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Oryza sativa
cluster # 2750 cluster # 2750       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2750#0 length = 1622 sequences # 2  

consensusID : consensus_2750#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1622
fasta sequence
                              [CGCTAGCTATCGATCGATCGGTCGATCCAAGCTGCAGACACAATATTAATTCAATTCAATTGAATTCTTCGATCATCCATGGCGACGGCGCAGCAGGAGAGCATCAGCAGCGGTGGTGACGGCAACAATAATAATAATAAGCAGGTGGCGGTGGTGGTTGTTGAGGAGGCGTCGACGCCGTCGTCGGCCTTCAAGTTCAACGTGCACGCGCCGGAGTTCGTGCCTGCCATGTCGCCGACGGCCAGTCCGATGTCGGCGCCCGCCGGCAGCAGCAGCTTCTACTCCCCCTTCGGGCTCCACGTGCAGCCCGATCACTGGAGCTTCTTCCATGACCACGAGCCCGTCTTCTTCATGCCCGACTTCAAGTTCGCCGCCGCCGCCGCCGCCAGCGCGCAGCCCAAGCCCACCTCCGCCGCCGACATGCCCCACAAGATCGTCAAGCAGGTCGAGTACCAATTCAGCGACATTAACCTCGTCGCCAACGAGTTCTTGCTCAAGATCATGAACAAAGATTCTGAAGGTTACGTCCCCTTATCCGTGATTGCTTCTTGGAAGAAGATCAAGTCTCTTGGAGCAACCAATCAAATGCTGGTCAAGGCTCTTCGCACCTCCACCAAGCTGATTGTGAGTGATGACGGCAAGAAAGTCCGGCGGAGGCAGCCATTCACGGAGAAGCACAAGGAGGAGCTTCAGTCAAGGATGATCATAGCTGAGAATTTGCCAGAGGACTCATCGAGAAACAGCCTGGAGAAAATCTTCGGTGTCGTTGGAAGTGTGAAGAACATAAAGATGTGCCACCCTCAAGAGCCTAGCACGGCAAGAGCTTCCAAGTCAGACACTCTAGTCAGTAACAAGATGCATGCACTGGTGGAGTACGAGAGCTCGCAGCAAGCTGAGAAAGCAGTGGAGAAGCTGAACGACGAACGGAACTGGAGGAAAGGCCTTCGGGTGCGCACCGTCCTCAGGCGATCGCCCAAGTCGGTGATGAGGCTGAAGCGGACGGAGTTCGACCTCAACTCGGACGACGAGCAGTCACCGATGTCGTCGGACTTATCCCCCACGGCGACGGCGACGGCGGCGGAGTTGTCGGCGGAGGCGGCGGGTCACGATCAGGGCGGGGAGCAGCAGATGATGAACAGCAGCAAGAAAGGAGGAGGGTGGGCGCGAGGGGGCCGAGGGAAGCTGCAGGTGGCGGCGCCGCACAGCCCGCAGTCGGCCCCCGCCGGCAGTGTGGGGCACTTCGAGCCGGCGAGCCCTCGTCACAAGCTGCCGGCGAGCCCCCGCCACAAGTGCCCCTCCAGCCCACGCCAGCCGCCTCCTCACGCCCACGGCCCCAGGATGCCCGACGGCACCCGCGGCTTCACCATGGGCCGCGGCAAGCCCCTCCTTGTCTAGCTCCGATCCAGTCACATCACATCTCTACGTGTACGATTGCATACATGCCATGGATACTTCAGGCCCTCGATCGATCTTCTCTCCTTTCATTTTCTCCTCTTCTCTTGTCTTCTTCTTCTTCTTCTTTCTTTATTTTTTGGATTTTCACACCCCTTAAATAAAGAGCAACGGACTGGCTGTCTGCTATATCATATTCAAATACTTCAAGGTTATAATATTTTTTTTGT]

[+] EMBL AK100796             [CGCTAGCTATCGATCGATCGGTCGATCCAAGCTGCAGACACAATATTAATTCAATTCAATTGAATTCTTCGATCATCCATGGCGACGGCGCAGCAGGAGAGCATCAGCAGCGGTGGTGACGGCAACAATAATAATAATAAGCAGGTGGCGGTGGTGGTTGTTGAGGAGGCGTCGACGCCGTCGTCGGCCTTCAAGTTCAACGTGCACGCGCCGGAGTTCGTGCCTGCCATGTCGCCGACGGCCAGTCCGATGTCGGCGCCCGCCGGCAGCAGCAGCTTCTACTCCCCCTTCGGGCTCCACGTGCAGCCCGATCACTGGAGCTTCTTCCATGACCACGAGCCCGTCTTCTTCATGCCCGACTTCAAGTTCGCCGCCGCCGCCGCCGCCAGCGCGCAGCCCAAGCCCACCTCCGCCGCCGACATGCCCCACAAGATCGTCAAGCAGGTCGAGTACCAATTCAGCGACATTAACCTCGTCGCCAACGAGTTCTTGCTCAAGATCATGAACAAAGATTCTGAAGGTTACGTCCCCTTATCCGTGATTGCTTCTTGGAAGAAGATCAAGTCTCTTGGAGCAACCAATCAAATGCTGGTCAAGGCTCTTCGCACCTCCACCAAGCTGATTGTGAGTGATGACGGCAAGAAAGTCCGGCGGAGGCAGCCATTCACGGAGAAGCACAAGGAGGAGCTTCAGTCAAGGATGATCATAGCTGAGAATTTGCCAGAGGACTCATCGAGAAACAGCCTGGAGAAAATCTTCGGTGTCGTTGGAAGTGTGAAGAACATAAAGATGTGCCACCCTCAAGAGCCTAGCACGGCAAGAGCTTCCAAGTCAGACACTCTAGTCAGTAACAAGATGCATGCACTGGTGGAGTACGAGAGCTCGCAGCAAGCTGAGAAAGCAGTGGAGAAGCTGAACGACGAACGGAACTGGAGGAAAGGCCTTCGGGTGCGCACCGTCCTCAGGCGATCGCCCAAGTCGGTGATGAGGCTGAAGCGGACGGAGTTCGACCTCAACTCGGACGACGAGCAGTCACCGATGTCGTCGGACTTATCCCCCACGGCGACGGCGACGGCGGCGGAGTTGTCGGCGGAGGCGGCGGGTCACGATCAGGGCGGGGAGCAGCAGATGATGAACAGCAGCAAGAAAGGAGGAGGGTGGGCGCGAGGGGGCCGAGGGAAGCTGCAGGTGGCGGCGCCGCACAGCCCGCAGTCGGCCCCCGCCGGCAGTGTGGGGCACTTCGAGCCGGCGAGCCCTCGTCACAAGCTGCCGGCGAGCCCCCGCCACAAGTGCCCCTCCAGCCCACGCCAGCCGCCTCCTCACGCCCACGGCCCCAGGATGCCCGACGGCACCCGCGGCTTCACCATGGGCCGCGGCAAGCCCCTCCTTGTCTAGCTCCGATCCAGTCACATCACATCTCTACGTGTACGATTGCATACATGCCATGGATACTTCAGGCCCTCGATCGATCTTCTCTCCTTTCATTTTCTCCTCTTCTCTTGTCTTCTTCTTCTTCTTCTTTCTTTATTTTTTGGATTTTCACACCCCTTAAATAAAGAGCAACGGACTGGCTGTCTGCTATATCATATTCAAATACTTCAAGGTTATAATATTTTTTTTGT]
[+] EMBL AK100327             [CGCTAGCTATCGATCGATCGGTCGATCCAAGCTGCAGACACAATATTAATTCAATTCAATTGAATTCTTCGATCATCCATGGCGACGGCGCAGCAGGAGAGCATCAGCAGCGGTGGTGACGGCAACAATAATAATAATAAGCAGGTGGCGGTGGTGGTTGTTGAGGAGGCGTCGACGCCGTCGTCGGCCTTCAAGTTCAACGTGCACGCGCCGGAGTTCGTGCCTGCCATGTCGCCGACGGCCAGTCCGATGTCGGCGCCCGCCGGCAGCAGCAGCTTCTACTCCCCCTTCGGGCTCCACGTGCAGCCCGATCACTGGAGCTTCTTCCATGACCACGAGCCCGTCTTCTTCATGCCCGACTTCAAGTTCGCCGCCGCCGCCGCCGCCAGCGCGCAGCCCAAGCCCACCTCCGCCGCCGACATGCCCCACAAGATCGTCAAGCAGGTCGAGTACCAATTCAGCGACATTAACCTCGTCGCCAACGAGTTCTTGCTCAAGATCATGAACAAAGATTCTGAAGGTTACGTCCCCTTATCCGTGATTGCTTCTTGGAAGAAGATCAAGTCTCTTGGAGCAACCAATCAAATGCTGGTCAAGGCTCTTCGCACCTCCACCAAGCTGATTGTGAGTGATGACGGCAAGAAAGTCCGGCGGAGGCAGCCATTCACGGAGAAGCACAAGGAGGAGCTTCAGTCAAGGATGATCATAGCTGAGAATTTGCCAGAGGACTCATCGAGAAACAGCCTGGAGAAAATCTTCGGTGTCGTTGGAAGTGTGAAGAACATAAAGATGTGCCACCCTCAAGAGCCTAGCACGGCAAGAGCTTCCAAGTCAGACACTCTAGTCAGTAACAAGATGCATGCACTGGTGGAGTACGAGAGCTCGCAGCAAGCTGAGAAAGCAGTGGAGAAGCTGAACGACGAACGGAACTGGAGGAAAGGCCTTCGGGTGCGCACCGTCCTCAGGCGATCGCCCAAGTCGGTGATGAGGCTGAAGCGGACGGAGTTCGACCTCAACTCGGACGACGAGCAGTCACCGATGTCGTCGGACTTATCCCCCACGGCGACGGCGACGGCGGCGGAGTTGTCGGCGGAGGCGGCGGGTCACGATCAGGGCGGGGAGCAGCAGATGATGAACAGCAGCAAGAAAGGAGGAGGGTGGGCGCGAGGGGGCCGAGGGAAGCTGCAGGTGGCGGCGCCGCACAGCCCGCAGTCGGCCCCCGCCGGCAGTGTGGGGCACTTCGAGCCGGCGAGCCCTCGTCACAAGCTGCCGGCGAGCCCCCGCCACAAGTGCCCCTCCAGCCCACGCCAGCCGCCTCCTCACGCCCACGGCCCCAGGATGCCCGACGGCACCCGCGGCTTCACCATGGGCCGCGGCAAGCCCCTCCTTGTCTAGCTCCGATCCAGTCACATCACATCTCTACGTGTACGATTGCATACATGCCATGGATACTTCAGGCCCTCGATCGATCTTCTCTCCTTTCATTTTCTCCTCTTCTCTTCTCTTCTTCTTCTTCTTCTTTCTTTATTTTTTGGATTTTCACACCCCTTAAATAAAGAGCAACGGACTGGCTGTCTGCTATATCATATTCAAATACT                        ]


>consensus_2750#0 CGCTAGCTATCGATCGATCGGTCGATCCAAGCTGCAGACACAATATTAATTCAATTCAAT TGAATTCTTCGATCATCCATGGCGACGGCGCAGCAGGAGAGCATCAGCAGCGGTGGTGAC GGCAACAATAATAATAATAAGCAGGTGGCGGTGGTGGTTGTTGAGGAGGCGTCGACGCCG TCGTCGGCCTTCAAGTTCAACGTGCACGCGCCGGAGTTCGTGCCTGCCATGTCGCCGACG GCCAGTCCGATGTCGGCGCCCGCCGGCAGCAGCAGCTTCTACTCCCCCTTCGGGCTCCAC GTGCAGCCCGATCACTGGAGCTTCTTCCATGACCACGAGCCCGTCTTCTTCATGCCCGAC TTCAAGTTCGCCGCCGCCGCCGCCGCCAGCGCGCAGCCCAAGCCCACCTCCGCCGCCGAC ATGCCCCACAAGATCGTCAAGCAGGTCGAGTACCAATTCAGCGACATTAACCTCGTCGCC AACGAGTTCTTGCTCAAGATCATGAACAAAGATTCTGAAGGTTACGTCCCCTTATCCGTG ATTGCTTCTTGGAAGAAGATCAAGTCTCTTGGAGCAACCAATCAAATGCTGGTCAAGGCT CTTCGCACCTCCACCAAGCTGATTGTGAGTGATGACGGCAAGAAAGTCCGGCGGAGGCAG CCATTCACGGAGAAGCACAAGGAGGAGCTTCAGTCAAGGATGATCATAGCTGAGAATTTG CCAGAGGACTCATCGAGAAACAGCCTGGAGAAAATCTTCGGTGTCGTTGGAAGTGTGAAG AACATAAAGATGTGCCACCCTCAAGAGCCTAGCACGGCAAGAGCTTCCAAGTCAGACACT CTAGTCAGTAACAAGATGCATGCACTGGTGGAGTACGAGAGCTCGCAGCAAGCTGAGAAA GCAGTGGAGAAGCTGAACGACGAACGGAACTGGAGGAAAGGCCTTCGGGTGCGCACCGTC CTCAGGCGATCGCCCAAGTCGGTGATGAGGCTGAAGCGGACGGAGTTCGACCTCAACTCG GACGACGAGCAGTCACCGATGTCGTCGGACTTATCCCCCACGGCGACGGCGACGGCGGCG GAGTTGTCGGCGGAGGCGGCGGGTCACGATCAGGGCGGGGAGCAGCAGATGATGAACAGC AGCAAGAAAGGAGGAGGGTGGGCGCGAGGGGGCCGAGGGAAGCTGCAGGTGGCGGCGCCG CACAGCCCGCAGTCGGCCCCCGCCGGCAGTGTGGGGCACTTCGAGCCGGCGAGCCCTCGT CACAAGCTGCCGGCGAGCCCCCGCCACAAGTGCCCCTCCAGCCCACGCCAGCCGCCTCCT CACGCCCACGGCCCCAGGATGCCCGACGGCACCCGCGGCTTCACCATGGGCCGCGGCAAG CCCCTCCTTGTCTAGCTCCGATCCAGTCACATCACATCTCTACGTGTACGATTGCATACA TGCCATGGATACTTCAGGCCCTCGATCGATCTTCTCTCCTTTCATTTTCTCCTCTTCTCT TGTCTTCTTCTTCTTCTTCTTTCTTTATTTTTTGGATTTTCACACCCCTTAAATAAAGAG CAACGGACTGGCTGTCTGCTATATCATATTCAAATACTTCAAGGTTATAATATTTTTTTT GT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)