cluster # 30

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Oryza sativa
cluster # 30 cluster # 30 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_30#0 length = 654 sequences # 2

consensusID : consensus_30#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 654
fasta sequence

                              [TTTTTTTTTTTTTCCACAAAAGATTGCATGGTCCCATGCATTTCAAATTCAACATGTCTAAAAATGAAGTATCCTTACATCCATCCACCAGTTTAATACATATCCGAAGGCACAAAATATATCTCCTTGCTACGGGGAGGGCAACAGTAACCCAGATGCAAAAGCCCACACGGCAATACCATCAGTGCATTGGCCAGAAGTACATCATCAACAGGACGACGACAAAACGCACAGTACCCTCGATGTAACTTCCCACAAGCGCAATGGTGGCAGGCTCAGTGTCACTTAATGTTCAAACGTATTGCTGCTTCAGCCTGTTCATCTGCCGCAGGGTAACGCGCCCGACGGCTCTATCCCTAAGGAGGCCGAAACCTCTGGCGGTGAACAGACAGGGGCGGAGGCAAACCACATGCGCCACATCGGCTTGGCCTTCCAAGACTGGCATGACCGCAGACGACTGGAGGCAAGGTTGATCCAACGCCAGCCGCAAGCTCTGCACAGTGCTTGCCCAGGGTAGATGCATTATGGCCAGCAAATGAGTACCGTATGGAACTTAAAAAGAACCAGTAGTTGGCCCATGCTAAGGCTACGGGGACATTCGTTAAGGCGGCCCAAACACTAAAGAAAGGACAGGTTTTAACAATCGGTATATAC]

[+] EMBL CA761478             [TTTTTTTTTTTTTCCACAAAAGATTGCATGGTCCCATGCATTTCAAATTCAACATGTCTAAAAATGAAGTATCCTTACATCCATCCACCAGTTTAATACATATCCGAAGGCACAAAATATATCTCCTTGCTACGGGGAGGGCAACAGTAACCCAGATGCAAAAGCCCACACGGCAATACCATCAGTGCATTGGCCAGAAGTACATCATCAACAGGACGACGACAAAACGCACAGTACCCTCGATGTAACTTCCCACAAGCGCAATGGTGGCAGGCTCAGTGTCACTTAATGTTCAAACGTATTGCTGCTTCAGCCTGTTCATCTGCCGCAGGGTAACGCGCCCGACGGCTCTATCCCTAAGGAGGCCGAAACCTCTGGCGGTGAACAGACAGGGGCGGAGGCAAACCACATGCGCCACATCGGCTTGGCCTTCCAAGACTGGCATGACCGCAGACGACTGGAGGCAAGGTTGATCCAACGCCAGCCGCAAGCTCTGCACAGTGCTTGCCCAGGGTAGATGCATTATGGCCAGCAAATGAGTACCGTATGGAACTTAAAAAGAACCAGTAGTTGGCCCATGCTAAGGCTACGGGGACATTCGTTAAGGCGGCCCAAACACTAAAGAAAGGACAGGTTTTAACAATCGGTATATAC]
[+] EMBL CA761439             [TTTTTTTTTTTTTCCACAAAAGATTGCATGGTCCCATGCATTTCAAATTCAACATGTCTAAAAATGAAGTATCCTTACATCCATCCACCAGTTTAATACATATCCGAAGGCACAAAATATATCTCCTTGCTACGGGGAGGGCAACAGTAACCCAGATGCAAAAGCCCACACGGCAATACCATCAGTGCATTGGCCAGAAGTACATCATCAACAGGACGACGACAAAACGCACAGTACCCTCGATGTAACTTCCCACAAGCGCAATGGTGGCAGGCTCAGTGTCACTTAATGTTCAAACGTATTGCTGCTTCAGCCTGTTCATCTGCCGCAGGGTAACGCGCCCGACGGCTCTATCCCTAAGGAGGCCGAAACCTCTGGCGGTGAACAGACAGGGGCGGAGGCAAACCACATGCGCCACATCGGCTTGGCCTTCCAAGACTGGCATGACCGCAGACGACTGGAGGCAAGGTTGATCCAACGCCAGCCGCAAGCTCTGCACAGTGCTTGCCCAGGGTAGATGCATTATGGCCAGCAAATGAGTACCGTATGGAACTTAAAAAGAACCAGTAGTTGGCCCATGCTAAGGCTACGGGGACATTCGTTAAGGCGGCCCAAACACTAAAGAAAGGACAGGTTTTAACAATCGGTATATAC]




>consensus_30#0
TTTTTTTTTTTTTCCACAAAAGATTGCATGGTCCCATGCATTTCAAATTCAACATGTCTA
AAAATGAAGTATCCTTACATCCATCCACCAGTTTAATACATATCCGAAGGCACAAAATAT
ATCTCCTTGCTACGGGGAGGGCAACAGTAACCCAGATGCAAAAGCCCACACGGCAATACC
ATCAGTGCATTGGCCAGAAGTACATCATCAACAGGACGACGACAAAACGCACAGTACCCT
CGATGTAACTTCCCACAAGCGCAATGGTGGCAGGCTCAGTGTCACTTAATGTTCAAACGT
ATTGCTGCTTCAGCCTGTTCATCTGCCGCAGGGTAACGCGCCCGACGGCTCTATCCCTAA
GGAGGCCGAAACCTCTGGCGGTGAACAGACAGGGGCGGAGGCAAACCACATGCGCCACAT
CGGCTTGGCCTTCCAAGACTGGCATGACCGCAGACGACTGGAGGCAAGGTTGATCCAACG
CCAGCCGCAAGCTCTGCACAGTGCTTGCCCAGGGTAGATGCATTATGGCCAGCAAATGAG
TACCGTATGGAACTTAAAAAGAACCAGTAGTTGGCCCATGCTAAGGCTACGGGGACATTC
GTTAAGGCGGCCCAAACACTAAAGAAAGGACAGGTTTTAACAATCGGTATATAC

clustalw multiple alignements is not computed in this case