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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2705 cluster # 2705       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2705#0 length = 1024 sequences # 2  

consensusID : consensus_2705#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1024
fasta sequence
                              [TGTGCGTTCTTGCTAGTGATGTTCATCTGTTCAGTTCTTGGAATTTACATTTTCTTTTCGAGTCCATGAAAGATCTGTTCTGAGGCTCTGAGGTTTTTGTCTCTGAATTTTCTGAACGTTTCTTTCCAAAAGATTGGTCCATTATCACTGAACATCTATCGAAAGAATCATTTCCAAATTTGAAAGAGGAAAATTAAGAGCCTGGATTATTCTGTTCGAGGTTTTGTTAATTGTCTCGATCGAGGGTAAATGATGACTGAAAAAGAATTCATTGTCGATGCAAAAAGGAGTGTGTTAATGATGGCGTCTCCATCTTGATTCTCCGTGAAAATGTTTATTTTGGGGACGCAATTATTTGACACGGCTGCAGAGCTGTCCGGGGTAATTAGGAAGCTATTGTTAGCCACTTAACGTGCAGAGTCTGTCCTCTCATTTTCAGTAGAGATATCTTCTCTCATGAAAAGCATTTAAACCCCAAGAACACTCTAAAACGTTTTTATACAACACCATAAGAAAAACATTTCTTTTTGGTGAAATAACAATGTAAAAGCCAACGCCAATTCTGCAAAATCTTTATAGTTTGCAACTATCGGAACAATCTTTGCAAAATATGCATTCCATGATGCTTCTCAATTATCAAACGAACAATCTTTGCAGAAGTGCAATCTTTGTTCTTTGAAGTTACTGAACAATCTTTGCAAAAATGCAGTCTTGATGCTTTACAGTTATTGAGCAATCTCTGCAAATGCGCAAACTTTATGCTTTGCAATTGCAGAACAATCTTTGGAAAATGCAAACTTGATGCTTTTCAATTATCGACCGAACAGTCTTCACTTCTTTACATAAGTGCAGTCATCTGCTTTGAATTTTTTGAACCGTCTTGCCAAAAATGCAGTCTTGATGCTTCATAGTACAATCTTTGCAGAAGCGCACTTTGCAAAAATTACAGTCTTTTCAAGAACGCAAACCTTGATGCTTTCCAATATTTGAACAATCCTTGCAAAAATGCAATGCTATCCAATCG]

[+] EMBL CB681906             [TGTGCGTTCTTGCTAGTGATGTTCATCTGTTCAGTTCTTGGAATTTACATTTTCTTTTCGAGTCCATGAAAGATCTGTTCTGAGGCTCTGAGGTTTTTGTCTCTGAATTTTCTGAACGTTTCTTTCCAAAAGATTGGTCCATTATCACTGAACATCTATCGAAAGAATCATTTCCAAATTTGAAAGAGGAAAATTAAGAGCCTGGATTATTCTGTTCGAGGTTTTGTTAATTGTCTCGATCGAGGGTAAATGATGACTGAAAAAGAATTCATTGTCGATGCAAAAAGGAGTGTGTTAATGATGGCGTCTCCATCTTGATTCTCCGTGAAAATGTTTATTTTGGGGACGCAATTATTTGACACGGCTGCAGAGCTGTCCGGGGTAATTAGGAAGCTATTGTTAGCCACTTAACGTGCAGAGTCTGTCCTCTCATTTTCAGTAGAGATATCTTCTCTCATGAAAAGCATTTAAACCCCAAGAACACTCTAAAACGTTTTTATACAACACCATAAGAAAAACATTTCTTTTTGGTGAAATAACAATGTAAAAGCCAACGCCAATTCTGCAAAATCTTTATAGTTTGCAACTATCGGAACAATCTTTGCAAAATATGCATTCCATGATGCTTCTCAATTATCAAACGAACAATCTTTGCAGAAGTGCAATCTTTGTTCTTTGAAGTTACTGAACAATCTTTGCAAAAATGCAGTCTTGATGCTTTACAGTTATTGAGCAATCTCTGCAAATGCGCAAACTT                                                                                                                                                                                                                                                                           ]
[-] EMBL CB681907             [                                                                                                                                                                                                                                                                                                                                                   tgGGGGACGCAATTATTTGACACGGCTGCAGAGCTGTCCGGGGTAATTAGGAAGCTATTGTTAGCCACTTAACGTGCAGTGTCTGTCCTCTCATTTTCAGTAGAGATATCTTCTCTCATGAAAAGCATTTAAACCCCAAGAACACTCTAAAACGTTTTTATACAACACCATAAGAAAAACATTTCTTTTTGGTGAAATAACAATGTAAAAGCCAACGCCAATTCTGCAAAATCTTTATAGTTTGCAACTATCGGAACAATCTTTGCAAAATATGCATTCCATGATGCTTCTCAATTATCAAACGAACAATCTTTGCAGAAGTGCAATCTTTGTTCTTTGAAGTTACTGAACAATCTTTGCAAAAATGCAGTCTTGATGCTTTACAGTTATTGAGCAATCTCTGCAAAGGCGCAAACTTTATGCTTTGCAATTGCAGAACAATCTTTGGAAAATGCAAACTTGATGCTTTTCAATTATCGACCGAACAGTCTTCACTTCTTTACATAAGTGCAGTCATCTGCTTTGAATTTTTTGAACCGTCTTGCCAAAAATGCAGTCTTGATGCTTCATAGTACAATCTTTGCAGAAGCGCACTTTGCAAAAATTACAGTCTTTTCAAGAACGCAAACCTTGATGCTTTCCAATATTTGAACAATCCTTGCAAAAATGCAATGCTATCCAATCG]


>consensus_2705#0 TGTGCGTTCTTGCTAGTGATGTTCATCTGTTCAGTTCTTGGAATTTACATTTTCTTTTCG AGTCCATGAAAGATCTGTTCTGAGGCTCTGAGGTTTTTGTCTCTGAATTTTCTGAACGTT TCTTTCCAAAAGATTGGTCCATTATCACTGAACATCTATCGAAAGAATCATTTCCAAATT TGAAAGAGGAAAATTAAGAGCCTGGATTATTCTGTTCGAGGTTTTGTTAATTGTCTCGAT CGAGGGTAAATGATGACTGAAAAAGAATTCATTGTCGATGCAAAAAGGAGTGTGTTAATG ATGGCGTCTCCATCTTGATTCTCCGTGAAAATGTTTATTTTGGGGACGCAATTATTTGAC ACGGCTGCAGAGCTGTCCGGGGTAATTAGGAAGCTATTGTTAGCCACTTAACGTGCAGAG TCTGTCCTCTCATTTTCAGTAGAGATATCTTCTCTCATGAAAAGCATTTAAACCCCAAGA ACACTCTAAAACGTTTTTATACAACACCATAAGAAAAACATTTCTTTTTGGTGAAATAAC AATGTAAAAGCCAACGCCAATTCTGCAAAATCTTTATAGTTTGCAACTATCGGAACAATC TTTGCAAAATATGCATTCCATGATGCTTCTCAATTATCAAACGAACAATCTTTGCAGAAG TGCAATCTTTGTTCTTTGAAGTTACTGAACAATCTTTGCAAAAATGCAGTCTTGATGCTT TACAGTTATTGAGCAATCTCTGCAAATGCGCAAACTTTATGCTTTGCAATTGCAGAACAA TCTTTGGAAAATGCAAACTTGATGCTTTTCAATTATCGACCGAACAGTCTTCACTTCTTT ACATAAGTGCAGTCATCTGCTTTGAATTTTTTGAACCGTCTTGCCAAAAATGCAGTCTTG ATGCTTCATAGTACAATCTTTGCAGAAGCGCACTTTGCAAAAATTACAGTCTTTTCAAGA ACGCAAACCTTGATGCTTTCCAATATTTGAACAATCCTTGCAAAAATGCAATGCTATCCA ATCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)