cluster # 2708

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Oryza sativa
cluster # 2708 cluster # 2708 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2708#0 length = 2540 sequences # 2
consensusID : consensus_2708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2540
fasta sequence
                              [AAAACACCCACACGCACGACTTCTTCGTCGGCGTCGCCGCGCCGCCGCGCCGCCGCCGCCGCCTCCGGCCGGCCGGCCGCACCTCCACCACCGCACAGCACCTCTCAGCTCTCACCCGCGGGGAGAAGGGAGGAACACGGAGAAGGCTCAGACTCGCCAATTTCATGGAGATTGCATCTCGGCTGTGTTGATGCGTCGCCCATGCACCCACTCACCCTCTCCTCCACCGCCCTCCTCCGCCTCATCAAGTCGCTCTCGCCGGCGGTGCGTAGGGCCCACCTGTCGGCGTCCTCTATCCACTGCCTCCTCCTCAAGGCCGGCCTCCTCCACGTCGGCGCGCACCTCCCGACGGCGCTCCTCTCCGCGTATGCCGCCCTCGGCAGCCCGGATCACGCGCGCAGGCTGTTCGACGAAATGCCCGAGCAAGGCCTTGTCCCGCGAACCGCCATGGCCCGGGCGCACGTCGCGTCTGGGCAGGCGGCTCAAGCGATCGCCGTATTCGGGGACATGGTGGCGGATGGTGTCTTCCCGGACAATGTCGCCCTGGCAGTCGCGCTTGGGGCATGCCATGGCGCTGGCTCTTGGACGGCTAGGAGGAATCCAGGCAAGAAGATCCATGCTCTCATCGTGACCAGCGGCATTGAGCCAGATGTGTTTGTCTCCACCGAGCTGATAAGGGTCTACGGTGAGTGTGGCAAGCTGGCGGTTTCTAGGAGGGTGTTCGATGACATGCCGTCGAGGAGTACCATTACATGGAACGCCATGTTGCATCAGTATGCCAGGCACGGGAAAGTTGACACGGCTTATGAGCTGTTCCTCGCAATGCCGAGGAGAGATGTTGTGTCCTGGAACACAGTGATGGCCGGGTACTGTGTTGCTGGCCGGTGCAGGGAGGCACTTGGCTTGTTCCGTCAGATGGTGTCGCCGTCATCGTGTGCGGTGCATCCTAATGTGCCTACGATGAGCACTATCCTCGGTGCTTGTGCCGGCGCGGGTTGTTTGGAGACCGGGATTTGGGTCCATGCATATATTGAGAGGAACAGGATGAATGATGATGGCTATCTGGATCGGTGCCTGATAGACATGTACTGCAAATGCGGAAGCATCGATAATGCCCTACAGGTGTTTGAGAAGGCACCTAGGAAGAGGGACCTGTTCTCATGGACAACCGTGATCTGTGGGCTGGCAATGCACGGCCGCGCCACTGATGCTTTGAGAATGTTTGACATGATGCAGGATAATGGCATATGCCCGGATGATGTCACGCTTGTTGGGGTCCTAAATGCTTGTGCACATGGAGGTTTGGTAGACGAAGGTCTTGGCTACTTCTACTCCATGGAGGCAAAATTTAGAATCACACCCAAGATTGAACACTATGGTTGCATGATTGATCTTCTTGGCCGCGTTGGGCGACTGCAGGAAGCATATAGCATGATAAGAACAATGCCAATGGATCCCAACACGGTTATTTGGGGTGCATTCTTGAGCGCGTGCAAAGTTCATGGCAATATGGAACTCGGCAAGATTGCGGCAGAAGAGCTCACCAGGTTGGATCCAGATGACCCTTGGGGGAGAGTGATGCTGTCCAGCATGTACGCGAAAGCACAGGATTGGATTGGTCTTGCCCGGGAGAGGAGGGAGATGAACAGCATGCAGGTGAAGAAGACTCCTGGGTGCAGCTCGATCGAGCTCAAAGGCGAGGTGCATGAGTTTGTTGCTGGTGGCAGTCAGCATCCTCAGTATGCTGAGATTTGCAGTGTACTGCAAGATGTTGAAGCTCAAACAAATGTAGGTTGAGACACACAGCCTTCTGTTGAGCTTCTTGTGCTGCCAGGATTTCAGCACAGGTGCAATTTCCTCTGAGCCTTCACGAGAACGCTCCTTGCTTTGCACGTCGGCATGTGGAGAACCGAAGAGAAGATTAGCTAATTAGTCAGTTAAAATGCGAAGAACTGACAATTTTGCTCTGAATCCAATATAAACTTCAATATGCTGATTTTATGAGCTAGGGTTCAGAGTTTACACGGCCTAGAGGGTGGTGTCAGCTTGATTGGCATAAGAGGAGACAATCTAGTCGGATAAAGACCTTTGAGGGAGATGGAATAGATTAATACATCTTCATCGCTTGATTGCTAGTAATGGATACATGACACCCTTTTATAGGGCATGGCTTTGACTGGACAGCTGATACATGGAATAATAATCTCTGCTCAACAGCTGATGAAATTTCTTTTAACTTCGTCAATTTGAAGCGACGAAAGAATGTTGAAGCTAGTTTACACATGCATTCAACCTTTTCCCGTGAAGGCATACTGAGCATTGCACTCAGGAACCTCTTTCAGATTTTTTTAGTGTATTATTTACCCTTTTATGTGCTTTCCGTGCCTTAATGTTTGTCAGAGTGTTGATGGCATGGGCACAAGCACATTCTTTATTTGTTTTGTTTTCAAGGGTTAATTTGATCCATGCCACTGCAAATGTGGCAAATCAAAAAATATGCCACTACTATTGACGTTATCTATTGGTGCCACTATAAATTC]

[+] EMBL AK103144             [AAAACACCCACACGCACGACTTCTTCGTCGGCGTCGCCGCGCCGCCGCGCCGCCGCCGCCGCCTCCGGCCGGCCGGCCGCACCTCCACCACCGCACAGCACCTCTCAGCTCTCACCCGCGGGGAGAAGGGAGGAACACGGAGAAGGCTCAGACTCGCCAATTTCATGGAGATTGCATCTCGGCTGTGTTGATGCGTCGCCCATGCACCCACTCACCCTCTCCTCCACCGCCCTCCTCCGCCTCATCAAGTCGCTCTCGCCGGCGGTGCGTAGGGCCCACCTGTCGGCGTCCTCTATCCACTGCCTCCTCCTCAAGGCCGGCCTCCTCCACGTCGGCGCGCACCTCCCGACGGCGCTCCTCTCCGCGTATGCCGCCCTCGGCAGCCCGGATCACGCGCGCAGGCTGTTCGACGAAATGCCCGAGCAAGGCCTTGTCCCGCGAACCGCCATGGCCCGGGCGCACGTCGCGTCTGGGCAGGCGGCTCAAGCGATCGCCGTATTCGGGGACATGGTGGCGGATGGTGTCTTCCCGGACAATGTCGCCCTGGCAGTCGCGCTTGGGGCATGCCATGGCGCTGGCTCTTGGACGGCTAGGAGGAATCCAGGCAAGAAGATCCATGCTCTCATCGTGACCAGCGGCATTGAGCCAGATGTGTTTGTCTCCACCGAGCTGATAAGGGTCTACGGTGAGTGTGGCAAGCTGGCGGTTTCTAGGAGGGTGTTCGATGACATGCCGTCGAGGAGTACCATTACATGGAACGCCATGTTGCATCAGTATGCCAGGCACGGGAAAGTTGACACGGCTTATGAGCTGTTCCTCGCAATGCCGAGGAGAGATGTTGTGTCCTGGAACACAGTGATGGCCGGGTACTGTGTTGCTGGCCGGTGCAGGGAGGCACTTGGCTTGTTCCGTCAGATGGTGTCGCCGTCATCGTGTGCGGTGCATCCTAATGTGCCTACGATGAGCACTATCCTCGGTGCTTGTGCCGGCGCGGGTTGTTTGGAGACCGGGATTTGGGTCCATGCATATATTGAGAGGAACAGGATGAATGATGATGGCTATCTGGATCGGTGCCTGATAGACATGTACTGCAAATGCGGAAGCATCGATAATGCCCTACAGGTGTTTGAGAAGGCACCTAGGAAGAGGGACCTGTTCTCATGGACAACCGTGATCTGTGGGCTGGCAATGCACGGCCGCGCCACTGATGCTTTGAGAATGTTTGACATGATGCAGGATAATGGCATATGCCCGGATGATGTCACGCTTGTTGGGGTCCTAAATGCTTGTGCACATGGAGGTTTGGTAGACGAAGGTCTTGGCTACTTCTACTCCATGGAGGCAAAATTTAGAATCACACCCAAGATTGAACACTATGGTTGCATGATTGATCTTCTTGGCCGCGTTGGGCGACTGCAGGAAGCATATAGCATGATAAGAACAATGCCAATGGATCCCAACACGGTTATTTGGGGTGCATTCTTGAGCGCGTGCAAAGTTCATGGCAATATGGAACTCGGCAAGATTGCGGCAGAAGAGCTCACCAGGTTGGATCCAGATGACCCTTGGGGGAGAGTGATGCTGTCCAGCATGTACGCGAAAGCACAGGATTGGATTGGTCTTGCCCGGGAGAGGAGGGAGATGAACAGCATGCAGGTGAAGAAGACTCCTGGGTGCAGCTCGATCGAGCTCAAAGGCGAGGTGCATGAGTTTGTTGCTGGTGGCAGTCAGCATCCTCAGTATGCTGAGATTTGCAGTGTACTGCAAGATGTTGAAGCTCAAACAAATGTAGGTTGAGACACACAGCCTTCTGTTGAGCTTCTTGTGCTGCCAGGATTTCAGCACAGGTGCAATTTCCTCTGAGCCTTCACGAGAACGCTCCTTGCTTTGCACGTCGGCATGTGGAGAACCGAAGAGAAGATTAGCTAATTAGTCAGTTAAAATGCGAAGAACTGACAATTTTGCTCTGAATCCAATATAAACTTCAATATGCTGATTTTATGAGCTAGGGTTCAGAGTTTACACGGCCTAGAGGGTGGTGTCAGCTTGATTGGCATAAGAGGAGACAATCTAGTCGGATAAAGACCTTTGAGGGAGATGGAATAGATTAATACATCTTCATCGCTTGATTGCTAGTAATGGATACATGACACCCTTTTATAGGGCATGGCTTTGACTGGACAGCTGATACATGGAATAATAATCTCTGCTCAACAGCTGATGAAATTTCTTTTAACTTCGTCAATTTGAAGCGACGAAAGAATGTTGAAGCTAGTTTACACATGCATTCAACCTTTTCCCGTGAAGGCATACTGAGCATTGCACTCAGGAACCTCTTTCAGATTTTTTTAGTGTATTATTTACCCTTTTATGTGCTTTCCGTGCCTTAATGTTTGTCAGAGTGTTGATGGCATGGGCACAAGCACATTCTTTATTTGTTTTGTTTTCAAGGGTTAATTTGATCCATGCCACTGCAAATGTGGCAAATCAAAAAATATGCCACTACTATTGACGTTATCTATTGGTGCCACTATAAATTC]
[+] EMBL AK073722             [AAAACACCCACACGCACGACTTCTTCGTCGGCGTCGCCGCGCCGCCGCGCCGCCGCCGCCGCCTCCGGCCGGCCGGCCGCACCTCCACCACCGCACAGCACCTCTCAGCTCTCACCCGCGGGGAGAAGGGAGGAACACGGAGAAGGCTCAGACTCGCCAATTTCATGGAGATTGCATCTCGGCTGTGTTGATGCGTCGCCCATGCACCCACTCACCCTCTCCTCCACCGCCCTCCTCCGCCTCATCAAGTCGCTCTCGCCGGCGGTGCGTAGGGCCCACCTGTCGGCGTCCTCTATCCACTGCCTCCTCCTCAAGGCCGGCCTCCTCCACGTCGGCGCGCACCTCCCGACGGCGCTCCTCTCCGCGTATGCCGCCCTCGGCAGCCCGGATCACGCGCGCAGGCTGTTCGACGAAATGCCCGAGCAAGGCCTTGTCCCGCGAACCGCCATGGCCCGGGCGCACGTCGCGTCTGGGCAGGCGGCTCAAGCGATCGCCGTATTCGGGGACATGGTGGCGGATGGTGTCTTCCCGGACAATGTCGCCCTGGCAGTCGCGCTTGGGGCATGCCATGGCGCTGGCTCTTGGACGGCTAGGAGGAATCCAGGCAAGAAGATCCATGCTCTCATCGTGACCAGCGGCATTGAGCCAGATGTGTTTGTCTCCACCGAGCTGATAAGGGTCTACGGTGAGTGTGGCAAGCTGGCGGTTTCTAGGAGGGTGTTCGATGACATGCCGTCGAGGAGTACCATTACATGGAACGCCATGTTGCATCAGTATGCCAGGCACGGGAAAGTTGACACGGCTTATGAGCTGTTCCTCGCAATGCCGAGGAGAGATGTTGTGTCCTGGAACACAGTGATGGCCGGGTACTGTGTTGCTGGCCGGTGCAGGGAGGCACTTGGCTTGTTCCGTCAGATGGTGTCGCCGTCATCGTGTGCGGTGCATCCTAATGTGCCTACGATGAGCACTATCCTCGGTGCTTGTGCCGGCGCGGGTTGTTTGGAGACCGGGATTTGGGTCCATGCATATATTGAGAGGAACAGGATGAATGATGATGGCTATCTGGATCGGTGCCTGATAGACATGTACTGCAAATGCGGAAGCATCGATAATGCCCTACAGGTGTTTGAGAAGGCACCTAGGAAGAGGGACCTGTTCTCATGGACAACCGTGATCTGTGGGCTGGCAATGCACGGCCGCGCCACTGATGCTTTGAGAATGTTTGACATGATGCAGGATAATGGCATATGCCCGGATGATGTCACGCTTGTTGGGGTCCTAAATGCTTGTGCACATGGAGGTTTGGTAGACGAAGGTCTTGGCTACTTCTACTCCATGGAGGCAAAATTTAGAATCACACCCAAGATTGAACACTATGGTTGCATGATTGATCTTCTTGGCCGCGTTGGGCGACTGCAGGAAGCATATAGCATGATAAGAACAATGCCAATGGATCCCAACACGGTTATTTGGGGTGCATTCTTGAGCGCGTGCAAAGTTCATGGCAATATGGAACTCGGCAAGATTGCGGCAGAAGAGCTCACCAGGTTGGATCCAGATGACCCTTGGGGGAGAGTGTTGCTGTCCAGCATGTACGCGAAAGCACAGGATTGGATTGGTCTTGCCCGGGAGAGGAGGGAGATGAACAGCATGCAGGTGAAGAAGACTCCTGGGTGCAGCTCGATCGAGCTCAAAGGCGAGGTGCATGAGTTTGTTGCTGGTGGCAGTCAGCATCCTCAGTATGCTGAGATTTGCAGTGTACTGCAAGATGTTGAAGCTCAAACAAATGTAGGTTGAGACACACAGCCTTCTGTTGAGCTTCTTGTGCTGCCAGGATTTCAGCACAGGTGCAATTTCCTCTGAGCCTTCACGAGAACGCTCCTTGCTTTGCACGTCGGCATGTGGAGAACCGAAGAGAAGATTAGCTAATTAGTCAGTTAAAATGCGAAGAACTGACAATTTTGCTCTGAATCCAATATAAACTTCAATATGCTGATTTTATGAGCTAGGGTTCAGAGTTTACACGGCCTAGAGGGTGGTGTCAGCTTGATTGGCATAAGAGGAGACAATCTAGTCGGATAAAGACCTTTGAGGGAGATGGAATAGATTAATACATCTTCATCGCTTGATTGCTAGTAATGGATACATGACACCCTTTTATAGGGCATGGCTTTGACTGGACAGCTGATACATGGAATAATAATCTCTGCTCAACAGCTGATGAAATTTCTTTTAACTTCGTCAATTTGAAGCGACGAAAGAATGTTGAAGCTAGTTTACACATGCATTCAACCTTTTCCCGTGAAGGCATACTGAGCATTGCACTCAGGAACCTCTTTCAGATTTTTTTAGTGTATTATTTACCCTTTTATGTGCTTTCCGTGCCTTAATGTTTGTCAGAGTGTTGATGGCATGGGCACAAGCACATTCTTTATTTGTTTTGTTTTCAAGGGTTAATTTGATCCATGCCACTGCAAAT                                                             ]




>consensus_2708#0
AAAACACCCACACGCACGACTTCTTCGTCGGCGTCGCCGCGCCGCCGCGCCGCCGCCGCC
GCCTCCGGCCGGCCGGCCGCACCTCCACCACCGCACAGCACCTCTCAGCTCTCACCCGCG
GGGAGAAGGGAGGAACACGGAGAAGGCTCAGACTCGCCAATTTCATGGAGATTGCATCTC
GGCTGTGTTGATGCGTCGCCCATGCACCCACTCACCCTCTCCTCCACCGCCCTCCTCCGC
CTCATCAAGTCGCTCTCGCCGGCGGTGCGTAGGGCCCACCTGTCGGCGTCCTCTATCCAC
TGCCTCCTCCTCAAGGCCGGCCTCCTCCACGTCGGCGCGCACCTCCCGACGGCGCTCCTC
TCCGCGTATGCCGCCCTCGGCAGCCCGGATCACGCGCGCAGGCTGTTCGACGAAATGCCC
GAGCAAGGCCTTGTCCCGCGAACCGCCATGGCCCGGGCGCACGTCGCGTCTGGGCAGGCG
GCTCAAGCGATCGCCGTATTCGGGGACATGGTGGCGGATGGTGTCTTCCCGGACAATGTC
GCCCTGGCAGTCGCGCTTGGGGCATGCCATGGCGCTGGCTCTTGGACGGCTAGGAGGAAT
CCAGGCAAGAAGATCCATGCTCTCATCGTGACCAGCGGCATTGAGCCAGATGTGTTTGTC
TCCACCGAGCTGATAAGGGTCTACGGTGAGTGTGGCAAGCTGGCGGTTTCTAGGAGGGTG
TTCGATGACATGCCGTCGAGGAGTACCATTACATGGAACGCCATGTTGCATCAGTATGCC
AGGCACGGGAAAGTTGACACGGCTTATGAGCTGTTCCTCGCAATGCCGAGGAGAGATGTT
GTGTCCTGGAACACAGTGATGGCCGGGTACTGTGTTGCTGGCCGGTGCAGGGAGGCACTT
GGCTTGTTCCGTCAGATGGTGTCGCCGTCATCGTGTGCGGTGCATCCTAATGTGCCTACG
ATGAGCACTATCCTCGGTGCTTGTGCCGGCGCGGGTTGTTTGGAGACCGGGATTTGGGTC
CATGCATATATTGAGAGGAACAGGATGAATGATGATGGCTATCTGGATCGGTGCCTGATA
GACATGTACTGCAAATGCGGAAGCATCGATAATGCCCTACAGGTGTTTGAGAAGGCACCT
AGGAAGAGGGACCTGTTCTCATGGACAACCGTGATCTGTGGGCTGGCAATGCACGGCCGC
GCCACTGATGCTTTGAGAATGTTTGACATGATGCAGGATAATGGCATATGCCCGGATGAT
GTCACGCTTGTTGGGGTCCTAAATGCTTGTGCACATGGAGGTTTGGTAGACGAAGGTCTT
GGCTACTTCTACTCCATGGAGGCAAAATTTAGAATCACACCCAAGATTGAACACTATGGT
TGCATGATTGATCTTCTTGGCCGCGTTGGGCGACTGCAGGAAGCATATAGCATGATAAGA
ACAATGCCAATGGATCCCAACACGGTTATTTGGGGTGCATTCTTGAGCGCGTGCAAAGTT
CATGGCAATATGGAACTCGGCAAGATTGCGGCAGAAGAGCTCACCAGGTTGGATCCAGAT
GACCCTTGGGGGAGAGTGATGCTGTCCAGCATGTACGCGAAAGCACAGGATTGGATTGGT
CTTGCCCGGGAGAGGAGGGAGATGAACAGCATGCAGGTGAAGAAGACTCCTGGGTGCAGC
TCGATCGAGCTCAAAGGCGAGGTGCATGAGTTTGTTGCTGGTGGCAGTCAGCATCCTCAG
TATGCTGAGATTTGCAGTGTACTGCAAGATGTTGAAGCTCAAACAAATGTAGGTTGAGAC
ACACAGCCTTCTGTTGAGCTTCTTGTGCTGCCAGGATTTCAGCACAGGTGCAATTTCCTC
TGAGCCTTCACGAGAACGCTCCTTGCTTTGCACGTCGGCATGTGGAGAACCGAAGAGAAG
ATTAGCTAATTAGTCAGTTAAAATGCGAAGAACTGACAATTTTGCTCTGAATCCAATATA
AACTTCAATATGCTGATTTTATGAGCTAGGGTTCAGAGTTTACACGGCCTAGAGGGTGGT
GTCAGCTTGATTGGCATAAGAGGAGACAATCTAGTCGGATAAAGACCTTTGAGGGAGATG
GAATAGATTAATACATCTTCATCGCTTGATTGCTAGTAATGGATACATGACACCCTTTTA
TAGGGCATGGCTTTGACTGGACAGCTGATACATGGAATAATAATCTCTGCTCAACAGCTG
ATGAAATTTCTTTTAACTTCGTCAATTTGAAGCGACGAAAGAATGTTGAAGCTAGTTTAC
ACATGCATTCAACCTTTTCCCGTGAAGGCATACTGAGCATTGCACTCAGGAACCTCTTTC
AGATTTTTTTAGTGTATTATTTACCCTTTTATGTGCTTTCCGTGCCTTAATGTTTGTCAG
AGTGTTGATGGCATGGGCACAAGCACATTCTTTATTTGTTTTGTTTTCAAGGGTTAATTT
GATCCATGCCACTGCAAATGTGGCAAATCAAAAAATATGCCACTACTATTGACGTTATCT
ATTGGTGCCACTATAAATTC
clustalw multiple alignements is not computed in this case