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Oryza sativa
cluster # 2851 cluster # 2851       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2851#0 length = 2025 sequences # 2  

consensusID : consensus_2851#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2025
fasta sequence
                              [TGCCGCTCTTCCGCGCGGCGGCGCTCCGCCGGCTGCTCTCCACCGCGGCGGCTTCGTCGGCACCCCCGAAGCTATGGAACCTTCCCTACCGCCTCCGGCGCGCCGCCGTCCCCGCCGCGCGCGCCGCCGTCTCCGAGTACCTCCACGCCACGCGCTGCCTTCCCTCCTCCCACGCCGACACCATCGCCGCGCGCTCCCCGCGCTCCCTGCACGCCTTCCTCGCCGGCCTCCCCGCTGTGCCCAGCTCCCTCCGCACCTCCGCTTTCCCCTCCCTCCTCCGCCGCCACCTCGCCTTCCACCCGCTCAACGAGCTCCCCTTCTTCCTCGAGTCCATCGGCCTGCCCCCGACCACGCGCTCCGACCTCATGTTCCTCGCCGACCACCCGTCCCTCCTCCCAGCCGTCGCCGCGCTCGCGCATTTCGGCTTCCCCTGGTCCCGCCTCGGCCTCCTCTTCCCCACCGTCCTCCTCCGCCTCCCGCCCGACCTCATCACCTCCCGCCTTGCCTCTCTCGAGGCTTGCCTCGGCCCGCTCCCCCGTGCCGCCATCATCGCCGCCTGCCTCGCCTTCCCCTCGCTTCTTGAGAACGATCTCTCCAGCAGTGACCGTCTCGTCGACGATCTTGGCAAGGTGTTTGGAAGGCTGGGCCCTGGTTTGGGGACCTCCAATGACATCGATGCTTTCTTGGGGGTTTGCCGCAGGACATGGATGTTCTATGATGCTGGTTCAGAGGTCGGGGGCATTGGGGACCTTGTCGGCTGCAACAACCAGAGGGTGTTTCTTGAGCTTGAGGAGGAGAGGATTGGTAAAATGTTGAAGTTTTTCAAGGGGTTGGGGATGGCGGGAGAGGAGGTGGGGAGATTCTTGCTTACCAATCCCATGGTTTTTTATCTTGAATTTGGTGATGTTGTCATTTCGGTGCCGGAGTACCTGAGGAGAGTTGGTTTGGCAGTGAATGAGGTTAATGCAGCGGTGGAGAAGCACCCGTACGTTGTTGGGAAGAACCTGCTGCAGAACCTCCCTGGTGTGCTGCGGGCAATGGAACTGGATCATTGGTTCCTGGAGAAGATTTCTGATGGTGGGGAGAGTTTGCGGTATTTATTTCCAGATTTTGTGTTGGAGGATGTTAGTTATGACGTTGAGATTGAGCGAGCATCCTTGGGAGGGATGATTAAGATGAAGGCTGATAAAAGAGCTCAGCATATTGACGGCAAGCTGGAATTCTTGAAGAGCATTGGATATGGTGAGAATAAGATAGCCACAAAGATAATAGCCGTACTGCACAGCAATCGGGATACTCTGCAAGAGAGATTTGATTGCCTCCTGGAAAGAGGGTTGGAGTACAAGATGCTGTGTCAGATCGTGAGTGTATTCCCAAAGATTCTCAACCAGGGAAAGAAGATGCTTAATGACAAGTTGAACTATATGACTAAGGAGCTAGGATACTCAGTGGAGTACCTCGAGTTATTTCCAGCATTTCTGTGCTTTGATTTGGAGAACCGGGTAAAGCCTAGGTATACAATGCTTCGGTGGCTCCGAGAGAATGGTCTTCTTAGAAGAACATTAGCCCCTGCAACTGTGCTTGCTAACTCAGAGAAGAGGTTCATTTCCAACCTGTACAATGTGCATCCTGCAGCTCCAAAGCTGTGGCTTGAGTGCTTTTCTTCAAGAAAGCACATGGAGTATTATCTCAGGAACATATATCACCAGCATGCTGATACCAAATAATTT-AATGTATTT-AATTCTATTGATACGATTCTGAGAGGTTAATGATTGTTA-CCTGCGAGTCTTTTGTGGCAT-CCCTCTCCCTATTGAGGGTA-CTTCTTAGTTGCTACAGGTTTCACTCTGCAAAATTCTTTGCTCCTGCATATTTTAACAATAGTATGCAGGATGTAGGATGGAGTAGAATATAGCAATGGAAAATGAATGTAACTTAATTTCCATAAAAACTGAGTTGTACATTGTACCTGAATAATTTATAGGTTGTAACTGATCTTGGCTTCGTTTATTCATGAGTGCATGGCTT]

[+] EMBL AK106929             [TGCCGCTCTTCCGCGCGGCGGCGCTCCGCCGGCTGCTCTCCACCGCGGCGGCTTCGTCGGCACCCCCGAAGCTATGGAACCTTCCCTACCGCCTCCGGCGCGCCGCCGTCCCCGCCGCGCGCGCCGCCGTCTCCGAGTACCTCCACGCCACGCGCTGCCTTCCCTCCTCCCACGCCGACACCATCGCCGCGCGCTCCCCGCGCTCCCTGCACGCCTTCCTCGCCGGCCTCCCCGCTGTGCCCAGCTCCCTCCGCACCTCCGCTTTCCCCTCCCTCCTCCGCCGCCACCTCGCCTTCCACCCGCTCAACGAGCTCCCCTTCTTCCTCGAGTCCATCGGCCTGCCCCCGACCACGCGCTCCGACCTCATGTTCCTCGCCGACCACCCGTCCCTCCTCCCAGCCGTCGCCGCGCTCGCGCATTTCGGCTTCCCCTGGTCCCGCCTCGGCCTCCTCTTCCCCACCGTCCTCCTCCGCCTCCCGCCCGACCTCATCACCTCCCGCCTTGCCTCTCTCGAGGCTTGCCTCGGCCCGCTCCCCCGTGCCGCCATCATCGCCGCCTGCCTCGCCTTCCCCTCGCTTCTTGAGAACGATCTCTCCAGCAGTGACCGTCTCGTCGACGATCTTGGCAAGGTGTTTGGAAGGCTGGGCCCTGGTTTGGGGACCTCCAATGACATCGATGCTTTCTTGGGGGTTTGCCGCAGGACATGGATGTTCTATGATGCTGGTTCAGAGGTCGGGGGCATTGGGGACCTTGTCGGCTGCAACAACCAGAGGGTGTTTCTTGAGCTTGAGGAGGAGAGGATTGGTAAAATGTTGAAGTTTTTCAAGGGGTTGGGGATGGCGGGAGAGGAGGTGGGGAGATTCTTGCTTACCAATCCCATGGTTTTTTATCTTGAATTTGGTGATGTTGTCATTTCGGTGCCGGAGTACCTGAGGAGAGTTGGTTTGGCAGTGAATGAGGTTAATGCAGCGGTGGAGAAGCACCCGTACGTTGTTGGGAAGAACCTGCTGCAGAACCTCCCTGGTGTGCTGCGGGCAATGGAACTGGATCATTGGTTCCTGGAGAAGATTTCTGATGGTGGGGAGAGTTTGCGGTATTTATTTCCAGATTTTGTGTTGGAGGATGTTAGTTATGACGTTGAGATTGAGCGAGCATCCTTGGGAGGGATGATTAAGATGAAGGCTGATAAAAGAGCTCAGCATATTGACGGCAAGCTGGAATTCTTGAAGAGCATTGGATATGGTGAGAATAAGATAGCCACAAAGATAATAGCCGTACTGCACAGCAATCGGGATACTCTGCAAGAGAGATTTGATTGCCTCCTGGAAAGAGGGTTGGAGTACAAGATGCTGTGTCAGATCGTGAGTGTATTCCCAAAGATTCTCAACCAGGGAAAGAAGATGCTTAATGACAAGTTGAACTATATGACTAAGGAGCTAGGATACTCAGTGGAGTACCTCGAGTTATTTCCAGCATTTCTGTGCTTTGATTTGGAGAACCGGGTAAAGCCTAGGTATACAATGCTTCGGTGGCTCCGAGAGAATGGTCTTCTTAGAAGAACATTAGCCCCTGCAACTGTGCTTGCTAACTCAGAGAAGAGGTTCATTTCCAACCTGTACAATGTGCATCCTGCAGCTCCAAAGCTGTGGCTTGAGTGCTTTTCTTCAAGAAAGCACATGGAGTATTATCTCAGGAACATATATCACCAGCATGCTGATACCAAATAATTT AATGTATTT AATTCTATTGATACGATTCTGAGAGGTTAATGATTGTTA CCTGCGAGTCTTTTGTGGCAT CCCTCTCCCTATTGAGGGTA CTTCTTAGTTGCTACAGGTTTCACTCTGCAAAATTCTTTGCTCCTGCATATTTTAACAATAGTATGCAGGATGTAGGATGGAGTAGAATATAGCAATGGAAAATGAATGTAACTTAATTTCCATAAAAACTGAGTTGTACATTGTACCTGAATAATTTATAGGTTGTAACTGATCTTGGCTTCGTTTATTCATGAGTGCATGGCTT]
[+] EMBL CA764229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCCGTACGTTGTTGGGAAGAACCTGCTGCAGAACCTCCCTGGTGTGCTGCGGGCAATGGAACTGGATCATTGGTTCCTGGAGAAGATTTCTGATGGTGGGGAGAGTTTGCGGTATTTATTTCCAGATTTTGTGTTGGAGGATGTTAGTTGTGACGTTGAGATTGAGCGAGCATTCTTGGGAGGGATGATTAAGATGAAGGCTGATAAAAGAGCTCAGCATATTGACGGCAAGCTGGAATTCTTGAAGAGCATTGGATATGGTGAGAATGAGATAGCCACAAAGATAATAGCCGTACTGCACAGCAATCGGGATACTCTGCAGGAGAGATTTGATTGCCTCCTGGAAAGAGGGTTGGAGTACAAGATGCTGTGTCAGATCGTGAGTGTATTCCCAAAGATTCTCAACCAGGGAAAGAAGATGCTTAATGACAAGTTGAACTATATGACTAAGGAGCTAGGATACTCAGTGGAGTACCTCGAGTTATTTCCAGCATTTCTGTGCTTTGATTTGGAGAAGCGGGTAAAGCCTAGGTATACAATGCTTCGGTGGCTCCGAGAGAATGGTCTTCTTAGAAGAACATTAGCCCCTGCAACTGTGCTTGCTAACTCAGAGAAGAGGNTCATTTCCAACCTGTACAATGTGCATCCTGCAGCTCCAAAGCTGTGGCTTGAGTGCTTTTCTTCAAGAAAGCACATGGAGTATTATCTCANGAACATATATCACCAGCATGCTGATACCAAATAATTTAAATGGATTTAAATTCTATTGATACGATTCTGAGANGGTAATGATTGGTACCCTGCGAGTCTTTTGNGGCATNCCCTCTNCCTATTGAGGGTACCTTCTTANTTGCTACAGGNTTCACTCTGCA                                                                                                                                                                                ]


>consensus_2851#0 TGCCGCTCTTCCGCGCGGCGGCGCTCCGCCGGCTGCTCTCCACCGCGGCGGCTTCGTCGG CACCCCCGAAGCTATGGAACCTTCCCTACCGCCTCCGGCGCGCCGCCGTCCCCGCCGCGC GCGCCGCCGTCTCCGAGTACCTCCACGCCACGCGCTGCCTTCCCTCCTCCCACGCCGACA CCATCGCCGCGCGCTCCCCGCGCTCCCTGCACGCCTTCCTCGCCGGCCTCCCCGCTGTGC CCAGCTCCCTCCGCACCTCCGCTTTCCCCTCCCTCCTCCGCCGCCACCTCGCCTTCCACC CGCTCAACGAGCTCCCCTTCTTCCTCGAGTCCATCGGCCTGCCCCCGACCACGCGCTCCG ACCTCATGTTCCTCGCCGACCACCCGTCCCTCCTCCCAGCCGTCGCCGCGCTCGCGCATT TCGGCTTCCCCTGGTCCCGCCTCGGCCTCCTCTTCCCCACCGTCCTCCTCCGCCTCCCGC CCGACCTCATCACCTCCCGCCTTGCCTCTCTCGAGGCTTGCCTCGGCCCGCTCCCCCGTG CCGCCATCATCGCCGCCTGCCTCGCCTTCCCCTCGCTTCTTGAGAACGATCTCTCCAGCA GTGACCGTCTCGTCGACGATCTTGGCAAGGTGTTTGGAAGGCTGGGCCCTGGTTTGGGGA CCTCCAATGACATCGATGCTTTCTTGGGGGTTTGCCGCAGGACATGGATGTTCTATGATG CTGGTTCAGAGGTCGGGGGCATTGGGGACCTTGTCGGCTGCAACAACCAGAGGGTGTTTC TTGAGCTTGAGGAGGAGAGGATTGGTAAAATGTTGAAGTTTTTCAAGGGGTTGGGGATGG CGGGAGAGGAGGTGGGGAGATTCTTGCTTACCAATCCCATGGTTTTTTATCTTGAATTTG GTGATGTTGTCATTTCGGTGCCGGAGTACCTGAGGAGAGTTGGTTTGGCAGTGAATGAGG TTAATGCAGCGGTGGAGAAGCACCCGTACGTTGTTGGGAAGAACCTGCTGCAGAACCTCC CTGGTGTGCTGCGGGCAATGGAACTGGATCATTGGTTCCTGGAGAAGATTTCTGATGGTG GGGAGAGTTTGCGGTATTTATTTCCAGATTTTGTGTTGGAGGATGTTAGTTATGACGTTG AGATTGAGCGAGCATCCTTGGGAGGGATGATTAAGATGAAGGCTGATAAAAGAGCTCAGC ATATTGACGGCAAGCTGGAATTCTTGAAGAGCATTGGATATGGTGAGAATAAGATAGCCA CAAAGATAATAGCCGTACTGCACAGCAATCGGGATACTCTGCAAGAGAGATTTGATTGCC TCCTGGAAAGAGGGTTGGAGTACAAGATGCTGTGTCAGATCGTGAGTGTATTCCCAAAGA TTCTCAACCAGGGAAAGAAGATGCTTAATGACAAGTTGAACTATATGACTAAGGAGCTAG GATACTCAGTGGAGTACCTCGAGTTATTTCCAGCATTTCTGTGCTTTGATTTGGAGAACC GGGTAAAGCCTAGGTATACAATGCTTCGGTGGCTCCGAGAGAATGGTCTTCTTAGAAGAA CATTAGCCCCTGCAACTGTGCTTGCTAACTCAGAGAAGAGGTTCATTTCCAACCTGTACA ATGTGCATCCTGCAGCTCCAAAGCTGTGGCTTGAGTGCTTTTCTTCAAGAAAGCACATGG AGTATTATCTCAGGAACATATATCACCAGCATGCTGATACCAAATAATTTAATGTATTTA ATTCTATTGATACGATTCTGAGAGGTTAATGATTGTTACCTGCGAGTCTTTTGTGGCATC CCTCTCCCTATTGAGGGTACTTCTTAGTTGCTACAGGTTTCACTCTGCAAAATTCTTTGC TCCTGCATATTTTAACAATAGTATGCAGGATGTAGGATGGAGTAGAATATAGCAATGGAA AATGAATGTAACTTAATTTCCATAAAAACTGAGTTGTACATTGTACCTGAATAATTTATA GGTTGTAACTGATCTTGGCTTCGTTTATTCATGAGTGCATGGCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)