Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2738 cluster # 2738       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2738#0 length = 2444 sequences # 1  
consensus_2738#1 length = 2122 sequences # 1  

consensusID : consensus_2738#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2444
fasta sequence
                              [CCATGCTTAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATCTCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCACTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCAACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTCTCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTTCGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGATGCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTAGTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCATTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGTTCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTTAGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTTGACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGAACTAGATTCTTGTGCCGAAGGCGCCCCCATGCTGACAACCTCTGCAATGAATTCCTTCACCCCTTGCCTAGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATACAGAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCCAAACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAACCTTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCACAAGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTCAGATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGCAGGGGCAGCTCCATTCAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAGGCCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAGGCCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAGCGTCACATTCAGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAGTGTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTATGAATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGGGCTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCTGATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGGTGGCCGAGAGGTTCTTGCTGGGCGCGACCAGGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACACGAAGGTGGCAGAGAAGGATGCAGTAGCGCTGCTGTTCGGCGTCAAGTGGAAACTGACAGGAGTAGGATAGAAGGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACTCGGCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGCGAACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTACAAGGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCAGAGCTCTCAAATTTTGTCACTTCCGTCTTCAGTGGTTGGGTGAAGTTTCTGAACAAGCAGCTTTGTGGCTTGGTCTTCATCCAAGTCAATTCAATACTAATGCATCATCATCAGAAACAGTACCCTGCTAGAAAGGACAGAGGGAGAAACAAGGATGCCGTAGTAGTGAGATAGTCAGACTACTGGGTACCAAATTTCTAGGGGATAGGTTTACTAGTGGAGTAGTGGTCTAATTGCTTTGCCGGCCGGCCACGATCCGTCAACATTTGACTCGTTCGACAACCTTGCGTGGTGAGAAGGAGGTGTTTGTTTACTAGTCTGTGCATCTGTGGTCACTCAAGTTCCTTGGTTTCAACTCAAAACACATTGTATATTATGCTTGTCATTCATAGAGATATACACTGTACACTAAGAATCAGACTCCGGATGTTTCCCATGCGAAAGCAAAGTCTTGATTTGTACTCCTATAAAACTTC]

[+] EMBL AK100114             [CCATGCTTAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATCTCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCACTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCAACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTCTCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTTCGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGATGCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTAGTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCATTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGTTCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTTAGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTTGACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGAACTAGATTCTTGTGCCGAAGGCGCCCCCATGCTGACAACCTCTGCAATGAATTCCTTCACCCCTTGCCTAGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATACAGAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCCAAACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAACCTTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCACAAGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTCAGATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGCAGGGGCAGCTCCATTCAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAGGCCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAGGCCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAGCGTCACATTCAGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAGTGTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTATGAATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGGGCTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCTGATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGGTGGCCGAGAGGTTCTTGCTGGGCGCGACCAGGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACACGAAGGTGGCAGAGAAGGATGCAGTAGCGCTGCTGTTCGGCGTCAAGTGGAAACTGACAGGAGTAGGATAGAAGGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACTCGGCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGCGAACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTACAAGGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCAGAGCTCTCAAATTTTGTCACTTCCGTCTTCAGTGGTTGGGTGAAGTTTCTGAACAAGCAGCTTTGTGGCTTGGTCTTCATCCAAGTCAATTCAATACTAATGCATCATCATCAGAAACAGTACCCTGCTAGAAAGGACAGAGGGAGAAACAAGGATGCCGTAGTAGTGAGATAGTCAGACTACTGGGTACCAAATTTCTAGGGGATAGGTTTACTAGTGGAGTAGTGGTCTAATTGCTTTGCCGGCCGGCCACGATCCGTCAACATTTGACTCGTTCGACAACCTTGCGTGGTGAGAAGGAGGTGTTTGTTTACTAGTCTGTGCATCTGTGGTCACTCAAGTTCCTTGGTTTCAACTCAAAACACATTGTATATTATGCTTGTCATTCATAGAGATATACACTGTACACTAAGAATCAGACTCCGGATGTTTCCCATGCGAAAGCAAAGTCTTGATTTGTACTCCTATAAAACTTC]


>consensus_2738#0 CCATGCTTAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATCTCTGGTGCCAGC ACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCACTAGGCAACGGC TGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCAACATACTCACTG CTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTCTCAAGCACCCAA TCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTTCGGCCACAGGCC ACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGATGCCTTCCCTGTG CGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTAGTCCTTGGGTTG GTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCATTCATCTCATTG TTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGTTCCCATTCCTCA TGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTTAGGTTCCAGTCT AGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTTGACATGTATTCA TAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGAACTAGATTCTTG TGCCGAAGGCGCCCCCATGCTGACAACCTCTGCAATGAATTCCTTCACCCCTTGCCTAGA GTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATACAGAGAGAACTCC TCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCCAAACCCTTGTGT GGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAACCTTCCAATCTTC TCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCACAAGAAGCAATCC AATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTCAGATCGATGGTG CCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGCAGGGGCAGCTCC ATTCAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAGGCCTGTCGCCGA CGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAGGCCGGTTGGGAG CAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAGCGTCACATTCAGAACCATGGC CTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAGTGTCAAGTTCAT GAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTATGAATTGCAGGCT GTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGGGCTGAGGACGGT GTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCTGATGTTCATGAG ACCCAAGTGCTGCGCCCCTGTGGTGGCCGAGAGGTTCTTGCTGGGCGCGACCAGGAACGC GAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACACGAAGGTGGCAGA GAAGGATGCAGTAGCGCTGCTGTTCGGCGTCAAGTGGAAACTGACAGGAGTAGGATAGAA GGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACTCGGCGTCACGGC GGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGCGAACTGGTTTTC GCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTACAAGGAAGCTGGA GATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCAGAGCTCTCAAAT TTTGTCACTTCCGTCTTCAGTGGTTGGGTGAAGTTTCTGAACAAGCAGCTTTGTGGCTTG GTCTTCATCCAAGTCAATTCAATACTAATGCATCATCATCAGAAACAGTACCCTGCTAGA AAGGACAGAGGGAGAAACAAGGATGCCGTAGTAGTGAGATAGTCAGACTACTGGGTACCA AATTTCTAGGGGATAGGTTTACTAGTGGAGTAGTGGTCTAATTGCTTTGCCGGCCGGCCA CGATCCGTCAACATTTGACTCGTTCGACAACCTTGCGTGGTGAGAAGGAGGTGTTTGTTT ACTAGTCTGTGCATCTGTGGTCACTCAAGTTCCTTGGTTTCAACTCAAAACACATTGTAT ATTATGCTTGTCATTCATAGAGATATACACTGTACACTAAGAATCAGACTCCGGATGTTT CCCATGCGAAAGCAAAGTCTTGATTTGTACTCCTATAAAACTTC



consensusID : consensus_2738#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2122
fasta sequence
                              [GTGGTCAGCTTGTTATTATATTAAAGGCATTAAGACTTATAAGTACAAACTTGTTAGATAAACATACAGAAAACTAACAAGCAATGGTAAACCACAAGTCCTCATCATCTTCCTCCTGAAAGATCAGACCCAGGGCCAACTGTTGTTGCCAATGAGGATGCTTCCAGCATGGCGTATGACTCAACCCTTTCATTCTGCAGAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATCTCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCACTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCAACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTCTCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTTCGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGATGCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTAGTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCATTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGTTCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTTAGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTTGACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGAACTAGATTCTTGTGCCGAAGGCGCCCCATGCTGACAACCTCTGCAATGAATTCCTTCACCCCTTGCCTGGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATACAGAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCCAAACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAACCTTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCACAAGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTCAGATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGCAGGGGCAGCTCCATACAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAGGCCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAGGCCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAACGTCACATTCAGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAGTGTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTATGAATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGGGCTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCTGATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGGCGAGAGGTTCTTGCTGGGCGCGACCAGGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACACGAAGGTGGCAGAGAAGGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACTCGGCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGCGAACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTACAAGGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCAGAGCTCTCAAATTTTGTCACTTCC]

[-] EMBL AK107444             [GTGGTCAGCTTGTTATTATATTAAAGGCATTAAGACTTATAAGTACAAACTTGTTAGATAAACATACAGAAAACTAACAAGCAATGGTAAACCACAAGTCCTCATCATCTTCCTCCTGAAAGATCAGACCCAGGGCCAACTGTTGTTGCCAATGAGGATGCTTCCAGCATGGCGTATGACTCAACCCTTTCATTCTGCAGAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATCTCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCACTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCAACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTCTCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTTCGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGATGCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTAGTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCATTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGTTCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTTAGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTTGACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGAACTAGATTCTTGTGCCGAAGGCGCCCCATGCTGACAACCTCTGCAATGAATTCCTTCACCCCTTGCCTGGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATACAGAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCCAAACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAACCTTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCACAAGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTCAGATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGCAGGGGCAGCTCCATACAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAGGCCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAGGCCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAACGTCACATTCAGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAGTGTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTATGAATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGGGCTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCTGATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGGCGAGAGGTTCTTGCTGGGCGCGACCAGGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACACGAAGGTGGCAGAGAAGGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACTCGGCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGCGAACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTACAAGGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCAGAGCTCTCAAATTTTGTCACTTCC]


>consensus_2738#1 GTGGTCAGCTTGTTATTATATTAAAGGCATTAAGACTTATAAGTACAAACTTGTTAGATA AACATACAGAAAACTAACAAGCAATGGTAAACCACAAGTCCTCATCATCTTCCTCCTGAA AGATCAGACCCAGGGCCAACTGTTGTTGCCAATGAGGATGCTTCCAGCATGGCGTATGAC TCAACCCTTTCATTCTGCAGAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATC TCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCA CTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCA ACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTC TCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTT CGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGAT GCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTA GTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCA TTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGT TCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTT AGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTT GACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGA ACTAGATTCTTGTGCCGAAGGCGCCCCATGCTGACAACCTCTGCAATGAATTCCTTCACC CCTTGCCTGGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATACA GAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCCA AACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAACC TTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCACA AGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTCA GATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGCA GGGGCAGCTCCATACAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAGG CCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAGG CCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAACGTCACATTC AGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAGT GTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTATG AATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGGG CTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCTG ATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGGCGAGAGGTTCTTGCTGGGCGCGACCA GGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACACGAAGG TGGCAGAGAAGGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACTCG GCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGCGA ACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTACAA GGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCAGA GCTCTCAAATTTTGTCACTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2738#0      ------------------------------------------------------------
consensus_2738#1      GTGGTCAGCTTGTTATTATATTAAAGGCATTAAGACTTATAAGTACAAACTTGTTAGATA 60
                                                                                  

consensus_2738#0      ------------------------------------------------------------
consensus_2738#1      AACATACAGAAAACTAACAAGCAATGGTAAACCACAAGTCCTCATCATCTTCCTCCTGAA 120
                                                                                  

consensus_2738#0      ------------------------------------------------------------
consensus_2738#1      AGATCAGACCCAGGGCCAACTGTTGTTGCCAATGAGGATGCTTCCAGCATGGCGTATGAC 180
                                                                                  

consensus_2738#0      ------------CCATGCTTAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATC 48
consensus_2738#1      TCAACCCTTTCATTCTGCAGAAACATTAGTGTATCATAGTCCAAGTCTGTCGGCAACATC 240
                                     ***  ****************************************

consensus_2738#0      TCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCA 108
consensus_2738#1      TCTGGTGCCAGCACAGTGCCATTAGGGTACTGCAGGACTTGCCGCATGCTCGGCCGTGCA 300
                      ************************************************************

consensus_2738#0      CTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCA 168
consensus_2738#1      CTAGGCAACGGCTGCAAGCAGAGGAGCCCCAGCTTCAGCACCAAGTTCGCCTCCTCGGCA 360
                      ************************************************************

consensus_2738#0      ACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTC 228
consensus_2738#1      ACATACTCACTGCTGAGCCTGGGATCCACCACGTCAAGAATTTGTCCTCTGTTCCAGTTC 420
                      ************************************************************

consensus_2738#0      TCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTT 288
consensus_2738#1      TCAAGCACCCAATCCAGTAGCACGACCTGGTTGTCCTGGAGGTCATGTTCCAGAGGCCTT 480
                      ************************************************************

consensus_2738#0      CGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGAT 348
consensus_2738#1      CGGCCACAGGCCACCTCCAAAAGAAACATCCCAAAGGCAAAAACATCAGTAGCTGGTGAT 540
                      ************************************************************

consensus_2738#0      GCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTA 408
consensus_2738#1      GCCTTCCCTGTGCGGAGAAGCTAAGGGGATAGGTAACCCATTGTGCCTACAATATGTGTA 600
                      ************************************************************

consensus_2738#0      GTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCA 468
consensus_2738#1      GTCCTTGGGTTGGTGCCATGGTCGTACAACCTTGCAAGGCCGAAGTCGCCCAAGCATCCA 660
                      ************************************************************

consensus_2738#0      TTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGT 528
consensus_2738#1      TTCATCTCATTGTTGAGAAGCACGTTATTTGCCTTGATGTCTCGATGTACAACGACTTGT 720
                      ************************************************************

consensus_2738#0      TCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTT 588
consensus_2738#1      TCCCATTCCTCATGGAGGTACAATAAGCCAGATGCAATCCCTTTGATGATGTGAAACCTT 780
                      ************************************************************

consensus_2738#0      AGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTT 648
consensus_2738#1      AGGTTCCAGTCTAGAACAGGATTGTTCTTGTCATGTAAGTGCTTGTCGAGGCTACCATTT 840
                      ************************************************************

consensus_2738#0      GACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGA 708
consensus_2738#1      GACATGTATTCATAGACCAAGAGAAGTTCACCCTTGCGTCGGCAATAGCCAAGTAGCTGA 900
                      ************************************************************

consensus_2738#0      ACTAGATTCTTGTGCCGAAGGCGCCCCCATGCTGACAACCTCTGCAATGAATTCCTTCAC 768
consensus_2738#1      ACTAGATTCTTGTGCCGAAGGCGCCCC-ATGCTGACAACCTCTGCAATGAATTCCTTCAC 959
                      *************************** ********************************

consensus_2738#0      CCCTTGCCTAGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATAC 828
consensus_2738#1      CCCTTGCCTGGAGTCATGTGACACTCTCTTCACCGCAATCTCTGAGTTAGAGTTGGATAC 1019
                      ********* **************************************************

consensus_2738#0      AGAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCC 888
consensus_2738#1      AGAGAGAACTCCTCTGTACACTCTCCCGAATCCTCCAATTCCAAGCAAACGCTTGCTCCC 1079
                      ************************************************************

consensus_2738#0      AAACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAAC 948
consensus_2738#1      AAACCCTTGTGTGGCATCGAACAGATCTTTGTAAGAAAACCTTTGTGGTCCAAACTCAAC 1139
                      ************************************************************

consensus_2738#0      CTTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCAC 1008
consensus_2738#1      CTTCCAATCTTCTCTCAGCTCGGCATGCCTAAACCATCTCTTGACAATCATGAACCCCAC 1199
                      ************************************************************

consensus_2738#0      AAGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTC 1068
consensus_2738#1      AAGAAGCAATCCAATGACAAGAGCAGCCGTGGCTATCGGCAGCACAACCACCAAAATTTC 1259
                      ************************************************************

consensus_2738#0      AGATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGC 1128
consensus_2738#1      AGATCGATGGTGCCTCTGCTCTAGTTTTGGCAACACAGGCAGCTTAGATGGGTTGAGAGC 1319
                      ************************************************************

consensus_2738#0      AGGGGCAGCTCCATTCAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAG 1188
consensus_2738#1      AGGGGCAGCTCCATACAAGCTGAAACTCCAGCCAAGAACATAATGGTAGGCAATGGAGAG 1379
                      ************** *********************************************

consensus_2738#0      GCCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAG 1248
consensus_2738#1      GCCTGTCGCCGACGAGAATCCGATGTAGGCAATATCCTCCACTACCCTCGATAGGTCGAG 1439
                      ************************************************************

consensus_2738#0      GCCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAGCGTCACATT 1308
consensus_2738#1      GCCGGTTGGGAGCAGAGGTTTCTTGGGCTTGGACACACCCAATGGAGCTAACGTCACATT 1499
                      ************************************************** *********

consensus_2738#0      CAGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAG 1368
consensus_2738#1      CAGAACCATGGCCTGCCCATTGTAGTCCACCCACACCTGCATGGCCTTGCGGCTTATCAG 1559
                      ************************************************************

consensus_2738#0      TGTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTAT 1428
consensus_2738#1      TGTCAAGTTCATGAACGCGCCGGTGCTGTCATCATAGTAGCCGGCGGTGTGGGACTGTAT 1619
                      ************************************************************

consensus_2738#0      GAATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGG 1488
consensus_2738#1      GAATTGCAGGCTGTTCACGTCAATGCCGACATGGTTGCTGTCTATGTCGTGGAGCTCCGG 1679
                      ************************************************************

consensus_2738#0      GCTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCT 1548
consensus_2738#1      GCTGAGGACGGTGTCGAGCTCGACGGCAAAGACGTGGTTGCTCGCCTTGCCATTGTCGCT 1739
                      ************************************************************

consensus_2738#0      GATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGGTGGCCGAGAGGTTCTTGCTGGGCGC 1608
consensus_2738#1      GATGTTCATGAGACCCAAGTGCTGCGCCCCTGTGG----CGAGAGGTTCTTGCTGGGCGC 1795
                      ***********************************    *********************

consensus_2738#0      GACCAGGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACAC 1668
consensus_2738#1      GACCAGGAACGCGAGGCCGTGGTCGCTTAGCTCCGCATGCTCGGAGACGATGGCGAACAC 1855
                      ************************************************************

consensus_2738#0      GAAGGTGGCAGAGAAGGATGCAGTAGCGCTGCTGTTCGGCGTCAAGTGGAAACTGACAGG 1728
consensus_2738#1      GAAGGTGGCAGAGAAGG------------------------------------------- 1872
                      *****************                                           

consensus_2738#0      AGTAGGATAGAAGGCGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACT 1788
consensus_2738#1      --------------CGTGGCCTTTGATGTGCTTGTCGTTGGTGAGCTTGAGCAGGCCACT 1918
                                    **********************************************

consensus_2738#0      CGGCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGC 1848
consensus_2738#1      CGGCGTCACGGCGGCGGCGCCATCGAGGCTGAGGTTTGCTCCGGCGAAGCCTTCGAAGGC 1978
                      ************************************************************

consensus_2738#0      GAACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTAC 1908
consensus_2738#1      GAACTGGTTTTCGCTAGCAGATGGCGCCACCAGCTTGATGCAGTGGAAGACAGTGAGTAC 2038
                      ************************************************************

consensus_2738#0      AAGGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCA 1968
consensus_2738#1      AAGGAAGCTGGAGATGGGCCTGATGATCACCATGGCTACCGTGACGCATGAGCCAGGGCA 2098
                      ************************************************************

consensus_2738#0      GAGCTCTCAAATTTTGTCACTTCCGTCTTCAGTGGTTGGGTGAAGTTTCTGAACAAGCAG 2028
consensus_2738#1      GAGCTCTCAAATTTTGTCACTTCC------------------------------------ 2122
                      ************************                                    

consensus_2738#0      CTTTGTGGCTTGGTCTTCATCCAAGTCAATTCAATACTAATGCATCATCATCAGAAACAG 2088
consensus_2738#1      ------------------------------------------------------------
                                                                                  

consensus_2738#0      TACCCTGCTAGAAAGGACAGAGGGAGAAACAAGGATGCCGTAGTAGTGAGATAGTCAGAC 2148
consensus_2738#1      ------------------------------------------------------------
                                                                                  

consensus_2738#0      TACTGGGTACCAAATTTCTAGGGGATAGGTTTACTAGTGGAGTAGTGGTCTAATTGCTTT 2208
consensus_2738#1      ------------------------------------------------------------
                                                                                  

consensus_2738#0      GCCGGCCGGCCACGATCCGTCAACATTTGACTCGTTCGACAACCTTGCGTGGTGAGAAGG 2268
consensus_2738#1      ------------------------------------------------------------
                                                                                  

consensus_2738#0      AGGTGTTTGTTTACTAGTCTGTGCATCTGTGGTCACTCAAGTTCCTTGGTTTCAACTCAA 2328
consensus_2738#1      ------------------------------------------------------------
                                                                                  

consensus_2738#0      AACACATTGTATATTATGCTTGTCATTCATAGAGATATACACTGTACACTAAGAATCAGA 2388
consensus_2738#1      ------------------------------------------------------------
                                                                                  

consensus_2738#0      CTCCGGATGTTTCCCATGCGAAAGCAAAGTCTTGATTTGTACTCCTATAAAACTTC 2444
consensus_2738#1      --------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)