These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 132 fasta sequence [CCAGCACATCTCCAGTCACTCCCATTTGCACACAGTCCAGAGCACATCGTCACCACCATGGGACCACACCCACACCACTGCTGCACTGCCTTCTGCACCACTGCACAGCAGCAGCAGCACACATCATTATTG] [+] EMBL CB965209 [CCAGCACATCTCCAGTCACTCCCATTTGCACACAGTCCAGAGCACATCGTCACCACCATGGGACCACACCCACACCACTGCTGCACTGCCTTCTGCACCACTGCACAGCAGCAGCAGCACACATCATTATTG] consensusID : consensus_2812#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 90 fasta sequence [CATATGCACACATCCAGCACAATCGTCACCACCAGTGGGCCACACCCAACCACTGCTGCACTGCCCTCTGCACCACTGCACAGCAGCAGC] [+] EMBL CB965939 [CATATGCACACATCCAGCACAATCGTCACCACCAGTGGGCCACACCCAACCACTGCTGCACTGCCCTCTGCACCACTGCACAGCAGCAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2812#0 CCAGCACATCTCCAGTCACTCCCATTTGCACACAGTCCAGAGCACATCGTCACCACCATG 60 consensus_2812#1 ----------------------CATATGCACACA-TCCAGCACA-ATCGTCACCACCAGT 36 *** ******** ***** ** ************* consensus_2812#0 GGACCACACCCACACCACTGCTGCACTGCCTTCTGCACCACTGCACAGCAGCAGCAGCAC 120 consensus_2812#1 GGGCCACACCCA-ACCACTGCTGCACTGCCCTCTGCACCACTGCACAGCAGCAGC----- 90 ** ********* ***************** ************************ consensus_2812#0 ACATCATTATTG 132 consensus_2812#1 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||