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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2739#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2645 fasta sequence
[TCCTTCTCCTCGTCGGCATCCTGGTCATCGTCCTCCTTTTGCTTTGGAGACTCCTCCCCCTTTCCTTGTTGTCTCTCTTGCGGGATCTCTACGTCAGAGCTCTCGCACCTCTCTCTTAAGCTTTTCTTCTCTGGCCGATCCTTGAAGCAAGACGCCGGTCCATGGTCGGATAAGGATTTCAGACTGCTGCCCTGGTGCCGCGATCCTACAAGCTTGTGAAAGGAATTCAATCCGTGCCATCCAAAGAAGCAGAGGAAGAAAGAAGCAATCAAGAAGAGCGCGCGCACTTGATCCATCGTCCTATCGGCAGGCAAGGCTGATCGCCGATAGGGATGGAGCAGCTCCGGCAACTCGGCGAGGCGGTGGGTAGCATCAACGCGCTCATGGCGTTCGAGGACGACCTCCACATCAACCCGCGGCAGTGCCGCCTCCTCGCCGACGCCTGCGCGCGCGCGCTCGCCGCCGTCACGGGGCAGGTTCGCGCCCAGCTCCGCTTCGACGAGCGCGGCGCCAAGTGGCGCGCCATCGAGGCGCCGCTCCGCGAGCTCCACCGCGCCTTCCGCGACGCCGAGGCGTACGTCAGGCAGTGCCTGGACCCCCGCGGCAGCTGGTGGGCGCGCGCCGCGGCCATGGCGCACGGCACCGAGTGCGTGGAGCAGCACCTCCACAATGTCCTGTGGTGCGTCGCCGTCGCGCTCGAGGCCATCGACGCCGCCGGCGAGATCGCCGGCTCCGACCCGGACGAGCTCGCCAGGGGGCGGCTGGTGCTCGCCAGGAAGTACGACAGGGACATGCTCGATCCCAAGCTGTTCGAGCACGCGTTCGGCAAGCTATATCTGGTCTCCCAAGAGCTCGTTGCAAGGATGGACATGGCGTGGAAGGAGGACAGATGGGTGATATCGCAAATGTTCGACGAAATGAAAGGCCCTGCGGCGTCGAAACCTCTGAGCAAAAACGAGCACCGCCTCGCCGAGCTCCCTCGCCGCGGCGATGGGGAAGCTGCACCCGGCATCTGTCCTTCTTGGCAGCGACTACAGCGTCCGGAGGCGGGCTCGGCGGCCGGCTCAAGGAGGTGCATTGGATGGGGGAGAGCTNTGCGATGAAGCATTTCATCGGGGACACCGATGCCGCCGGCGCCGAGGTCGCGCTCCTGTGTTCGGTGGCGCACCCGAACGTCGCGCACGCCGCGTACTGCTTCCACGACGAGGAGAAGAAAGAGTACTTCTTGGTCATGGACCAGCTCATGGCCAAGGACCTCGGGAGCTACGTCAAGGAGGTGAGCTGCCCGCGGCGGCGGATCCCGTTCCCGCTCGTCGTCGCCGTCGACATTATGCTGCAGATCGCGCGCGGGATGGAGTATCTGCACGCGAAGAGGATAAACCACGGCGAGCTGAACCCCTCCAACGTGCTCGTCAAGCCGCGCCAACCCGATGGCGGCTACGTGCATGTCAAGGTCGCCGGATATGGGCAGCCAGCTGGCATCACAGCCGGCGGCGCAAAAGCTTCCGCCAATGGCAACGCCAACGGCAACGACAACTCCTGCATCTGGTACGCGCCGGAGGTGCTCAGGTCCGACGGCGTCGCGGACGCCGCGGCGGCGGGGAGGTGCACCGAGAAGGCCGACGTGTACAGCTTCGCCATGATCTGCTTCGAGCTGCTGACCGGCAAGGTGCCGTTCGAGGACAACCACCTGCAGGGCGACAAGACGAGCAAGAACATCTGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGGCGCCCAAGTACCTCACCGCGCTGACGAAGCGGTGCTGGCACGCCGACCCGGCGCAGCGGCTGGCGTTCGCCTCCATCTGCCGCGTCCTCCGGTACGTCAAGCGGTTCCTGATCCTGAACCCGGAGCAGCAGCAGCAGCAGCAGCAGGGCCAGACCGACGACGCGCCCAAGCCGGCCGTCGACTACCTCGACATCGAGGCGCAGCTGCTGAAGAAGCTCCCGGCGTGGCAGCGTGGCGGCGAGGCGCCGCGCGTCGCCGACGTGCCGTTCCAGATGTTCGCGTACAGGGTCATGGAGAGGGAGAAGGCCGCCGGCGCCGTGCACGTCGCCAAGGACAGGGCCTCGGATTCGGGCAGCGACGGGAACTCGCTGTACGGCGACGAGAACGGGTTCGGTGCAATGTCGCCGGAGCACACCTTCTCCGCCGTGTCGAACGGCACCCTGCGGTCGCGGCCGGCCAGCAGCGACGGCAGGTTGCCGACGGCCAAGAAGGCGGACGGCAAGGCGCCCAGGCAAGCAGGGCCACAGCCGAAGGTGAAACCCGTGAACACGGCGGCGAGGACTCCGCACTCGGCAAGGCGGGCGCTCGGCGTGAAGCCCGACGATCACCTCCAGACCAACGGCGCTCCCACCGCCCGCCGGAGGACGCCCGAGATGGCCTCAGAATAGCAGCGCAAGCTGCTCTCGTGTTCGTGTTCGTGATCGAGTTTAATGGGTAGAACGCGTTCGATGGAGACGGTTCTTTCCTCTTTCCTTCCGTAGCACAGCGTCTTTTTGCCAGGGGAACCCGAACCTGCAGGGGCATATCAATGGAGGTTTTGCACGCTACTCATTTGCGTGGAACGAAATCCCACGTGTTAGGAATCCTTGTGGATTGAAAATGAACGGGTTT]
[+] EMBL AK100122 [TCCTTCTCCTCGTCGGCATCCTGGTCATCGTCCTCCTTTTGCTTTGGAGACTCCTCCCCCTTTCCTTGTTGTCTCTCTTGCGGGATCTCTACGTCAGAGCTCTCGCACCTCTCTCTTAAGCTTTTCTTCTCTGGCCGATCCTTGAAGCAAGACGCCGGTCCATGGTCGGATAAGGATTTCAGACTGCTGCCCTGGTGCCGCGATCCTACAAGCTTGTGAAAGGAATTCAATCCGTGCCATCCAAAGAAGCAGAGGAAGAAAGAAGCAATCAAGAAGAGCGCGCGCACTTGATCCATCGTCCTATCGGCAGGCAAGGCTGATCGCCGATAGGGATGGAGCAGCTCCGGCAACTCGGCGAGGCGGTGGGTAGCATCAACGCGCTCATGGCGTTCGAGGACGACCTCCACATCAACCCGCGGCAGTGCCGCCTCCTCGCCGACGCCTGCGCGCGCGCGCTCGCCGCCGTCACGGGGCAGGTTCGCGCCCAGCTCCGCTTCGACGAGCGCGGCGCCAAGTGGCGCGCCATCGAGGCGCCGCTCCGCGAGCTCCACCGCGCCTTCCGCGACGCCGAGGCGTACGTCAGGCAGTGCCTGGACCCCCGCGGCAGCTGGTGGGCGCGCGCCGCGGCCATGGCGCACGGCACCGAGTGCGTGGAGCAGCACCTCCACAATGTCCTGTGGTGCGTCGCCGTCGCGCTCGAGGCCATCGACGCCGCCGGCGAGATCGCCGGCTCCGACCCGGACGAGCTCGCCAGGGGGCGGCTGGTGCTCGCCAGGAAGTACGACAGGGACATGCTCGATCCCAAGCTGTTCGAGCACGCGTTCGGCAAGCTATATCTGGTCTCCCAAGAGCTCGTTGCAAGGATGGACATGGCGTGGAAGGAGGACAGATGGGTGATATCGCAAATGTTCGACGAAATGAAAGGCCCTGCGGCGTCGAAACCTCTGAGCAAAAACGAGCACCGCCTCGCCGAGCTCCCTCGCCGCGGCGATGGGGAAGCTGCACCCGGCATCTGTCCTTCTTGGCAGCGACTACAGCGTCCGGAGGCGGGCTCGGCGGCCGGCTCAAGGAGGTGCATTGGATGGGGGAGAGCTNTGCGATGAAGCATTTCATCGGGGACACCGATGCCGCCGGCGCCGAGGTCGCGCTCCTGTGTTCGGTGGCGCACCCGAACGTCGCGCACGCCGCGTACTGCTTCCACGACGAGGAGAAGAAAGAGTACTTCTTGGTCATGGACCAGCTCATGGCCAAGGACCTCGGGAGCTACGTCAAGGAGGTGAGCTGCCCGCGGCGGCGGATCCCGTTCCCGCTCGTCGTCGCCGTCGACATTATGCTGCAGATCGCGCGCGGGATGGAGTATCTGCACGCGAAGAGGATAAACCACGGCGAGCTGAACCCCTCCAACGTGCTCGTCAAGCCGCGCCAACCCGATGGCGGCTACGTGCATGTCAAGGTCGCCGGATATGGGCAGCCAGCTGGCATCACAGCCGGCGGCGCAAAAGCTTCCGCCAATGGCAACGCCAACGGCAACGACAACTCCTGCATCTGGTACGCGCCGGAGGTGCTCAGGTCCGACGGCGTCGCGGACGCCGCGGCGGCGGGGAGGTGCACCGAGAAGGCCGACGTGTACAGCTTCGCCATGATCTGCTTCGAGCTGCTGACCGGCAAGGTGCCGTTCGAGGACAACCACCTGCAGGGCGACAAGACGAGCAAGAACATCTGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGGCGCCCAAGTACCTCACCGCGCTGACGAAGCGGTGCTGGCACGCCGACCCGGCGCAGCGGCTGGCGTTCGCCTCCATCTGCCGCGTCCTCCGGTACGTCAAGCGGTTCCTGATCCTGAACCCGGAGCAGCAGCAGCAGCAGCAGCAGGGCCAGACCGACGACGCGCCCAAGCCGGCCGTCGACTACCTCGACATCGAGGCGCAGCTGCTGAAGAAGCTCCCGGCGTGGCAGCGTGGCGGCGAGGCGCCGCGCGTCGCCGACGTGCCGTTCCAGATGTTCGCGTACAGGGTCATGGAGAGGGAGAAGGCCGCCGGCGCCGTGCACGTCGCCAAGGACAGGGCCTCGGATTCGGGCAGCGACGGGAACTCGCTGTACGGCGACGAGAACGGGTTCGGTGCAATGTCGCCGGAGCACACCTTCTCCGCCGTGTCGAACGGCACCCTGCGGTCGCGGCCGGCCAGCAGCGACGGCAGGTTGCCGACGGCCAAGAAGGCGGACGGCAAGGCGCCCAGGCAAGCAGGGCCACAGCCGAAGGTGAAACCCGTGAACACGGCGGCGAGGACTCCGCACTCGGCAAGGCGGGCGCTCGGCGTGAAGCCCGACGATCACCTCCAGACCAACGGCGCTCCCACCGCCCGCCGGAGGACGCCCGAGATGGCCTCAGAATAGCAGCGCAAGCTGCTCTCGTGTTCGTGTTCGTGATCGAGTTTAATGGGTAGAACGCGTTCGATGGAGACGGTTCTTTCCTCTTTCCTTCCGTAGCACAGCGTCTTTTTGCCAGGGGAACCCGAACCTGCAGGGGCATATCAATGGAGGTTTTGCACGCTACTCATTTGCGTGGAACGAAATCCCACGTGTTAGGAATCCTTGTGGATTGAAAATGAACGGGTTT]
consensusID : consensus_2739#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2246 fasta sequence
[ATCCATATCCATAGATAGATAGAAGAAGAATCGAGGAGGAGAAGGAGGAGGATGGAGCAGCTCCGGCAGGTCGGCGAGGCCATCGGCGGCGTCAACGCCCTCATGGCCTTCCACGACGACCTCCGCTGCATCAACCCTCGCCAATGCGCCCTCCTCGCCCACGCCTACGCCCTCGCCTTCCGCGCCGTCGCCGGCGAGCTCCGCGCCCGCCTCCGCTTCCACGACCGCCTCACCAAATGGAAGCCCCTCGACGATCCCCTCCGCGAGCTCCACCGCGTCGTCCGCGACGGCGAGGCCTACATCCGCCACTGCCTCCTCCTCGACCCGGCCCACTGGTGGGCGCGCGCCGCCGCCGCCACGCACGGCACGGAATGCGTCGAGCACCACCTCCACAACCTCCTTTGGTGCGTCTCCGTCGTCGTCGAGGCGGTCGAGAACGTCGGCGAGGTCACCGGCTCCGACCCCGACGAGCTCGCCCGGCGGCGGCTGGCGCTGGCCAGGGACTACGACAAGGACCTGCTCGATCCAAAGCTCTTCCGGGAGAGGCTCGGCGAGACGTTCCTCGCCACGCGTGAGCTCGCCGCCCGGATGGACATGGCGTGGAAGGAGGACAGGTGGCTGCTGTCCCAGCTTCTCGACGAGAGGAAGGGCCCGACATCGTCGCCGGAGCCGCCATTGACGCGGCAGGAGCACCGGCTCGCCGACCTCCTCGCCGCGCCGCGCGGGAAGCTGCACCCGGCGAGCGTGCTCCTGATGAGCGACTTCCACATGCGGAGGCGCCTCGGGGGGAACGGGAACCTCAAGGAGGTGCAGTGGTTGGGGGAGGCGTTCGCTGTGAAGCACGTCGTCGGCGTCGACGCCGAGGCGGCGGCCGCGGAGGTGGCGGCGCTGGCGTCGGTGTCGCCGCACCCGAACGTGGCGCACTGCCGCTACTGCTTCCACGACGAGGAGAAGAGGGAGCTGTACATGGTGATGGACCAGCTGATGAGCAAGGACCTCGGCAGCTACGTCAAGGAGGTGAACTCCGCCAAGCGCCGGGCGCCGCTCCCGCTCGTCGTCGTCGTCGACACCATGCTGCAGATCGCGTGCGGCATGGCGCACCTGCACTCCAACAAGATGTACCACGGCAACCTCAACCCATCCAACGTGATCGTCAAGCCGCGCCATGGCGACGCCTACCTGCATGTCAAGGTCGCCGGCTTCGTCTCCGGCTCCGGCACGGCGAACGCGGCCAACCCATGCATCTGGTGCGCGCCGGAGGTGGTGGGGAACGAGGCGGCGGCGACGGAGAAGGGCGACGTGTACAGCTTCGGGATGATCTGCTTCGAGCTGATCACCGGGAAGATCCCGTTCGAGGACAACCACCTGCAGGGGGAGAACATGAGCAAGAACATCCGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGTCGCCCAAGTACCTGACCAGCCTGACGCGGCGGTGCTGGCACGGCGAGGCGGCGCAGCGGCCGCCGTTCCACTCCATCTGCCGCGTGCTCCGCTACGTGAAGCGCTTCCTGGTGATGAATAACCCGGAGCAGGCGGCGGCGGACGCGGCTGGAGCCGGGCCGGCGGTGGACTACCTGGACATGGAGGCGCAGCTGCTGAGGAGGTTCCCGGAGTGGGAGGGGAACGGTGTCGCCGACGTGCCGTTCGAGATGTACGCGTACAGGGTGATGGAGAGGGACAAGATGAGCAACGCGTGCAGGGACAGGAGCTCCGACTCCGGCAGCGACGGCAACTCGCTGTGGGGAGATGACAGCGCCAGCGGCGGGTCCAGCACGACGGCGACGGACGCGTCGGCGTCGAGCCGGCCGCTGCTTGACCGGAGCGGCAGCACGAGGTCGTCGCCGCCGCGCAAGGTGGCCATCGCCGCCGCCAAGGCAGGCAAGTGTCGCAGCGGCATTGTTACTCGTCTAAAGCCTTCCTCCAAGATTACAGCTAGCTCCATGTCCGTGACGTGTGCAGGGCCGCCGCAGAAGTCGAGGTCGATGGGCACGGTGAGGCCGCCGCCGGTCGTGGCCCGCCGAACGCCGAGGATTAAGTCCGACGGCCACCTCAATAGGGCGGCAATTCCGCCTACCCGACGGCGTAAATCCGGCGGGAACGCTTCAGACTCGGAGTTAGCTTAGCAAAATGTTGGGTAGCCTTCTTTCTCATATGATGAGAGGTTTTCACTTGTTTCAGAAATACAGTATCAAAACGTCAACAATGAAAAAAATTTCAC]
[+] EMBL AK107091 [ATCCATATCCATAGATAGATAGAAGAAGAATCGAGGAGGAGAAGGAGGAGGATGGAGCAGCTCCGGCAGGTCGGCGAGGCCATCGGCGGCGTCAACGCCCTCATGGCCTTCCACGACGACCTCCGCTGCATCAACCCTCGCCAATGCGCCCTCCTCGCCCACGCCTACGCCCTCGCCTTCCGCGCCGTCGCCGGCGAGCTCCGCGCCCGCCTCCGCTTCCACGACCGCCTCACCAAATGGAAGCCCCTCGACGATCCCCTCCGCGAGCTCCACCGCGTCGTCCGCGACGGCGAGGCCTACATCCGCCACTGCCTCCTCCTCGACCCGGCCCACTGGTGGGCGCGCGCCGCCGCCGCCACGCACGGCACGGAATGCGTCGAGCACCACCTCCACAACCTCCTTTGGTGCGTCTCCGTCGTCGTCGAGGCGGTCGAGAACGTCGGCGAGGTCACCGGCTCCGACCCCGACGAGCTCGCCCGGCGGCGGCTGGCGCTGGCCAGGGACTACGACAAGGACCTGCTCGATCCAAAGCTCTTCCGGGAGAGGCTCGGCGAGACGTTCCTCGCCACGCGTGAGCTCGCCGCCCGGATGGACATGGCGTGGAAGGAGGACAGGTGGCTGCTGTCCCAGCTTCTCGACGAGAGGAAGGGCCCGACATCGTCGCCGGAGCCGCCATTGACGCGGCAGGAGCACCGGCTCGCCGACCTCCTCGCCGCGCCGCGCGGGAAGCTGCACCCGGCGAGCGTGCTCCTGATGAGCGACTTCCACATGCGGAGGCGCCTCGGGGGGAACGGGAACCTCAAGGAGGTGCAGTGGTTGGGGGAGGCGTTCGCTGTGAAGCACGTCGTCGGCGTCGACGCCGAGGCGGCGGCCGCGGAGGTGGCGGCGCTGGCGTCGGTGTCGCCGCACCCGAACGTGGCGCACTGCCGCTACTGCTTCCACGACGAGGAGAAGAGGGAGCTGTACATGGTGATGGACCAGCTGATGAGCAAGGACCTCGGCAGCTACGTCAAGGAGGTGAACTCCGCCAAGCGCCGGGCGCCGCTCCCGCTCGTCGTCGTCGTCGACACCATGCTGCAGATCGCGTGCGGCATGGCGCACCTGCACTCCAACAAGATGTACCACGGCAACCTCAACCCATCCAACGTGATCGTCAAGCCGCGCCATGGCGACGCCTACCTGCATGTCAAGGTCGCCGGCTTCGTCTCCGGCTCCGGCACGGCGAACGCGGCCAACCCATGCATCTGGTGCGCGCCGGAGGTGGTGGGGAACGAGGCGGCGGCGACGGAGAAGGGCGACGTGTACAGCTTCGGGATGATCTGCTTCGAGCTGATCACCGGGAAGATCCCGTTCGAGGACAACCACCTGCAGGGGGAGAACATGAGCAAGAACATCCGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGTCGCCCAAGTACCTGACCAGCCTGACGCGGCGGTGCTGGCACGGCGAGGCGGCGCAGCGGCCGCCGTTCCACTCCATCTGCCGCGTGCTCCGCTACGTGAAGCGCTTCCTGGTGATGAATAACCCGGAGCAGGCGGCGGCGGACGCGGCTGGAGCCGGGCCGGCGGTGGACTACCTGGACATGGAGGCGCAGCTGCTGAGGAGGTTCCCGGAGTGGGAGGGGAACGGTGTCGCCGACGTGCCGTTCGAGATGTACGCGTACAGGGTGATGGAGAGGGACAAGATGAGCAACGCGTGCAGGGACAGGAGCTCCGACTCCGGCAGCGACGGCAACTCGCTGTGGGGAGATGACAGCGCCAGCGGCGGGTCCAGCACGACGGCGACGGACGCGTCGGCGTCGAGCCGGCCGCTGCTTGACCGGAGCGGCAGCACGAGGTCGTCGCCGCCGCGCAAGGTGGCCATCGCCGCCGCCAAGGCAGGCAAGTGTCGCAGCGGCATTGTTACTCGTCTAAAGCCTTCCTCCAAGATTACAGCTAGCTCCATGTCCGTGACGTGTGCAGGGCCGCCGCAGAAGTCGAGGTCGATGGGCACGGTGAGGCCGCCGCCGGTCGTGGCCCGCCGAACGCCGAGGATTAAGTCCGACGGCCACCTCAATAGGGCGGCAATTCCGCCTACCCGACGGCGTAAATCCGGCGGGAACGCTTCAGACTCGGAGTTAGCTTAGCAAAATGTTGGGTAGCCTTCTTTCTCATATGATGAGAGGTTTTCACTTGTTTCAGAAATACAGTATCAAAACGTCAACAATGAAAAAAATTTCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2739#0 TCCTTCTCCTCGTCGGCATCCTGGTCATCGTCCTCCTTTTGCTTTGGAGACTCCTCCCCC 60
consensus_2739#1 ------------------------------------------------------------
consensus_2739#0 TTTCCTTGTTGTCTCTCTTGCGGGATCTCTACGTCAGAGCTCTCGCACCTCTCTCTTAAG 120
consensus_2739#1 ------------------------------------------------------------
consensus_2739#0 CTTTTCTTCTCTGGCCGATCCTTGAAGCAAGACGCCGGTCCATGGTCGGATAAGGATTTC 180
consensus_2739#1 ------------------------------------------------------------
consensus_2739#0 AGACTGCTGCCCTGGTGCCGCGATCCTACAAGCTTGTGAAAGGAATTCAATCCGTGCCAT 240
consensus_2739#1 ------------------------------------------------------------
consensus_2739#0 CCAAAGAAGCAGAGGAAGAAAGAAGCAATCAAGAAGAGCGCGCGCACTTGATCCATCGTC 300
consensus_2739#1 ---------------------------------------ATCCATA-TCCATAGATAGAT 20
* * * ** ** *
consensus_2739#0 CTATCGGCAGGCAAGGCTGATCGCCGATAGGGATGGAGCAGCTCCGGCAACTCGGCGAGG 360
consensus_2739#1 AGAAGAAGAATCGAGGAGGAGAAG-GAGGAGGATGGAGCAGCTCCGGCAGGTCGGCGAGG 79
* * * *** ** ** ******************* *********
consensus_2739#0 CGGTGGGTAGCATCAACGCGCTCATGGCGTTCGAGGACGACCTCCAC---ATCAACCCGC 417
consensus_2739#1 CCATCGGCGGCGTCAACGCCCTCATGGCCTTCCACGACGACCTCCGCTGCATCAACCCTC 139
* * ** ** ******* ******** *** * ********** * ******** *
consensus_2739#0 GGCAGTGCCGCCTCCTCGCCGACGCCTGCGCGCGCGCGCTCGCCGCCGTCACGGGGCAGG 477
consensus_2739#1 GCCAATGCGCCCTCCTCGCCCACGCCTACGCCCTCGCCTTCCGCGCCGTCGCCGGCGAGC 199
* ** *** ********** ****** *** * *** ** ******* * ** **
consensus_2739#0 TTCGCGCCCAGCTCCGCTTCGACGAGCGCGGCGCCAAGTGGCGCGCCATCGAGGCGCCGC 537
consensus_2739#1 TCCGCGCCCGCCTCCGCTTCCACGACCGCCTCACCAAATGGAAGCCCCTCGACGATCCCC 259
* ******* ********* **** *** * **** *** ** **** * ** *
consensus_2739#0 TCCGCGAGCTCCACCGCGCCTTCCGCGACGCCGAGGCGTACGTCAGGCAGTGCCTGGACC 597
consensus_2739#1 TCCGCGAGCTCCACCGCGTCGTCCGCGACGGCGAGGCCTACATCCGCCACTGCCTCCTCC 319
****************** * ********* ****** *** ** * ** ***** **
consensus_2739#0 CCCGC---GGCAGCTGGTGGGCGCGCGCCGCGGCCATGGCGCACGGCACCGAGTGCGTGG 654
consensus_2739#1 TCGACCCGGCCCACTGGTGGGCGCGCGCCGCCGCCGCCACGCACGGCACGGAATGCGTCG 379
* * * * ****************** *** ********** ** ***** *
consensus_2739#0 AGCAGCACCTCCACAATGTCCTGTGGTGCGTCGCCGTCGCGCTCGAGGCCATCGACGCCG 714
consensus_2739#1 AGCACCACCTCCACAACCTCCTTTGGTGCGTCTCCGTCGTCGTCGAGGCGGTCGAGAACG 439
**** *********** **** ********* ****** ******* **** **
consensus_2739#0 CCGGCGAGATCGCCGGCTCCGACCCGGACGAGCTCGCCAGGGGGCGGCTGGTGCTCGCCA 774
consensus_2739#1 TCGGCGAGGTCACCGGCTCCGACCCCGACGAGCTCGCCCGGCGGCGGCTGGCGCTGGCCA 499
******* ** ************* ************ ** ********* *** ****
consensus_2739#0 GGAAGTACGACAGGGACATGCTCGATCCCAAGCTGTTCGAGCACGCGTTCGGCAAGCTAT 834
consensus_2739#1 GGGACTACGACAAGGACCTGCTCGATCCAAAGCTCTTCCGGGAGAGGCTCGGCGAGACGT 559
** * ******* **** ********** ***** *** * * * ***** ** *
consensus_2739#0 ATCTGGTCTCCCAAGAGCTCGTTGCAAGGATGGACATGGCGTGGAAGGAGGACAGATGGG 894
consensus_2739#1 TCCTCGCCACGCGTGAGCTCGCCGCCCGGATGGACATGGCGTGGAAGGAGGACAGGTGGC 619
** * * * * ******* ** **************************** ***
consensus_2739#0 TGATATCGCAAATGTTCGACGAAATGAAAGGCCCTGCGGCGTCG---AAACCTC---TGA 948
consensus_2739#1 TGCTGTCCCAGCTTCTCGACGAGAGGAAGGGCCCGACATCGTCGCCGGAGCCGCCATTGA 679
** * ** ** * ******* * *** ***** * ***** * ** * ***
consensus_2739#0 GCAAAAACGAGCACCGCCTCGCCGAGCTCCCTCGCCGCGGCGATGGGGAAGCTGCACCCG 1008
consensus_2739#1 CGCGGCAGGAGCACCGGCTCGCCGA-CCTCCTCGCCGCGCCGCGCGGGAAGCTGCACCCG 738
* ******** ******** * ********** ** ***************
consensus_2739#0 GCATCTGTCCTTCTTGGCAGCGACTACAGCGTCCGGAGGCGGGCTCGG-----CGGCCGG 1063
consensus_2739#1 GCGAGCGTGCTCCTGATGAGCGACTTCCACATGCGGAGGCGCCTCGGGGGGAACGGGAAC 798
** ** ** ** ******* * * * ******** ** ***
consensus_2739#0 CTCAAGGAGGTGCATTGGATGGGGGAGAGCTNTGCGATGAAGCATTTCATCGGGG---AC 1120
consensus_2739#1 CTCAAGGAGGTGCAGTGGTTGGGGGAGGCGTTCGCTGTGAAGCACGTCGTCGGCGTCGAC 858
************** *** ******** * ** ******* ** **** * **
consensus_2739#0 ACCGATGCCGCCGGCGCCGAGGTCGCGCTCCTGTGTTCGGTGGCGC---ACCCGAACGTC 1177
consensus_2739#1 GCCGAGGCGGCGGCCGCGGAGGTGGCGGCGCTGGCGTCGGTGTCGCCGCACCCGAACGTG 918
**** ** ** * *** ***** *** *** ****** *** **********
consensus_2739#0 GCGCAC-GCCGCGTACTGCTTCCACGACGAGGAGAAGAAAGAGTACTTCTTGGTCATGGA 1236
consensus_2739#1 GCGCACTGCCGC-TACTGCTTCCACGACGAGGAGAAGAGGGAGCTGTACATGGTGATGGA 977
****** ***** ************************* *** * * **** *****
consensus_2739#0 CCAGCTCATGGCCAAGGACCTCGGGAGCTACGTCAAGGAGGTGAGCTGCCCGCGGCGGCG 1296
consensus_2739#1 CCAGCTGATGAGCAAGGACCTCGGCAGCTACGTCAAGGAGGTGAACTCCGCCAAGCGCCG 1037
****** *** ************ ******************* ** * * *** **
consensus_2739#0 GATCCCGTTCCCGCTCGTCGTCGCCGTCGACATTATGCTGCAGATCGCGCGCGGGATGGA 1356
consensus_2739#1 GGCGCCGCTCCCGCTCGTCGTCGTCGTCGACACCATGCTGCAGATCGCGTGCGGCATGGC 1097
* *** *************** ******** *************** **** ****
consensus_2739#0 GTATCTGCACGCGAAGAGGATAAACCACGGCGAGCTGAACCCCTCCAACGTGCTCGTCAA 1416
consensus_2739#1 GCACCTGCACTCCAACAAGATGTACCACGGCAACCTCAACCCATCCAACGTGATCGTCAA 1157
* * ****** * ** * *** ******** * ** ***** ********* *******
consensus_2739#0 GCCGCGCCAACCCGATGGCGGCTACGTGCATGTCAAGGTCGCCGGATATGGGCAGCCAGC 1476
consensus_2739#1 GCCGCGCCA---TGGCGACGCCTACCTGCATGTCAAGGTCGCCGGCT------------- 1201
********* * * ** **** ******************* *
consensus_2739#0 TGGCATCACAGCCGGCGGCGCAAAAGCTTCCGCCAATGGCAACGCCAACGGCAACGACAA 1536
consensus_2739#1 -----TCGTCTCCGGC------------TCCGGCACGGCGAACGC----GGC-----CAA 1235
** ***** **** ** * ***** *** ***
consensus_2739#0 CTCCTGCATCTGGTACGCGCCGGAGGTGCTCAGGTCCGACGGCGTCGCGGACGCCGCGGC 1596
consensus_2739#1 CCCATGCATCTGGTGCGCGCCGGAGGTG---------------GTGGGGAACGAGGCGGC 1280
* * ********** ************* ** * * *** *****
consensus_2739#0 GGCGGGGAGGTGCACCGAGAAGGCCGACGTGTACAGCTTCGCCATGATCTGCTTCGAGCT 1656
consensus_2739#1 GGCG---------ACGGAGAAGGGCGACGTGTACAGCTTCGGGATGATCTGCTTCGAGCT 1331
**** ** ******* ***************** *****************
consensus_2739#0 GCTGACCGGCAAGGTGCCGTTCGAGGACAACCACCTGCAGGGCGACAAGACGAGCAAGAA 1716
consensus_2739#1 GATCACCGGGAAGATCCCGTTCGAGGACAACCACCTGCAGGGGGAGAACATGAGCAAGAA 1391
* * ***** *** * ************************** ** ** * *********
consensus_2739#0 CATCTGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGGCGCCCAAGTACCTCACCGCGCT 1776
consensus_2739#1 CATCCGCGCCGGCGAGCGGCCGCTGTTCCCGTTCCAGTCGCCCAAGTACCTGACCAGCCT 1451
**** ******************************** ************* *** **
consensus_2739#0 GACGAAGCGGTGCTGGCACGCCGACCCGGCGCAGCGGCTGGCGTTCGCCTCCATCTGCCG 1836
consensus_2739#1 GACGCGGCGGTGCTGGCACGGCGAGGCGGCGCAGCGGCCGCCGTTCCACTCCATCTGCCG 1511
**** ************** *** ************ * ***** ************
consensus_2739#0 CGTCCTCCGGTACGTCAAGCGGTTCCTGATCCTGAACCCGGAGCAGCAGCAGCAGCAGCA 1896
consensus_2739#1 CGTGCTCCGCTACGTGAAGCGCTTCCTGGTGATGAAT---AACCCGGAGCAG--GCGGCG 1566
*** ***** ***** ***** ****** * **** * * * ***** ** **
consensus_2739#0 GCAGGGCCAGACCGACGACGCGCCCAAGCCGGCCGTCGACTACCTCGACATCGAGGCGCA 1956
consensus_2739#1 GC-GGACGCGGCTGGAG------CCGGGCCGGCGGTGGACTACCTGGACATGGAGGCGCA 1619
** ** * * * * * ** ****** ** ******** ***** ********
consensus_2739#0 GCTGCTGAAGAAGCTCCCGGCGTGGCAGCGTGGCGGCGAGGCGCCGCGCGTCGCCGACGT 2016
consensus_2739#1 GCTGCTGAGGAGGTTCCCGGAGTGGGAGGGGAACG------------GTGTCGCCGACGT 1667
******** ** * ****** **** ** * ** * ***********
consensus_2739#0 GCCGTTCCAGATGTTCGCGTACAGGGTCATGGAGAGGGAGAAGGCCGCCGGCGCCGTGCA 2076
consensus_2739#1 GCCGTTCGAGATGTACGCGTACAGGGTGATGGAGAGGGACAAGATGAGCAACGC-GTGCA 1726
******* ****** ************ *********** *** * *** *****
consensus_2739#0 CGTCGCCAAGGACAGGGCCTCGGATTCGGGCAGCGACGGGAACTCGCTGTACGGCGACGA 2136
consensus_2739#1 --------GGGACAGGAGCTCCGACTCCGGCAGCGACGGCAACTCGCTGTGGGGAGATGA 1778
******* *** ** ** *********** ********** ** ** **
consensus_2739#0 GAACGGGTTCGGTGCAATGTCGCCGGAGCACACCTTCTCCGCCG-TGTCGAACGGCACCC 2195
consensus_2739#1 CAGCGCCAGCGGCG-GGTCCAGCACGACGGCGACGGACGCGTCGGCGTCGAGCCGGCCGC 1837
* ** *** * * ** ** * * ** ** ***** * * * *
consensus_2739#0 TGCGGTCGCGGCCGGCCAGCAGCGACGGCAGGTTGCCGACGGCCAAGAAGGCGGACGGCA 2255
consensus_2739#1 TGCT----TGACCGG--AGCGGCAGCACGAGGTCGTCGCCGCCGCGCAAGGTGGCCATCG 1891
*** * **** *** ** * **** * ** ** * **** ** * *
consensus_2739#0 AGGC-GCCCAGGCAAGCAGG-GCCACAGCCGAAG-GTGAAACCCGTGAACACGGCGGCGA 2312
consensus_2739#1 CCGCCGCCAAGGCAGGCAAGTGTCGCAGCGGCATTGTTACTCGTCTAAAGCCTTCCTCCA 1951
** *** ***** *** * * * **** * * ** * * * ** * * * *
consensus_2739#0 GGACTCCGCACTCGGCAAGGCGGGCGCTCGGCGTG-AAGCCCGACGATCACCTCCAGACC 2371
consensus_2739#1 AGATT--ACAGCTAGCTCCATGTCCGTGACGTGTGCAGGGCCGCCGCAGAAGTCGAGGTC 2009
** * ** ** * ** * *** * * *** ** * ** ** *
consensus_2739#0 AACGG---CGCTCCCACCGCCCGCCGGAGGACGCCCGAGATGGCCTCAGAATAGCAGCGC 2428
consensus_2739#1 GATGGGCACGGTGAGGCCGCC-GCCGGTCGTGGCCCGC--CGAACGCCGAGGATTAAGTC 2066
* ** ** * ***** ***** * ***** * * * ** * * *
consensus_2739#0 AAGCTGCTCTCGTGTTCGTGTTCGTGATCGAGTTTAATGGGTAGAACGCGTTCGATGGAG 2488
consensus_2739#1 CGACGGCCACCTCAATAG-GGCGGCAATTCCGCCTACCCGACGGCGTAAATCCGGCGGGA 2125
* ** * * * * * ** * ** * * * ** **
consensus_2739#0 ACGGTTCTTTCCTCTTTCCTTCCGTAGCACAGCGTCTTTTTGCCAGGGGAACCCGAACCT 2548
consensus_2739#1 ACGCTTCAGAC-TCGGAGTTAGCTTAGCAAAATGTT---------GGGTAGCCTT--CTT 2173
*** *** * ** * * ***** * ** *** * ** * *
consensus_2739#0 GCAGGGGCATATCAATGGAGGTTTTGCACGCTACTCATTTGCGTGGAACGAAATCCCACG 2608
consensus_2739#1 TCT----CATATGATGAGAGGTTTT-CACTTGTTTCAGAAATACAGTATCAAAACGTCAA 2228
* ***** * ******** *** *** * * *** *
consensus_2739#0 TGTTAGGAATCCTTGTGGATTGAAAATGAACGGGTTT 2645
consensus_2739#1 CAATGAAAAAAATTTCAC------------------- 2246
* ** **
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||