGGTTCTTTATGAAGACATGGATCTCGAGCATTTGGAAAATGACATTTCATCTCCTTAGCTCAGATATAACTGGAGGAGTCATGAACCCTGCATCTGCT                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK071190             [                                         TCCATCCATCCATCCATCGCTCCTCCACCGGCAGCGACCACCGGCGAGAGCGAGCTCCTCTCCGGCTCCGGCTCCAGCCCTACCTCCCCTCCCCCCCACCGGTCAGGCCATGTCGCCCGCTCCGCCGCCGTCGCGCGGCCGCATCCGGCCGTGGCTGGTGGTGGGCGACCTGGTGGTGGCGGCGATGTGGGTGTGCGCGGGCGCGCTGGTGAAGCTCGCCGTGTACGGGGTGCTCGGCCTCGGTGGCCGCCCCGAGGCCGACGCCGTCAAGGTGGCGCTCTCCCTCGTCTACATGTTCTTCTTCGCCTGGCTCGAGGGCTTCACCGGCGGTGCCTCCTACAACCCGCTCACCGTCCTCGCCGGTGCCCTCGCATCCCGCGCCGGCCCCTCTCTCTACCTGTTCGCCGCCTTCGTACGGATGCCTGCGCAGGTGTTTGGGT GATTCTTGGAGTGAAGCTCATCCGAGCAGCTCTCCCTAAAGTAGGCAAAGGAGCTCCGTTAAGCGTTGGAGTTCACCATGGAGCGTTAGCTGAAGGGTTGGCAACTTTCATGGTTGTTATAGTGTCGGTGACTCTTAAGAAGAAGGAGATGAAAGGGTTCTTTATGAAGACATGGATCTCGAGCATTTGGAAAATGACATTTCATCTCCTTAGCTCAGATATAACTGGAGGAGTCATGAACCCTGCATCTGCTTTTGCTTGGGCCTATGCTCGAGGGGATCACACGACATTCGACCACCTACTTGTATATTGGCTTGCACCCCTCCAAGCAACCTTGCTAGGAGTATGGGTCGTGACCTTATTAACTAAACCCAAGAAGATAGAGGAAGAAGCAGATGAAAGCAAAACCAAGAAGGAGTAGACTATTATTGATGTGGTAATGTTCGCCATTTATTGTGGAAGTGTGGAGCAAGAACTTCCATTTTTTTCACAGGCAAGACTGGTGTTGAACTTATACAGACAGGATCATTTTTATGCTG]




>consensus_2678#0
AAAATTCCCGCTCGCCCTCCTCCTTAATCCCGGCAGAGGAATCCATCCATCCATCCATCG
CTCCTCCACCGGCAGCGACCACCGGCGAGAGCGAGCTCCTCTCCGGCTCCGGCTCCGGCC
CTACCTCCCCTCCCCCCCACCGGTCAGGCCATGTCGCCCGCTCCGCCGCCGTCGCGCGGC
CGCATCCGGCCGTGGCTGGTGGTGGGCGACCTGGTGGTGGCGGCGATGTGGGTGTGCGCG
GGCGCGCTGGTGAAGCTCGCCGTGTACGGGGTGCTCGGCCTCGGTGGCCGCCCCGAGGCC
GACGCCGTCAAGGTGGCGCTCTCCCTCGTCTACATGTTCTTCTTCGCCTGGCTCGAGGGC
TTCACCGGCGGTGCCTCCTACAACCCGCTCACCGTCCTCGCCGGTGCCCTCGCATCCCGC
GCCGGCCCCTCTCTCTACCTGTTCGCCGCCTTCGTACGGATGCCTGCGCAGGTGTTTGGG
TCGATTCTTGGAGTGAAGCTCATCCGAGCAGCTCTCCCTAAAGTAGGCAAAGGAGCTCCG
TTAAGCGTTGGAGTTCACCATGGAGCGTTAGCTGAAGGGTTGGCAACTTTCATGGTTGTT
ATAGTGTCGGTGACTCTTAAGAAGAAGGAGATGAAAGGGTTCTTTATGAAGACATGGATC
TCGAGCATTTGGAAAATGACATTTCATCTCCTTAGCTCAGATATAACTGGAGGAGTCATG
AACCCTGCATCTGCTTTTGCTTGGGCCTATGCTCGAGGGGATCACACGACATTCGACCAC
CTACTTGTATATTGGCTTGCACCCCTCCAAGCAACCTTGCTAGGAGTATGGGTCGTGACC
TTATTAACTAAACCCAAGAAGATAGAGGAAGAAGCAGATGAAAGCAAAACCAAGAAGGAG
TAGACTATTATTGATGTGGTAATGTTCGCCATTTATTGTGGAAGTGTGGAGCAAGAACTT
CCATTTTTTTCACAGGCAAGACTGGTGTTGAACTTATACAGACAGGATCATTTTTATGCT
G

clustalw multiple alignements is not computed in this case