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Oryza sativa
cluster # 2835 cluster # 2835       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2835#0 length = 2578 sequences # 1  
 consensus_2835#1 length = 1663 sequences # 1  
consensusID : consensus_2835#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2578
fasta sequence 
                              [AGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAATAACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATCAGAAGTAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGTTTAGAAATGCTTTGTGGACCTGATGGTGAGCTTCCTGAGAAGCTGAGAAATCTGGAACCTCGCCTAATTGAGCATGTCAGTAATGAAATAATGGATAAAGATCCTAATGTCCGCTGGGATGACATAGCTGGTTTGGAACATGCAAAGAAGTGCGTGACGGAAATGGTGATATGGCCACTGCTACGTCCAGACATCTTTCACGGTTGTCGGTCTCCTGGAAGAGGTCTTCTATTGTTTGGACCTCCTGTGGGTATTTATCTCATCTGGTTATGTTGCTCTTCCCCCATTTTATTCAATTTAAAGATAAGTGCATTAATTTCCACAGGGAACAGGCAAAACCATGATTGGAAAAGCAATAGCTGGTGAAGCCAAGGCAACATTTTTCTACATTTCTGCAAGTTCACTGACAAGCAAATGGGTCTGTCTGCTGCTTGTTTTAATTTTCAACATAGTTCCATTTGTATCCTATAAAGTCAAGGCTAGTTACATCTTTCTGGTCTGCATATCTTTAATCAATCATAAAGGTGCTACGGAAAACAAATTCATTTGTTTATATGCTAATAAATCCATCTTATTAATGTTTTCAAAGAATTATAGTCTATATGGATTAGAACCAAGATTTAGTACAAGCGTGGAACATGCTTGTACTCCCTACAATTGTTTGTGATCTCTCTCACTTGCTAATTCTCTCATCCCAGCCTTTATATGCCCTCTCCTCAGAAAGTAGAAATCCTAATCTCTGTCAAACTATGTTTGCCCATTTTGTGCACAGTAATTATGCAATCTTTTTTTTTCAAAAAAAAATACATTATGACATAGAATGTGAAGGCATACCTTTAGATTGATAATGATTGTTAATTCTCCTGCTGTGCAGATTGGCGAGGGTGAAAAGCTAGTTCGAGCACTATTTGGGGTGGCCTGTTGTCGTCAGCCAGCTGTCATATTTGTGGATGAGATTGATTCACTACTATCACAGCGCAAATCAGATGGTGAACATGAGTCAAGTAGGAGGTTGAAAACACAGTTTCTAATCGAGATGGAAGGTTTTGACAGTGGAAATGATCAAATTTTACTTATAGGTACCTCATGCGTTAAAAAGATGAAAATATCAAGTGTGATATGCATTAATGTATGTCATGGTAGGAATTACAGGATATTTATATGTATGAGGTTTGAGCATCAACATAGTATGTGCTTTTCTATTGTCCTTGTGAAATGCATTATTGCATATCCATCTTTGCCTAAAGGCCTATGCTTTGAAGTTGTGTTGCATAGTCTATGAGGTGGATGTTAAATGTGGGGTCATAACCAATGGTGGAACTTAGATTGGGCTGATGTCATGGAGAAAAAATGATGGCAGGAGCAACAAACAGACCTCAAGAACTGGATGAAGCAGCACGGAGGCGACTTACAAAACGTCTATATATTCCCCTTCCTTCATCAGAGGCACGGGCCTGGATAATTCGCAATCTATTGGAGAAGGATGGCCTTTTCAAGCTCACAGAGGAAGAAACAAATATTGTTTGCAAGTTAACAGAAGGTTACTCAGGATCTGACATGAAAAATCTTGTGAAAGATGCCTCAATGGGACCACTAAGGGAAGCTCTTCAACAGGGTGTTGGCATAACAAAGCTAAACAAGGAGGACATGCGGCCGGTGATGCTCAAGGATTTTGAGACTGCTTTGCAGGAGGTTAGACCTTCTGTTTCCTCAAGTGAACTGGGAACTTATGAAGAATGGAACAGGCAATTTGGGAGCTTAGCAAATTAATTTGCAGGGAGATGTTGAAACCTTGAAGGCGCTAGTATGCTTTCCCATGCAAAGCATGCGAAACATATGCTTGCGAGAGTCGACAGAGGACAATGAAGCATACCTTGTGCAGCCATATACCTTCAGACTACTTGTGATCACTGATGCAGGTATTCCTTGCCTCTCAGCTGAAAGACTTCCAAAGGCGCTGCAAATCTGATGGTTTGGATGCGTGTTATTTTTGCTCAATGTCAAGTATGCTGGCAGTTGGTGATGCTGTATGAGTTGGTCTTGTGGTGCTTCAAAAGAAGCTACTTCGAGGAGTCGCAGGAATTTTCATTCTTTGCAAAGCAAGCTACCAATGTTCAGTAAAGCGGTGTTTATCTGTATGCATTCAGCTATTTTGTTACTATGGTGCTGAATGCATAATGCATATCCTAAATTCCTAATTATGATGTTATGTTTTTTTTTTTTTTTTGCTTTCTTGTGGTTTGTTTAATTCTGTCACAGATTCGATGAAACTGCCCTATGC]

[+] EMBL AK102599             [AGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAATAACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATCAGAAGTAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGTTTAGAAATGCTTTGTGGACCTGATGGTGAGCTTCCTGAGAAGCTGAGAAATCTGGAACCTCGCCTAATTGAGCATGTCAGTAATGAAATAATGGATAAAGATCCTAATGTCCGCTGGGATGACATAGCTGGTTTGGAACATGCAAAGAAGTGCGTGACGGAAATGGTGATATGGCCACTGCTACGTCCAGACATCTTTCACGGTTGTCGGTCTCCTGGAAGAGGTCTTCTATTGTTTGGACCTCCTGTGGGTATTTATCTCATCTGGTTATGTTGCTCTTCCCCCATTTTATTCAATTTAAAGATAAGTGCATTAATTTCCACAGGGAACAGGCAAAACCATGATTGGAAAAGCAATAGCTGGTGAAGCCAAGGCAACATTTTTCTACATTTCTGCAAGTTCACTGACAAGCAAATGGGTCTGTCTGCTGCTTGTTTTAATTTTCAACATAGTTCCATTTGTATCCTATAAAGTCAAGGCTAGTTACATCTTTCTGGTCTGCATATCTTTAATCAATCATAAAGGTGCTACGGAAAACAAATTCATTTGTTTATATGCTAATAAATCCATCTTATTAATGTTTTCAAAGAATTATAGTCTATATGGATTAGAACCAAGATTTAGTACAAGCGTGGAACATGCTTGTACTCCCTACAATTGTTTGTGATCTCTCTCACTTGCTAATTCTCTCATCCCAGCCTTTATATGCCCTCTCCTCAGAAAGTAGAAATCCTAATCTCTGTCAAACTATGTTTGCCCATTTTGTGCACAGTAATTATGCAATCTTTTTTTTTCAAAAAAAAATACATTATGACATAGAATGTGAAGGCATACCTTTAGATTGATAATGATTGTTAATTCTCCTGCTGTGCAGATTGGCGAGGGTGAAAAGCTAGTTCGAGCACTATTTGGGGTGGCCTGTTGTCGTCAGCCAGCTGTCATATTTGTGGATGAGATTGATTCACTACTATCACAGCGCAAATCAGATGGTGAACATGAGTCAAGTAGGAGGTTGAAAACACAGTTTCTAATCGAGATGGAAGGTTTTGACAGTGGAAATGATCAAATTTTACTTATAGGTACCTCATGCGTTAAAAAGATGAAAATATCAAGTGTGATATGCATTAATGTATGTCATGGTAGGAATTACAGGATATTTATATGTATGAGGTTTGAGCATCAACATAGTATGTGCTTTTCTATTGTCCTTGTGAAATGCATTATTGCATATCCATCTTTGCCTAAAGGCCTATGCTTTGAAGTTGTGTTGCATAGTCTATGAGGTGGATGTTAAATGTGGGGTCATAACCAATGGTGGAACTTAGATTGGGCTGATGTCATGGAGAAAAAATGATGGCAGGAGCAACAAACAGACCTCAAGAACTGGATGAAGCAGCACGGAGGCGACTTACAAAACGTCTATATATTCCCCTTCCTTCATCAGAGGCACGGGCCTGGATAATTCGCAATCTATTGGAGAAGGATGGCCTTTTCAAGCTCACAGAGGAAGAAACAAATATTGTTTGCAAGTTAACAGAAGGTTACTCAGGATCTGACATGAAAAATCTTGTGAAAGATGCCTCAATGGGACCACTAAGGGAAGCTCTTCAACAGGGTGTTGGCATAACAAAGCTAAACAAGGAGGACATGCGGCCGGTGATGCTCAAGGATTTTGAGACTGCTTTGCAGGAGGTTAGACCTTCTGTTTCCTCAAGTGAACTGGGAACTTATGAAGAATGGAACAGGCAATTTGGGAGCTTAGCAAATTAATTTGCAGGGAGATGTTGAAACCTTGAAGGCGCTAGTATGCTTTCCCATGCAAAGCATGCGAAACATATGCTTGCGAGAGTCGACAGAGGACAATGAAGCATACCTTGTGCAGCCATATACCTTCAGACTACTTGTGATCACTGATGCAGGTATTCCTTGCCTCTCAGCTGAAAGACTTCCAAAGGCGCTGCAAATCTGATGGTTTGGATGCGTGTTATTTTTGCTCAATGTCAAGTATGCTGGCAGTTGGTGATGCTGTATGAGTTGGTCTTGTGGTGCTTCAAAAGAAGCTACTTCGAGGAGTCGCAGGAATTTTCATTCTTTGCAAAGCAAGCTACCAATGTTCAGTAAAGCGGTGTTTATCTGTATGCATTCAGCTATTTTGTTACTATGGTGCTGAATGCATAATGCATATCCTAAATTCCTAATTATGATGTTATGTTTTTTTTTTTTTTTTGCTTTCTTGTGGTTTGTTTAATTCTGTCACAGATTCGATGAAACTGCCCTATGC]




>consensus_2835#0
AGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAG
ATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAA
TGTGATAACAACCCAAATAACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGT
GGATTACGTGGTAATTTTGTTCCTCCTATCAGAAGTAATGGAGGATCCACTTCCAATATG
ACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGTTTA
GAAATGCTTTGTGGACCTGATGGTGAGCTTCCTGAGAAGCTGAGAAATCTGGAACCTCGC
CTAATTGAGCATGTCAGTAATGAAATAATGGATAAAGATCCTAATGTCCGCTGGGATGAC
ATAGCTGGTTTGGAACATGCAAAGAAGTGCGTGACGGAAATGGTGATATGGCCACTGCTA
CGTCCAGACATCTTTCACGGTTGTCGGTCTCCTGGAAGAGGTCTTCTATTGTTTGGACCT
CCTGTGGGTATTTATCTCATCTGGTTATGTTGCTCTTCCCCCATTTTATTCAATTTAAAG
ATAAGTGCATTAATTTCCACAGGGAACAGGCAAAACCATGATTGGAAAAGCAATAGCTGG
TGAAGCCAAGGCAACATTTTTCTACATTTCTGCAAGTTCACTGACAAGCAAATGGGTCTG
TCTGCTGCTTGTTTTAATTTTCAACATAGTTCCATTTGTATCCTATAAAGTCAAGGCTAG
TTACATCTTTCTGGTCTGCATATCTTTAATCAATCATAAAGGTGCTACGGAAAACAAATT
CATTTGTTTATATGCTAATAAATCCATCTTATTAATGTTTTCAAAGAATTATAGTCTATA
TGGATTAGAACCAAGATTTAGTACAAGCGTGGAACATGCTTGTACTCCCTACAATTGTTT
GTGATCTCTCTCACTTGCTAATTCTCTCATCCCAGCCTTTATATGCCCTCTCCTCAGAAA
GTAGAAATCCTAATCTCTGTCAAACTATGTTTGCCCATTTTGTGCACAGTAATTATGCAA
TCTTTTTTTTTCAAAAAAAAATACATTATGACATAGAATGTGAAGGCATACCTTTAGATT
GATAATGATTGTTAATTCTCCTGCTGTGCAGATTGGCGAGGGTGAAAAGCTAGTTCGAGC
ACTATTTGGGGTGGCCTGTTGTCGTCAGCCAGCTGTCATATTTGTGGATGAGATTGATTC
ACTACTATCACAGCGCAAATCAGATGGTGAACATGAGTCAAGTAGGAGGTTGAAAACACA
GTTTCTAATCGAGATGGAAGGTTTTGACAGTGGAAATGATCAAATTTTACTTATAGGTAC
CTCATGCGTTAAAAAGATGAAAATATCAAGTGTGATATGCATTAATGTATGTCATGGTAG
GAATTACAGGATATTTATATGTATGAGGTTTGAGCATCAACATAGTATGTGCTTTTCTAT
TGTCCTTGTGAAATGCATTATTGCATATCCATCTTTGCCTAAAGGCCTATGCTTTGAAGT
TGTGTTGCATAGTCTATGAGGTGGATGTTAAATGTGGGGTCATAACCAATGGTGGAACTT
AGATTGGGCTGATGTCATGGAGAAAAAATGATGGCAGGAGCAACAAACAGACCTCAAGAA
CTGGATGAAGCAGCACGGAGGCGACTTACAAAACGTCTATATATTCCCCTTCCTTCATCA
GAGGCACGGGCCTGGATAATTCGCAATCTATTGGAGAAGGATGGCCTTTTCAAGCTCACA
GAGGAAGAAACAAATATTGTTTGCAAGTTAACAGAAGGTTACTCAGGATCTGACATGAAA
AATCTTGTGAAAGATGCCTCAATGGGACCACTAAGGGAAGCTCTTCAACAGGGTGTTGGC
ATAACAAAGCTAAACAAGGAGGACATGCGGCCGGTGATGCTCAAGGATTTTGAGACTGCT
TTGCAGGAGGTTAGACCTTCTGTTTCCTCAAGTGAACTGGGAACTTATGAAGAATGGAAC
AGGCAATTTGGGAGCTTAGCAAATTAATTTGCAGGGAGATGTTGAAACCTTGAAGGCGCT
AGTATGCTTTCCCATGCAAAGCATGCGAAACATATGCTTGCGAGAGTCGACAGAGGACAA
TGAAGCATACCTTGTGCAGCCATATACCTTCAGACTACTTGTGATCACTGATGCAGGTAT
TCCTTGCCTCTCAGCTGAAAGACTTCCAAAGGCGCTGCAAATCTGATGGTTTGGATGCGT
GTTATTTTTGCTCAATGTCAAGTATGCTGGCAGTTGGTGATGCTGTATGAGTTGGTCTTG
TGGTGCTTCAAAAGAAGCTACTTCGAGGAGTCGCAGGAATTTTCATTCTTTGCAAAGCAA
GCTACCAATGTTCAGTAAAGCGGTGTTTATCTGTATGCATTCAGCTATTTTGTTACTATG
GTGCTGAATGCATAATGCATATCCTAAATTCCTAATTATGATGTTATGTTTTTTTTTTTT
TTTTGCTTTCTTGTGGTTTGTTTAATTCTGTCACAGATTCGATGAAACTGCCCTATGC

consensusID : consensus_2835#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1663
fasta sequence 
                              [GCGCGGCGAAAGGAAAAAAAAAGAAAACAAAAAAGAAAAACACGCGAAATGGCGGAGCAGTCTCACGCCGGCGACGGCGGCGGCGGCGGCGCGGGCTCCGGGGAGCCGACGAACTGGAGGAAGGAGGCGGACGATAGGCTGCGGCGGCTCCACTCCCTCCAGTTCGGCGCGGACGTCGCGCTGAAGGGCAAGGACCCCGCGGGGGCGCAGGTGCTCGCGCTCCGCCTCCTCGGCTTCCTCGACTCGCAGGCCCTCCCCGGCGACGGCGGCGCGGCGGGCCACGAGGCCAGCTTCGTCGCGCCCATCCGCGCCGCGGCGTCATCCAGCGTCGCCGCCGCCATCCGCGCCCGCGCCGGGAGGTCAGACAGTGCTGTGTTTAAGCTTGCAGAAAAGGAAGTTGGTTGTGTTTTTGCAAAGACAGGAGAAGTTAATATTGAAAAGATCAAGTGTTCAAAGTATTTTCAAGCACTTCTTCAGAAATCCAAAGGACATGCTGCTGAACAAATGAAGACCACTGATTGCCAAGAGTCCACCATTGAAGAAGGTCCGCATGTAGAGGAAAACTCAACTGATATGGAAAATGAGAAGCTTAGCATCAGGGCTTCAAAATTAGTAATGCAAAGAAAACTAACATCACTGCGTAGCCATAAGCCCCTGAAGGCAAATGTTGTACAAGATGGGAATATGTTCAAATCAGTGAGTAACATATCTAATGAGAGTGTTGCTGTCGAAAATGGAGTCAGAACAAATCATACTGATAACAAGTATACTGCTTATATGGATCTTGAAGATGATGACAGACCCCGTGGACTGTTGCAGAATGCAAAGCGAAAGCATGCAGGATTCAGAAGCCCAATCTGCGAACATGCAAATTCTCCATTAAGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAATAACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATCAGAAATAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGGTCTGTATTTCCATCTTGATCATATGATACCATTTGAATTTACTTTTATCTTCATGTTATTGTAACAATTTACATGACATTTACATAGCTATTTATCTCGTTGCTTTTCTTATGTTTAGCATGACTACATCTTTTCCTTTTTTTTCTAAGACTCAGATTTATTGGTACTAGAAGCAAAGTACATGAGATACATTTCTTTGACTTCATTGCCATAATGTGTTTTTTGTTTTGCAATTGAGATGACTAAGATTATCACTATCATATTCAGTATGATTGCCTTTCTTACATCTGTTTGGTGATTTGGACACTGGTTTGCATTTTTTGCTGGGTATCCTTGTTGTAGACGTTGCTTTAAAGTCAATGTAGTGTGTTAAAGAACTAGGTAAATTTCTGGATGGCAATATTACCTGTTACTTAACAATTTCAGAACAAGAGTATGAATTGATCAAGTGGATATAGCAGCATTAGTATGATAATAGATATTT]

[+] EMBL AK106497             [GCGCGGCGAAAGGAAAAAAAAAGAAAACAAAAAAGAAAAACACGCGAAATGGCGGAGCAGTCTCACGCCGGCGACGGCGGCGGCGGCGGCGCGGGCTCCGGGGAGCCGACGAACTGGAGGAAGGAGGCGGACGATAGGCTGCGGCGGCTCCACTCCCTCCAGTTCGGCGCGGACGTCGCGCTGAAGGGCAAGGACCCCGCGGGGGCGCAGGTGCTCGCGCTCCGCCTCCTCGGCTTCCTCGACTCGCAGGCCCTCCCCGGCGACGGCGGCGCGGCGGGCCACGAGGCCAGCTTCGTCGCGCCCATCCGCGCCGCGGCGTCATCCAGCGTCGCCGCCGCCATCCGCGCCCGCGCCGGGAGGTCAGACAGTGCTGTGTTTAAGCTTGCAGAAAAGGAAGTTGGTTGTGTTTTTGCAAAGACAGGAGAAGTTAATATTGAAAAGATCAAGTGTTCAAAGTATTTTCAAGCACTTCTTCAGAAATCCAAAGGACATGCTGCTGAACAAATGAAGACCACTGATTGCCAAGAGTCCACCATTGAAGAAGGTCCGCATGTAGAGGAAAACTCAACTGATATGGAAAATGAGAAGCTTAGCATCAGGGCTTCAAAATTAGTAATGCAAAGAAAACTAACATCACTGCGTAGCCATAAGCCCCTGAAGGCAAATGTTGTACAAGATGGGAATATGTTCAAATCAGTGAGTAACATATCTAATGAGAGTGTTGCTGTCGAAAATGGAGTCAGAACAAATCATACTGATAACAAGTATACTGCTTATATGGATCTTGAAGATGATGACAGACCCCGTGGACTGTTGCAGAATGCAAAGCGAAAGCATGCAGGATTCAGAAGCCCAATCTGCGAACATGCAAATTCTCCATTAAGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAATAACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATCAGAAATAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGGTCTGTATTTCCATCTTGATCATATGATACCATTTGAATTTACTTTTATCTTCATGTTATTGTAACAATTTACATGACATTTACATAGCTATTTATCTCGTTGCTTTTCTTATGTTTAGCATGACTACATCTTTTCCTTTTTTTTCTAAGACTCAGATTTATTGGTACTAGAAGCAAAGTACATGAGATACATTTCTTTGACTTCATTGCCATAATGTGTTTTTTGTTTTGCAATTGAGATGACTAAGATTATCACTATCATATTCAGTATGATTGCCTTTCTTACATCTGTTTGGTGATTTGGACACTGGTTTGCATTTTTTGCTGGGTATCCTTGTTGTAGACGTTGCTTTAAAGTCAATGTAGTGTGTTAAAGAACTAGGTAAATTTCTGGATGGCAATATTACCTGTTACTTAACAATTTCAGAACAAGAGTATGAATTGATCAAGTGGATATAGCAGCATTAGTATGATAATAGATATTT]




>consensus_2835#1
GCGCGGCGAAAGGAAAAAAAAAGAAAACAAAAAAGAAAAACACGCGAAATGGCGGAGCAG
TCTCACGCCGGCGACGGCGGCGGCGGCGGCGCGGGCTCCGGGGAGCCGACGAACTGGAGG
AAGGAGGCGGACGATAGGCTGCGGCGGCTCCACTCCCTCCAGTTCGGCGCGGACGTCGCG
CTGAAGGGCAAGGACCCCGCGGGGGCGCAGGTGCTCGCGCTCCGCCTCCTCGGCTTCCTC
GACTCGCAGGCCCTCCCCGGCGACGGCGGCGCGGCGGGCCACGAGGCCAGCTTCGTCGCG
CCCATCCGCGCCGCGGCGTCATCCAGCGTCGCCGCCGCCATCCGCGCCCGCGCCGGGAGG
TCAGACAGTGCTGTGTTTAAGCTTGCAGAAAAGGAAGTTGGTTGTGTTTTTGCAAAGACA
GGAGAAGTTAATATTGAAAAGATCAAGTGTTCAAAGTATTTTCAAGCACTTCTTCAGAAA
TCCAAAGGACATGCTGCTGAACAAATGAAGACCACTGATTGCCAAGAGTCCACCATTGAA
GAAGGTCCGCATGTAGAGGAAAACTCAACTGATATGGAAAATGAGAAGCTTAGCATCAGG
GCTTCAAAATTAGTAATGCAAAGAAAACTAACATCACTGCGTAGCCATAAGCCCCTGAAG
GCAAATGTTGTACAAGATGGGAATATGTTCAAATCAGTGAGTAACATATCTAATGAGAGT
GTTGCTGTCGAAAATGGAGTCAGAACAAATCATACTGATAACAAGTATACTGCTTATATG
GATCTTGAAGATGATGACAGACCCCGTGGACTGTTGCAGAATGCAAAGCGAAAGCATGCA
GGATTCAGAAGCCCAATCTGCGAACATGCAAATTCTCCATTAAGTAATGATGAAGCCGAT
GCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAGATGGATTCTGTGCAAAAG
TATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAATGTGATAACAACCCAAAT
AACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGTGGATTACGTGGTAATTTT
GTTCCTCCTATCAGAAATAATGGAGGATCCACTTCCAATATGACCTCACGGGTCATTGGA
AAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGGTCTGTATTTCCATCTTGATCA
TATGATACCATTTGAATTTACTTTTATCTTCATGTTATTGTAACAATTTACATGACATTT
ACATAGCTATTTATCTCGTTGCTTTTCTTATGTTTAGCATGACTACATCTTTTCCTTTTT
TTTCTAAGACTCAGATTTATTGGTACTAGAAGCAAAGTACATGAGATACATTTCTTTGAC
TTCATTGCCATAATGTGTTTTTTGTTTTGCAATTGAGATGACTAAGATTATCACTATCAT
ATTCAGTATGATTGCCTTTCTTACATCTGTTTGGTGATTTGGACACTGGTTTGCATTTTT
TGCTGGGTATCCTTGTTGTAGACGTTGCTTTAAAGTCAATGTAGTGTGTTAAAGAACTAG
GTAAATTTCTGGATGGCAATATTACCTGTTACTTAACAATTTCAGAACAAGAGTATGAAT
TGATCAAGTGGATATAGCAGCATTAGTATGATAATAGATATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2835#0      AGTAATGATGAAGCCGATGCCCCTGCCAATGAGTTTGTGACTGCCAGGACAAAGTTGGAG 60
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      ATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATCCCCACAA 120
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      TGTGATAACAACCCAAATAACCGGAATTATGGTGTAAGGCCAACCTGGAATTCTCGTCGT 180
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      GGATTACGTGGTAATTTTGTTCCTCCTATCAGAAGTAATGGAGGATCCACTTCCAATATG 240
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      ACCTCACGGGTCATTGGAAAAAATGATGATTCAATGGGAGATTCAACAAGAAAATGTTTA 300
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      GAAATGCTTTGTGGACCTGATGGTGAGCTTCCTGAGAAGCTGAGAAATCTGGAACCTCGC 360
consensus_2835#1      -----------------------------GCGCGGCGAAAGGAAAAAAAAAGAAAACAAA 31
                                                    *  *   *   ** ***    ***      

consensus_2835#0      CTAATTGAGCATGTCAGTAATGAAATAATGGATAAAGATCCTAATGTCCGCTGGGATGAC 420
consensus_2835#1      AAAGAAAAACACGC--GAAATGGCGGAGCAGTCTC--ACGCCGGCGACGGCGGCGGCGGC 87
                        *    * ** *   * ****    *   *      *  *    * * ** * *  * *

consensus_2835#0      ATAGCTGGTTTGGAACATGCAAAGAAGTGCGTGACGGAAATGG-TGATATGGCCACTGCT 479
consensus_2835#1      GGCGCGGGCTCCGGGGAGCCGACGAACTGGAGGAAGGAGGCGGACGATAGG----CTGCG 143
                         ** ** *  *   *  * * *** **   ** ***   **  **** *    **** 

consensus_2835#0      ACGTCCAGACATCTTTCACGGTTGTCGGTCTCCTGGAAGAGGTCTTCTATTGTTTGGACC 539
consensus_2835#1      GCGGCTCCACTCCCTCCA-GTTCGGCG------CGGACGTCGCGCTGAAGGGCAAGGACC 196
                       ** *   **  * * ** * * * **       *** *  *   *  *  *   *****

consensus_2835#0      TCCTGTGGGTATTTATCTCATCTGGTTATGTTGCTCTTCCCCCATTTTATTCAATTTAAA 599
consensus_2835#1      CCGCGGGGGCG-------CAGGTGCTCGCGCTCCGCCTCCTCGGCTTCCTCGACTCGCAG 249
                       *  * ***         **  ** *   * * * * *** *   **  *  * *   * 

consensus_2835#0      GATAAGTGCATTAATTTCCACAGGGAACAGGCAAAACCATGATTGGAAAAGCAATAGCTG 659
consensus_2835#1      GCCCTCCCCGGCGACGGCGGCGCGG--CGGGCCA---CGAGGCCAGCTTCGTCGCGCCCA 304
                      *       *    *   *  *  **  * *** *   *  *    *    *      *  

consensus_2835#0      GTGAAGCCAAGGCAACATTTTTCTACATTTCTGCAAGTTCACTGACAAGCAAATGGGTCT 719
consensus_2835#1      TCCGCGCCGCGGCGTCATCCAGCGTCGCCGCCGCCA-TCCGCGCCCGCGCCGGGAGGTCA 363
                           ***  ***  ***    *  *    * ** * * * *   *  **     **** 

consensus_2835#0      GTCTGCTGCTTGTTTTAATTTTCAACATAGTT--CCATTTGTATCCT-ATAAAGTCAAGG 776
consensus_2835#1      GACAGTGCTGTGTTTAAGCTTGCAGAAAAGGAAGTTGGTTGTGTTTTTGCAAAGACAGGA 423
                      * * *     ***** *  ** **  * **        **** *  *   **** ** * 

consensus_2835#0      CTAGTTACATCTTTCTGGTCTGCATATCTTTAATCAATCATAAAGGTGCTACGGAAAACA 836
consensus_2835#1      GAAGTTAATATTGAAAAGATCAAGTGTTCAAAGTATTTTCAAGCACTTCTTCAGAAATCC 483
                        *****    *     *      * *    * *   *   *    * ** * **** * 

consensus_2835#0      AATTCATTTGTTTATATGCTAATAAATCCATCTTATTAATGTTTTCAAAGAATTATAGTC 896
consensus_2835#1      AAAGGACATGCTGCTGAACAAATGAAGACCACTGATTGCCAAGAGTCCACCATTGAAGAA 543
                      **   *  ** *  *   * *** **  *  ** ***           *  ***  **  

consensus_2835#0      TATATGGATTAGAACCAAGATTTAGTACAAGCGTGGAACATGCTTGTACTCCCTACAATT 956
consensus_2835#1      GGTCCGCATGTAGAGGAAAACTCA--ACTGATATGGAAAATGAGAAGCTTAGCATCAGGG 601
                        *  * **    *  ** * * *  **     ***** ***       *  *  **   

consensus_2835#0      GTTTGTGATCTCTCTCACTTGCTAATTCTCTCATCCCAGCCTTTATATGCCCTCTCCTCA 1016
consensus_2835#1      CTTCAAAATTAGTAATGCA-AAGAAAACTAACATCACTGCGTAGCCATAAG----CCCCT 656
                       **    **   *    *     **  **  **** * ** *    **       ** * 

consensus_2835#0      GAAAGTAGAAATCCTAATCTCTGTCAAACTATGTTTGCCCATTTTGTGCACAGTAATTAT 1076
consensus_2835#1      GAAGGCAAATGTTGTA--CAAGATGGGAATATGTTCAAAT-CAGTGAGTAACATATCTAA 713
                      *** * * *  *  **  *    *   * ******         ** * *   **  ** 

consensus_2835#0      GCAATCTTTTTTTTTCAAAAAAAAATACATTATGACATAGAATGTGAA--GGCATACC-T 1133
consensus_2835#1      TGAGAGTGTTGCTGTCGAAAATGGAGTCAGAACAAATCATACTGATAACAAGTATACTGC 773
                        *   * **  * ** ****   *  **  *  *   * * **  **   * ****   

consensus_2835#0      TTAGATTGATAATGATTGTTAATTCTCCTGCTGTGCAGATTGGCG-AGGGTGAAAAGCTA 1192
consensus_2835#1      TTATATGGATCTTGAAGATGA--TGACAGACCCCGTGGACTGTTGCAGAATGCAAAGCGA 831
                      *** ** ***  ***   * *  *  *   *   *  ** **  * **  ** ***** *

consensus_2835#0      GTTCGAGCACTATTTGGGGTGGCCTGTTGTCGTCAGCCAGCTGTCATATTTGTGGATGAG 1252
consensus_2835#1      AAGCATGCAGGATTCAGAA--GCCCA-----ATCTGCGAACATGCAAATTCTCCATTAAG 884
                         *  ***  ***  *    ***        ** ** * *   ** ***      * **

consensus_2835#0      -ATTGATTCACTACTATCACAGCGCAAATCAGATGGTGAACATGAGTCAAGTAGGAGGTT 1311
consensus_2835#1      TAATGATGAAGC-CGATGCCCCTGCCAATGAGTTTGTGACTG-----CCAGGACAAAGTT 938
                       * ****  *   * **  *   ** *** ** * ****        * ** *  * ***

consensus_2835#0      GAAAACACAGTTTCTAATCGAGATGGAAGGTTTTGACAGTGGAAATGATCAAATTTTACT 1371
consensus_2835#1      GGAGATGGATTCTGTGCAAAAGTATGGGCATAATGGTACTCAAGGTGCTTCTGTATC-CC 997
                      * * *   * * * *     **   *    *  **  * *  *  ** *    * *  * 

consensus_2835#0      TATAGGTACCTCATGCGTTAAAAAGATGAAAATATCAAGTGTGATATGCATTAATGTATG 1431
consensus_2835#1      CACAATGTGATAACAACCCAAATAACCGGAATTAT--GGTGTAAGGCCAACC--TGGAAT 1053
                       * *      * *      *** *   * ** ***   **** *     *    ** *  

consensus_2835#0      TCATGGTAGGAATTACAGGATATTTATATGTATGAGGTTTGAGCATCAACATAGTATGTG 1491
consensus_2835#1      TCTCGTCGTGGATTACGTGGTAATTTTGTTCCTCCTATC--AGAAATAATGGAGGATCCA 1111
                      **  *    * *****  * ** ** * *   *    *   ** *  **   ** **   

consensus_2835#0      CTTTTCTATTGTCCTTGTGAAATGCATTATTGCATATCCATCTTTGCCTAAAGGCCTATG 1551
consensus_2835#1      CTTCCAATATGACCTCACGGG-----TCATTGGAAAAA-ATGATGATTCAATGGGAGATT 1165
                      ***      ** ***   *       * **** * *   **  *     ** **   ** 

consensus_2835#0      CTTTGAAGTTGTGTTGCATAGTCTATGAGGTGGATGTTAAATGTGGGGTCATAACCAATG 1611
consensus_2835#1      CAACAAGA-------AAATGGTCTGT-ATTTCCATCTTGATCATATGAT----ACCATTT 1213
                      *    *           ** **** * *  *  ** ** *   *  * *    **** * 

consensus_2835#0      GTGGAACTTAGATTGGGCTGATGTCATGGAGAAAAAATGATGGCAGGAGCAACAAACAGA 1671
consensus_2835#1      G---AATTTACTTTTATCT----TCATG---------TTATTGTAACAATTTACATGACA 1257
                      *   ** ***  **   **    *****         * ** * *  *      *  * *

consensus_2835#0      CCTCAAGAACTGGATGAAGCAGCACGGAGGCGACTTACAAAACGTCTATATATTCCCCTT 1731
consensus_2835#1      TTTACATAGCTATTTATCTCGTTGCTTTTCTTATGTTTAGCATGACTACATCTTTTCCTT 1317
                        *  * * **   *    *    *       *  *  *  * * *** ** **  ****

consensus_2835#0      CCTTCATCAGAGGCACGGGCCTGGATA-ATTCGCAATCTATTGGAGAAGGATGGCCTTTT 1790
consensus_2835#1      TTTTT-TCTAAGACTCAGATTTATTGGTACTAGAAGCAAAGTACATGAGATACATTTCTT 1376
                        **  **  ** * * *   *      * * * *    * *  *  **       * **

consensus_2835#0      CAAGCTCACAGAGGAAGAAACAAATATTGTTTGCAAGTTAACAGA---AGGTTACT---- 1843
consensus_2835#1      TGACTTCATTGCCATAATGTGTTTTTTGTTTTGCAATTGAGATGACTAAGATTATCACTA 1436
                        *  ***  *    *        * *  ******* * *   **   ** ***      

consensus_2835#0      CAGGATCTGACATGAAAAATCTTGTGAAAGATGCCT--CAATGGGACCACTAAGGGAAGC 1901
consensus_2835#1      TCATATTCAGTATGATTGCCTTTCTTACATCTGTTTGGTGATTTGGACACTGGTTTGCAT 1496
                          **     ****      ** * * *  **  *    **  *  ****         

consensus_2835#0      TCTTCAACAGGGTGTTGGCATAACAAAGCTAAACAAGGAGGACATGCGGCCGGTGATGCT 1961
consensus_2835#1      TTTTTG-CTGGGTATCCTTGTTGTAGACGTTGCTTTAAAGTCAATGTAGT-----GTGTT 1550
                      * **   * **** *     *   * *  *        **   ***  *       ** *

consensus_2835#0      CAAGGATTTTGAGACTGCTTTGCAGGAGGTTAGACCTTCTGTTTCCTCAAGTGAACTGGG 2021
consensus_2835#1      AAAGAACT---AGGTAAATTTCTGGATGGCAATATTACCTGTTACTT--AACAATTTCAG 1605
                       *** * *   **     ***   *  **  * *    ***** * *  *   *  *  *

consensus_2835#0      AACTTATGAAGAATGGAACAGGCAATTTGGGAGCTTAGCAAATTAATTTGCAGGGAGATG 2081
consensus_2835#1      AACA---AGAGTATGAATTGATCAAGTGGATATAGCAGCA--TTAGTATGATAATAGATA 1660
                      ***      ** *** *     *** * *  *    ****  *** * **     **** 

consensus_2835#0      TTGAAACCTTGAAGGCGCTAGTATGCTTTCCCATGCAAAGCATGCGAAACATATGCTTGC 2141
consensus_2835#1      TTT--------------------------------------------------------- 1663
                      **                                                          

consensus_2835#0      GAGAGTCGACAGAGGACAATGAAGCATACCTTGTGCAGCCATATACCTTCAGACTACTTG 2201
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      TGATCACTGATGCAGGTATTCCTTGCCTCTCAGCTGAAAGACTTCCAAAGGCGCTGCAAA 2261
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      TCTGATGGTTTGGATGCGTGTTATTTTTGCTCAATGTCAAGTATGCTGGCAGTTGGTGAT 2321
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      GCTGTATGAGTTGGTCTTGTGGTGCTTCAAAAGAAGCTACTTCGAGGAGTCGCAGGAATT 2381
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      TTCATTCTTTGCAAAGCAAGCTACCAATGTTCAGTAAAGCGGTGTTTATCTGTATGCATT 2441
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      CAGCTATTTTGTTACTATGGTGCTGAATGCATAATGCATATCCTAAATTCCTAATTATGA 2501
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      TGTTATGTTTTTTTTTTTTTTTTGCTTTCTTGTGGTTTGTTTAATTCTGTCACAGATTCG 2561
consensus_2835#1      ------------------------------------------------------------
                                                                                  

consensus_2835#0      ATGAAACTGCCCTATGC 2578
consensus_2835#1      -----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)