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Oryza sativa
cluster # 2784 cluster # 2784       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2784#0 length = 1535 sequences # 2  

consensusID : consensus_2784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1535
fasta sequence
                              [CCACGACGATGGCGGCGGTGCAGCTCCTTCCCCTTCCTCCCGCCGCCCCTCCTCAGCCGCGCCGCGGCAAACCTGGTTGCTGGAACACGCCGCCAGCGCCGCCGAAGGTTTGCCACTACTGGAAGTCCGGCAGGTGCAGCCGGAACCCCTGCCGATTCCTCCACACCGACGCGCCTGATCCGGCGCCGCCGATCGCCGCCGTCAACACGCGCAGCAACACGTGGGTCAACCCGTCCTGCGTCGCCGCGAATTCGGATGGCAAGGGTAGGGCTCCTCCGGTTCAGCCGGCGAAGCGGCAGGTTGAGGCGCCGCCGGAAACGCCTGCCAAGCGCCGATGCGGCGGCGGCGCGTGGTGCGTCGGCGACGGCTTCTGCGGCGTCGCGCGGCTCAAGGGTCACGCCAAGGCGGTCACCGGCTTCGCGCTGCCGGAAGGGTCGGACAAGCTGTTCTCCGGCAGCCTGGACAGCACGGTGCGCGCCTGGGACTGCAGCACCGGGCAGTGCGTCCGCGTCGAGGAGATGCAAGAAGGGGAGGTGCACAAGCTGATCGCCATGGGCCCGTGGGTCCTCGCCGGCGTGCGCGGCGCCGTCAAGGCGATCCACACGGGGACCGGCAAGGAGCTCCGGCTGCGAGGGCCCGCGTCGCAGATCACCGCCATGCTAGCCGAGGACGAGGACCACCTCTTCGCCGGCGCGGAGGACGGTGCCGTGTTCATGTGGAGGATGAACCAAGAACAGCAATCGTTCGACGAGGTCGCCGCGCTCACCGGCCACTACAAGGCCGTCGTGTCGCTCGCGCAGGGCAAGGGCGCGCTCTACTCCGGCTCAACAGACGGCAGCATCAGGGTCTGGGACCTCGACACCCACCGCTGCATCTACAGCTTCGCCGGCCACTCGTCGACGGTCACCGCATTGCTCTGCTGGGAGCGGTTCTTGCTCTCCTCGTCCGACGATGGCACCGTGAAGGTCTGGCAGTGGAAGCCTGATCACGACGACCTCGACCTCGAGGTGCACTACACCCACAAGGAAGACGAACGGGTCGTTTCCATGGACGGAACGTACGACGCCGACGAGAAGCCCGTGCTGCTTGTCTCCCGCGGCGATGGCGTTGTCCGTGTCTACGATCTCCCGTCGCTGAAGAAGAGAGGGGATATTATCTGCGACGACGAGGTCAGGACGATATCCGTCAGGTCGCGCGGCGTCGTCTTCACCGGAGATGCGTCCGGCGAGGTCAGAGTGGTGAAGTGGACATCACTGAGTGATGCAGCAGAGTCTTATTTAGCTATGGCCTGAATTAGTTTTGATTTAAGAGAACCATCAGCCAATTTTTGCTTTGTGGTCTTGTGATTCAGTACTCCGATGTATGTAGTGTACACAACGTTGTAAACA-GTGGAACCGCTACGCGGCTTGTGAATACTACTCCCTCCGTTTTGTAACGGTGTGAGGCTCAAGGTTAAATCTGAATGAATTTTTAGTTCAGATCTGCCTGTTTGTAATTATTAATGTTTTGATTTAAGAGAACCATCAGGGAGTTTT]

[+] EMBL AK106243             [CCACGACGATGGCGGCGGTGCAGCTCCTTCCCCTTCCTCCCGCCGCCCCTCCTCAGCCGCGCCGCGGCAAACCTGGTTGCTGGAACACGCCGCCAGCGCCGCCGAAGGTTTGCCACTACTGGAAGTCCGGCAGGTGCAGCCGGAACCCCTGCCGATTCCTCCACACCGACGCGCCTGATCCGGCGCCGCCGATCGCCGCCGTCAACACGCGCAGCAACACGTGGGTCAACCCGTCCTGCGTCGCCGCGAATTCGGATGGCAAGGGTAGGGCTCCTCCGGTTCAGCCGGCGAAGCGGCAGGTTGAGGCGCCGCCGGAAACGCCTGCCAAGCGCCGATGCGGCGGCGGCGCGTGGTGCGTCGGCGACGGCTTCTGCGGCGTCGCGCGGCTCAAGGGTCACGCCAAGGCGGTCACCGGCTTCGCGCTGCCGGAAGGGTCGGACAAGCTGTTCTCCGGCAGCCTGGACAGCACGGTGCGCGCCTGGGACTGCAGCACCGGGCAGTGCGTCCGCGTCGAGGAGATGCAAGAAGGGGAGGTGCACAAGCTGATCGCCATGGGCCCGTGGGTCCTCGCCGGCGTGCGCGGCGCCGTCAAGGCGATCCACACGGGGACCGGCAAGGAGCTCCGGCTGCGAGGGCCCGCGTCGCAGATCACCGCCATGCTAGCCGAGGACGAGGACCACCTCTTCGCCGGCGCGGAGGACGGTGCCGTGTTCATGTGGAGGATGAACCAAGAACAGCAATCGTTCGACGAGGTCGCCGCGCTCACCGGCCACTACAAGGCCGTCGTGTCGCTCGCGCAGGGCAAGGGCGCGCTCTACTCCGGCTCAACAGACGGCAGCATCAGGGTCTGGGACCTCGACACCCACCGCTGCATCTACAGCTTCGCCGGCCACTCGTCGACGGTCACCGCATTGCTCTGCTGGGAGCGGTTCTTGCTCTCCTCGTCCGACGATGGCACCGTGAAGGTCTGGCAGTGGAAGCCTGATCACGACGACCTCGACCTCGAGGTGCACTACACCCACAAGGAAGACGAACGGGTCGTTTCCATGGACGGAACGTACGACGCCGACGAGAAGCCCGTGCTGCTTGTCTCCCGCGGCGATGGCGTTGTCCGTGTCTACGATCTCCCGTCGCTGAAGAAGAGAGGGGATATTATCTGCGACGACGAGGTCAGGACGATATCCGTCAGGTCGCGCGGCGTCGTCTTCACCGGAGATGCGTCCGGCGAGGTCAGAGTGGTGAAGTGGACATCACTGAGTGATGCAGCAGAGTCTTATTTAGCTATGGCCTGAATTAGTTTTGATTTAAGAGAACCATCAGCCAATTTTTGCTTTGTGGTCTTGTGATTCAGTACTCCGATGTATGTAGTGTACACAACGTTGTAAACA GTGGAACCGCTACGCG                                                                                                                                   ]
[+] EMBL BI796380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCTTTGTGGTCTTGTGATTCAGTACTCCGATGTATGTAGTGTACACAACGTTGTAAACACGTGGAACCGCTACGCGGCTTGTGAATACTACTCCCTCCGTTTTGTAACGGTGTGAGGCTCAAGGTTAAATCTGAATGAATTTTTAGTTCAGATCTGCCTGTTTGTAATTATTAATGTTTTGATTTAAGAGAACCATCAGGGAGTTTT]


>consensus_2784#0 CCACGACGATGGCGGCGGTGCAGCTCCTTCCCCTTCCTCCCGCCGCCCCTCCTCAGCCGC GCCGCGGCAAACCTGGTTGCTGGAACACGCCGCCAGCGCCGCCGAAGGTTTGCCACTACT GGAAGTCCGGCAGGTGCAGCCGGAACCCCTGCCGATTCCTCCACACCGACGCGCCTGATC CGGCGCCGCCGATCGCCGCCGTCAACACGCGCAGCAACACGTGGGTCAACCCGTCCTGCG TCGCCGCGAATTCGGATGGCAAGGGTAGGGCTCCTCCGGTTCAGCCGGCGAAGCGGCAGG TTGAGGCGCCGCCGGAAACGCCTGCCAAGCGCCGATGCGGCGGCGGCGCGTGGTGCGTCG GCGACGGCTTCTGCGGCGTCGCGCGGCTCAAGGGTCACGCCAAGGCGGTCACCGGCTTCG CGCTGCCGGAAGGGTCGGACAAGCTGTTCTCCGGCAGCCTGGACAGCACGGTGCGCGCCT GGGACTGCAGCACCGGGCAGTGCGTCCGCGTCGAGGAGATGCAAGAAGGGGAGGTGCACA AGCTGATCGCCATGGGCCCGTGGGTCCTCGCCGGCGTGCGCGGCGCCGTCAAGGCGATCC ACACGGGGACCGGCAAGGAGCTCCGGCTGCGAGGGCCCGCGTCGCAGATCACCGCCATGC TAGCCGAGGACGAGGACCACCTCTTCGCCGGCGCGGAGGACGGTGCCGTGTTCATGTGGA GGATGAACCAAGAACAGCAATCGTTCGACGAGGTCGCCGCGCTCACCGGCCACTACAAGG CCGTCGTGTCGCTCGCGCAGGGCAAGGGCGCGCTCTACTCCGGCTCAACAGACGGCAGCA TCAGGGTCTGGGACCTCGACACCCACCGCTGCATCTACAGCTTCGCCGGCCACTCGTCGA CGGTCACCGCATTGCTCTGCTGGGAGCGGTTCTTGCTCTCCTCGTCCGACGATGGCACCG TGAAGGTCTGGCAGTGGAAGCCTGATCACGACGACCTCGACCTCGAGGTGCACTACACCC ACAAGGAAGACGAACGGGTCGTTTCCATGGACGGAACGTACGACGCCGACGAGAAGCCCG TGCTGCTTGTCTCCCGCGGCGATGGCGTTGTCCGTGTCTACGATCTCCCGTCGCTGAAGA AGAGAGGGGATATTATCTGCGACGACGAGGTCAGGACGATATCCGTCAGGTCGCGCGGCG TCGTCTTCACCGGAGATGCGTCCGGCGAGGTCAGAGTGGTGAAGTGGACATCACTGAGTG ATGCAGCAGAGTCTTATTTAGCTATGGCCTGAATTAGTTTTGATTTAAGAGAACCATCAG CCAATTTTTGCTTTGTGGTCTTGTGATTCAGTACTCCGATGTATGTAGTGTACACAACGT TGTAAACAGTGGAACCGCTACGCGGCTTGTGAATACTACTCCCTCCGTTTTGTAACGGTG TGAGGCTCAAGGTTAAATCTGAATGAATTTTTAGTTCAGATCTGCCTGTTTGTAATTATT AATGTTTTGATTTAAGAGAACCATCAGGGAGTTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)