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Oryza sativa
cluster # 2921 cluster # 2921       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2921#0 length = 1423 sequences # 2  

consensusID : consensus_2921#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1423
fasta sequence
                              [GCATCGCCCATTTCGCTCATGGATCAGTAGGCAGCCAATCATTCTAGCTTCCATCTCAAAAACCAGTAGCACATCATCATCATCATCATCATCTCAACCTCAATCTCAAGCTACAAAATCCTCCAAGAATTCCAAGAAACCAAAGGCTTGACACTATTGCATTGGATTGGCGGCATGAGGAGAGGAGGCTTCCATGGCGCGGCGGCGGCGTCGCCGACGACGGTGGCGAGGGCGGGGAGGGTGATGAGGGCGGCGGTGGCGGCGTTCTTCCATGGCTACCATTGCTACACCTCCGTGGCGGGGCTGCTGGTGCTGCCGTTCTCGGCCGCCGTGCTGGCGTCGGGCGCCATGGCGTCGCCGTCGTCGGGAGCGCTGGCGGCGGTGTCGGCGAGGATACGGCGCATGTTCGACGCCGCCGGGTTCCCGCCGTCGTCGTTCTTCGCGCTGTTCAACGCCAAGCTGTCGCAGACGGTGTTCACGTTCGCCGCCGCGCTGCCGTTCACGCTCACGTTCCTGCTCCTCGCCAAGGCGTGCGTCGCGGCGATGCTCCGGCCGGACGACGATGGCGAAGGCGTGGCGCGGCGAGGGCGCGGCGTGGCGAGGGCGACGCGGCTCCCGCCGTGCGGGAGCGTGGCGGGCGCGTACCCGGCGATGGTGGCGACGCACCTGTTCGGCGCGTTCGTGATGCTGTCCGCGAACGCCGCCGTGTTCTCCCTCATGTTCCTCGCCTTCAACGGCGCCGACCTCCTGGGCCTCACCACCACCTCCCACGCCGCGGCGACGCTCGCGCTGTCCGCCGCGGGCGCCATCGCCTACTCGGTGGCCGTGGGGATCGCCACCGTGGTCTGCAACCTCGCCGTGGTGGTGTCCGCCATGGAGCGCCGCGCGGGCCACGCCGCGGTGCTCAGGGCGTGCGTCGTCATCCGCGGCCGCGTGCCCACCGCGCTGGCGCTCGCGCTCCCGACCAACCTCGGCATGGCCGCCGCGGAGGCGCTGTTCCAGCTCCGCGTCGTGTCGCAGGCGCAACGCCACCGCCTCGCCGGCGCCGGCGACGGCAAGAGGCTCGCGGCGGGCGTCGCCGGCGAGGCGTTCTCCATCGCGTACATCCACGCGCTCTGCGTCGTGCTCGAGATCATCGTGAGCTGCATGTTCTACCGGAGTTGCAGGAGAAGCGAGGTCGACGAGCTCAGAGAGCTCGAGCCAGAGGAGAAGGGTGACCTCCAAGCTTGAGCTCAAGTGTAAAAGAAAGTGTTAAAAAAATTTTAAAAATGAATAGATGTAGCATTTGAAAATTTCAAATAGGTTTGAAATTATGATGAGCATATATGAATTGAGATAGAATTATTCTGGAAATTGTTTTTTTGTTTTGTTGGGAGTAAATTAATGGTATATTGGGGTTAATAAATAATGAATGGATGATTCT]

[+] EMBL AK106267             [GCATCGCCCATTTCGCTCATGGATCAGTAGGCAGCCAATCATTCTAGCTTCCATCTCAAAAACCAGTAGCACATCATCATCATCATCATCATCTCAACCTCAATCTCAAGCTACAAAATCCTCCAAGAATTCCAAGAAACCAAAGGCTTGACACTATTGCATTGGATTGGCGGCATGAGGAGAGGAGGCTTCCATGGCGCGGCGGCGGCGTCGCCGACGACGGTGGCGAGGGCGGGGAGGGTGATGAGGGCGGCGGTGGCGGCGTTCTTCCATGGCTACCATTGCTACACCTCCGTGGCGGGGCTGCTGGTGCTGCCGTTCTCGGCCGCCGTGCTGGCGTCGGGCGCCATGGCGTCGCCGTCGTCGGGAGCGCTGGCGGCGGTGTCGGCGAGGATACGGCGCATGTTCGACGCCGCCGGGTTCCCGCCGTCGTCGTTCTTCGCGCTGTTCAACGCCAAGCTGTCGCAGACGGTGTTCACGTTCGCCGCCGCGCTGCCGTTCACGCTCACGTTCCTGCTCCTCGCCAAGGCGTGCGTCGCGGCGATGCTCCGGCCGGACGACGATGGCGAAGGCGTGGCGCGGCGAGGGCGCGGCGTGGCGAGGGCGACGCGGCTCCCGCCGTGCGGGAGCGTGGCGGGCGCGTACCCGGCGATGGTGGCGACGCACCTGTTCGGCGCGTTCGTGATGCTGTCCGCGAACGCCGCCGTGTTCTCCCTCATGTTCCTCGCCTTCAACGGCGCCGACCTCCTGGGCCTCACCACCACCTCCCACGCCGCGGCGACGCTCGCGCTGTCCGCCGCGGGCGCCATCGCCTACTCGGTGGCCGTGGGGATCGCCACCGTGGTCTGCAACCTCGCCGTGGTGGTGTCCGCCATGGAGCGCCGCGCGGGCCACGCCGCGGTGCTCAGGGCGTGCGTCGTCATCCGCGGCCGCGTGCCCACCGCGCTGGCGCTCGCGCTCCCGACCAACCTCGGCATGGCCGCCGCGGAGGCGCTGTTCCAGCTCCGCGTCGTGTCGCAGGCGCAACGCCACCGCCTCGCCGGCGCCGGCGACGGCAAGAGGCTCGCGGCGGGCGTCGCCGGCGAGGCGTTCTCCATCGCGTACATCCACGCGCTCTGCGTCGTGCTCGAGATCATCGTGAGCTGCATGTTCTACCGGAGTTGCAGGAGAAGCGAGGTCGACGAGCTCAGAGAGCTCGAGCCAGAGGAGAAGGGTGACCTCCAAGCTTGAGCTCAAGTGTAAAAGAAAGTGTTAAAAAAATTTTAAAAATGAATAGATGTAGCATTTGAAAATTTCAAATAGGTTTGAAATTATGATGAGCATATATGAATTGAGATAGAATTATTCTGGAAATTGTTTTTTTGTTTTGTTGGGAGTAAATTAATGGTATATTGGGGTTAATAAATAATGAATGGATGATTCT]
[-] EMBL CB967153             [                                                                                                                                                                                                                                                                               ATGGCTACCATTGCTACACCTCCGTGGCGGGCNTGCTGGTGCTGCCGTTCTCGGCCGCCGTGCTGGCGTCGGGCGCCATGGCGTCGCCGTCGTCGGGAGCGCTGGCGGCGGTGTCGGCGAGGATACGGCGCATGTTCGACGCCGCCGGGTTCCCGCCGTCGTCGTTCTTCGCGCTGCTCAACGCCAAGCTGTCGCAGACGGTGTTCACGTTCGCCGCCGCGCTGCCGTTCACGCTCACGTTCCTGCTCCTCGCCAAGGCGTGCGTCGCGGCGATGCTCCGGCCGGACGACGATGGCGAAGGCGTGGCGCGGCGAGGGCGTGGCGTGGCGAGGGCGACGCGGCTCCCGCCGTGCGGGAGCGTGGCGGGCGCGTACCCGGCGATGGTGGCGACGCACCTGTTCGGCGCGTTCGTGATGCTGTCCGCGAACGCCGCCGTGTTCTCTCTCATGTTCCTCGCCTTCAACGGCGCCGACCTCCTGGGCCTCACCACCACCTCCCACGCCGCGGCGACGCTCGCGCTCTCCGCCGCGGGCGCCATCGCCTACTCGGTGGCCGTGGGGATCGCCACCGTGGTCTGCAACCTCGCCGTGGTGGTGTCCGCCATGGAGCGCCGCGCGGGCCACGCCGCGGTGCTCAGGGCGTGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_2921#0 GCATCGCCCATTTCGCTCATGGATCAGTAGGCAGCCAATCATTCTAGCTTCCATCTCAAA AACCAGTAGCACATCATCATCATCATCATCATCTCAACCTCAATCTCAAGCTACAAAATC CTCCAAGAATTCCAAGAAACCAAAGGCTTGACACTATTGCATTGGATTGGCGGCATGAGG AGAGGAGGCTTCCATGGCGCGGCGGCGGCGTCGCCGACGACGGTGGCGAGGGCGGGGAGG GTGATGAGGGCGGCGGTGGCGGCGTTCTTCCATGGCTACCATTGCTACACCTCCGTGGCG GGGCTGCTGGTGCTGCCGTTCTCGGCCGCCGTGCTGGCGTCGGGCGCCATGGCGTCGCCG TCGTCGGGAGCGCTGGCGGCGGTGTCGGCGAGGATACGGCGCATGTTCGACGCCGCCGGG TTCCCGCCGTCGTCGTTCTTCGCGCTGTTCAACGCCAAGCTGTCGCAGACGGTGTTCACG TTCGCCGCCGCGCTGCCGTTCACGCTCACGTTCCTGCTCCTCGCCAAGGCGTGCGTCGCG GCGATGCTCCGGCCGGACGACGATGGCGAAGGCGTGGCGCGGCGAGGGCGCGGCGTGGCG AGGGCGACGCGGCTCCCGCCGTGCGGGAGCGTGGCGGGCGCGTACCCGGCGATGGTGGCG ACGCACCTGTTCGGCGCGTTCGTGATGCTGTCCGCGAACGCCGCCGTGTTCTCCCTCATG TTCCTCGCCTTCAACGGCGCCGACCTCCTGGGCCTCACCACCACCTCCCACGCCGCGGCG ACGCTCGCGCTGTCCGCCGCGGGCGCCATCGCCTACTCGGTGGCCGTGGGGATCGCCACC GTGGTCTGCAACCTCGCCGTGGTGGTGTCCGCCATGGAGCGCCGCGCGGGCCACGCCGCG GTGCTCAGGGCGTGCGTCGTCATCCGCGGCCGCGTGCCCACCGCGCTGGCGCTCGCGCTC CCGACCAACCTCGGCATGGCCGCCGCGGAGGCGCTGTTCCAGCTCCGCGTCGTGTCGCAG GCGCAACGCCACCGCCTCGCCGGCGCCGGCGACGGCAAGAGGCTCGCGGCGGGCGTCGCC GGCGAGGCGTTCTCCATCGCGTACATCCACGCGCTCTGCGTCGTGCTCGAGATCATCGTG AGCTGCATGTTCTACCGGAGTTGCAGGAGAAGCGAGGTCGACGAGCTCAGAGAGCTCGAG CCAGAGGAGAAGGGTGACCTCCAAGCTTGAGCTCAAGTGTAAAAGAAAGTGTTAAAAAAA TTTTAAAAATGAATAGATGTAGCATTTGAAAATTTCAAATAGGTTTGAAATTATGATGAG CATATATGAATTGAGATAGAATTATTCTGGAAATTGTTTTTTTGTTTTGTTGGGAGTAAA TTAATGGTATATTGGGGTTAATAAATAATGAATGGATGATTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)