Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2744 cluster # 2744       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2744#0 length = 1063 sequences # 2  
consensusID : consensus_2744#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1063
fasta sequence 
                              [GGCGAAGCCGACGTGGGCGCCGCACTTGCGGCAGAGGAGGCGCGTCCGCCGCGTGAAGAGGCGGCGCGCGCGCACGTCCACGCACCGGAACTCGTCCACGTGCCCGAACCTCGCGTCGTCGATGGCGCCGAACCTCACCACCCCCCGCCGCCTCCGGTATCCCCCGCCGCCGCCGGCGACGACCATCCCCGCCGTGTCCCTCGCCGACGAGCTCAGCTTCAGGTCGTACCCGCACGCCCCGCAGCTGACAACACATACACATTTCATCCATTCGTAAGCTACTCCTTACTAATTAATCCTACTTAATTAATACCGTATATTAATTAATCTGCCAAGCTAGCTTGGATCAAGAAAGAAGATGATGATCGTAATCAGAGACTGACCAGTAGGAGACAGTGGAGAGGCTACTGGGAAGATCAAGAGCTGGCTGATCTGGCTTCTTCATCGCCATTGACGAGCTGATCGAGCTCAGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGTCGTAGTTAGCACACTACTCCTTAATTAACTAACTAGATTCTGCTGGATGGGTTGGTAGTTGATGATGTTGTGTTCACCAATCGACGAGCTCATCGAGAAATGGGGGAGTTTATATATGGTTCAATGCGTGTGGAATTCAGAGGAAAGCTGGGGCGGCTAATGATTTTGCGAGGAAATTGGGCGGGAGAACGTGTGGGTCAGGACCGACCACGGCAGTGATATTAATGCAGGTTAGTACAGTATGATTCATTGATGTGGCCGGTGCTCCCAGCGCCACGGCGTCGATCGATCGATCATTCCATCGCACGTTCCAACCAACCCAATCAATCATCGACCCTGGAATCTGGATAAGCACTAATAATAGTATTATCATCGACTCTTTTTTTTTTCTTATCTTGATGATACAAAACTGAGAGAATCACAGTGCACATGTAGGAGTGCTACAACTTTTAAAGTAAACAACAATGATTTAATTAAGTATTTGTTTTGTGTACTCTAGCCAAGAGAAAAGGAATAGTAAAGGAAAAGGGAGAAGTCAACGCC]

[+] EMBL CB684223             [GGCGAAGCCGACGTGGGCGCCGCACTTGCGGCAGAGGAGGCGCGTCCGCCGCGTGAAGAGGCGGCGCGCGCGCACGTCCACGCACCGGAACTCGTCCACGTGCCCGAACCTCGCGTCGTCGATGGCGCCGAACCTCACCACCCCCCGCCGCCTCCGGTATCCCCCGCCGCCGCCGGCGACGACCATCCCCGCCGTGTCCCTCGCCGACGAGCTCAGCTTCAGGTCGTACCCGCACGCCCCGCAGCTGACAACACATACACATTTCATCCATTCGTAAGCTACTCCTTACTAATTAATCCTACTTAATTAATACCGTATATTAATTAATCTGCCAAGCTAGCTTGGATCAAGAAAGAAGATGATGATCGTAATCAGAGACTGACCAGTAGGAGACAGTGGAGAGGCTACTGGGAAGATCAAGAGCTGGCTGATCTGGCTTCTTCATCGCCATTGACGAGCTGATCGAGCTCAGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGTCGTAGTTAGCACACTACTCCTTAATTAACTAACTAGATTCTGCTGGATGGGTTGGTAGTTGATGATGTTGTGTTCACCAATCGACGAGCTCATCGAGAAATGGGGGAGTTTATATATGGTTCAATGCGTGTGGAATTCAGAGGAAAGCTGGGGCGGCTAATGATTTTGCGAGGAAATTGGGCGGGAGAACGTGTGGGTCAGGACCGACCACGGCAGTGATATTAATGCAGGTTAGTACAGTATGATTCATTGATGTGGCCGGTGCTCCCAGCGCCACGGCGTCGATCGATCGATCATTCCATCGCACGTTCCA                                                                                                                                                                                                                                      ]
[-] EMBL CB684224             [                                                                                                                                                                                                                                                                                                                                    TAATCTGCCAAGCTAGCTTGGATCAAGAAAGAAGATGATGATCGTAATCAGAGACTGACCAGTAGGAGACAGTGGAGAGGCTACTGGGAAGATCAAGAGCTGGCTGATCTGGCTTCTTCATCGCCATTGACGAGCTGATCGAGCTCAGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGTCGTAGTTAGCACACTACTCCTTAATTAACTAACTAGATTCTGCTGGATGGGTTGGTAGTTGATGATGTTGTGTTCACCAATCGACGAGCTCATCGAGAAATGGGGGAGTTTATATATGGTTCAATGCGTGTGGAATTCAGAGGAAAGCTGGGGCGGCTAATGATTTTGCGAGGAAATTGGGCGGGAGAACGTGTGGGTCAGGACCGACCACGGCAGTGATATTAATGCAGGTTAGTACAGTATGATTCATTGATGTGGCCGGTGCTCCCAGCGCCACGGCGTCGATCGATCGATCATTCCATCGCACGTTCCAACCAACCCAATCAATCATCGACCCTGGAATCTGGATAAGCACTAATAATAGTATTATCATCGACTCTTTTTTTTTTCTTATCTTGATGATACAAAACTGAGAGAATCACAGTGCACATGTAGGAGTGCTACAACTTTTAAAGTAAACAACAATGATTTAATTAAGTATTTGTTTTGTGTACTCTAGCCAAGAGAAAAGGAATAGTAAAGGAAAAGGGAGAAGTCAACGCC]




>consensus_2744#0
GGCGAAGCCGACGTGGGCGCCGCACTTGCGGCAGAGGAGGCGCGTCCGCCGCGTGAAGAG
GCGGCGCGCGCGCACGTCCACGCACCGGAACTCGTCCACGTGCCCGAACCTCGCGTCGTC
GATGGCGCCGAACCTCACCACCCCCCGCCGCCTCCGGTATCCCCCGCCGCCGCCGGCGAC
GACCATCCCCGCCGTGTCCCTCGCCGACGAGCTCAGCTTCAGGTCGTACCCGCACGCCCC
GCAGCTGACAACACATACACATTTCATCCATTCGTAAGCTACTCCTTACTAATTAATCCT
ACTTAATTAATACCGTATATTAATTAATCTGCCAAGCTAGCTTGGATCAAGAAAGAAGAT
GATGATCGTAATCAGAGACTGACCAGTAGGAGACAGTGGAGAGGCTACTGGGAAGATCAA
GAGCTGGCTGATCTGGCTTCTTCATCGCCATTGACGAGCTGATCGAGCTCAGCTGCTGCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGTCGTAGTTAGCACACTACTCC
TTAATTAACTAACTAGATTCTGCTGGATGGGTTGGTAGTTGATGATGTTGTGTTCACCAA
TCGACGAGCTCATCGAGAAATGGGGGAGTTTATATATGGTTCAATGCGTGTGGAATTCAG
AGGAAAGCTGGGGCGGCTAATGATTTTGCGAGGAAATTGGGCGGGAGAACGTGTGGGTCA
GGACCGACCACGGCAGTGATATTAATGCAGGTTAGTACAGTATGATTCATTGATGTGGCC
GGTGCTCCCAGCGCCACGGCGTCGATCGATCGATCATTCCATCGCACGTTCCAACCAACC
CAATCAATCATCGACCCTGGAATCTGGATAAGCACTAATAATAGTATTATCATCGACTCT
TTTTTTTTTCTTATCTTGATGATACAAAACTGAGAGAATCACAGTGCACATGTAGGAGTG
CTACAACTTTTAAAGTAAACAACAATGATTTAATTAAGTATTTGTTTTGTGTACTCTAGC
CAAGAGAAAAGGAATAGTAAAGGAAAAGGGAGAAGTCAACGCC

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)