cluster # 3002

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Oryza sativa
cluster # 3002 cluster # 3002 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3002#0 length = 1439 sequences # 2
consensusID : consensus_3002#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1439
fasta sequence
                              [TAGTAAGAAAAATACTGCGTAAAGAAAAGGGGGGATATGAAATATCCATAGTCGATGCATCGGATGGACGCCAAGTGATTGATCTTATACCTCCCGGTCCAGAACTTCTTGTTTCAGAGGGGGAATCGATCAAGCTTGATCAACCATTAACAAGTAATCCTAATGTGGGAGGGTTTGGTCAGGGGGATGCAGAAATAGTGCTTCAGGATCCATTACGCGTTCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACAAGTTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCCCGGGATTTCTTACCATCAAGTTGGTAAAAAGCCGCGATTTATTGGCGATTGCTAGAATTCTCTATGATCCATTTTGGAAATCTTTTTTTTGTTTAGACTATTTTTTGTTTGCGAGATGTCTTGTCTGCAATTCCTTATTTCTATCATCTCATGCAAAACGAGGAGAATGCAAGGCAAGGGCGAGAACAATAAAAGGAACAAATCCTTTTAGGAGGGATTGCTGGTCTTCTTAATCCTCTATTGGGCACAAGAAAAAGGCTTTTTTGCCTTTTTCTTGTGTCGATTCTTCTTGTATCGAAATATGAATCTTTTTTCTTCCTATTCGGCAAAGATTACTATTTCTTCTTTATTTGGGTCTGTCTCTTGAACCTCTTTTGCTTAGGTTCAGGCGATGTAGTGGACAAAAAGAGGGAAAGAAAATATGGCGTGGGACAAATTTTTTGTGACCAAATAGAATTGCTTGACTTGTTCAATTAAGTTCAATTTAGAACTTACAGAAATTTTGCAAAAAAAACGGATACTCTTCCATTGAAGGCTGTTTTTTATTTTTAGGCTAGTTGAGTAGTTTTAATTAAGGTTTTATTAGTTTATTACTCTAAATTAAATCAATGATTTACAAGAGACTTCCTCCGGGGAATAAAATATTGGATCCTCGATTGATCCTTTCTTTCTCCTCGCTTCATAAAAGTGAATTAATTTCATTGGCGAGGGGGTTATAAATCAACTGATGGATTACTTCACTAACATTATTAACAAACAAAATTAACAAACAAAACGAATAAATAGAGGGATTCTGACCATCAGAGCAAAGGCTTTCTCTTTGTTATTTTTACAAATCAAAATAGGAAACCCGTTTGTAGGTTATGGAATAGATTAAAAAAGTCGGGTTATAAGAGTAAGAATTCCGCGGGTCCTTTCCGCTCTAATCAGATAAAAGGGGGTAAGGACCCGCTAAGTTCCTATTTTTTCATGTTTACAACCTGGTCCCTCCAATTACTATAGTGGATAAAAAAAAAGGATAAGGAACTACAGGAAAAAGAAAGAAGAAAAAAAAAAAAAAAATAAGAAAGCAGGAAAAGAAAAGAACAAAAGGTGAAAAAAAAGACTGA]

[+] EMBL AK110782             [TAGTAAGAAAAATACTGCGTAAAGAAAAGGGGGGATATGAAATATCCATAGTCGATGCATCGGATGGACGCCAAGTGATTGATCTTATACCTCCCGGTCCAGAACTTCTTGTTTCAGAGGGGGAATCGATCAAGCTTGATCAACCATTAACAAGTAATCCTAATGTGGGAGGGTTTGGTCAGGGGGATGCAGAAATAGTGCTTCAGGATCCATTACGCGTTCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACAAGTTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCCCGGGATTTCTTACCATCAAGTTGGTAAAAAGCCGCGATTTATTGGCGATTGCTAGAATTCTCTATGATCCATTTTGGAAATCTTTTTTTTGTTTAGACTATTTTTTGTTTGCGAGATGTCTTGTCTGCAATTCCTTATTTCTATCATCTCATGCAAAACGAGGAGAATGCAAGGCAAGGGCGAGAACAATAAAAGGAACAAATCCTTTTAGGAGGGATTGCTGGTCTTCTTAATCCTCTATTGGGCACAAGAAAAAGGCTTTTTTGCCTTTTTCTTGTGTCGATTCTTCTTGTATCGAAATATGAATCTTTTTTCTTCCTATTCGGCAAAGATTACTATTTCTTCTTTATTTGGGTCTGTCTCTTGAACCTCTTTTGCTTAGGTTCAGGCGATGTAGTGGACAAAAAGAGGGAAAGAAAATATGGCGTGGGACAAATTTTTTGTGACCAAATAGAATTGCTTGACTTGTTCAATTAAGTTCAATTTAGAACTTACAGAAATTTTGCAAAAAAAACGGATACTCTTCCATTGAAGGCTGTTTTTTATTTTTAGGCTAGTTGAGTAGTTTTAATTAAGGTTTTATTAGTTTATTACTCTAAATTAAATCAATGATTTACAAGAGACTTCCTCCGGGGAATAAAATATTGGATCCTCGATTGATCCTTTCTTTCTCCTCGCTTCATAAAAGTGAATTAATTTCATTGGCGAGGGGGTTATAAATCAACTGATGGATTACTTCACTAACATTATTAACAAACAAAATTAACAAACAAAACGAATAAATAGAGGGATTCTGACCATCAGAGCAAAGGCTTTCTCTTTGTTATTTTTACAAATCAAAATAGGAAACCCGTTTGTAGGTTATGGAATAGATTAAAAAAGTCGGGTTATAAGAGTAAGAATTCCGCGGGTCCTTTCCGCTCTAATCAGATAAAAGGGGGTAAGGACCCGCTAAGTTCCTATTTTTTCATGTTTACAACCTGGTCCCTCCAATTACTATAGTGGATAAAAAAAAAGGATAAGGAACTACAGGAAAAAGAAAGAAGAAAAAAAAAAAAAAAATAAGAAAGCAGGAAAAGAAAAGAACAAAAGGTGAAAAAAAAGACTGA]
[+] EMBL BI801923             [                                                                                                                                                                                                                                                                                                                                                                                                                             TTTTTTTGTTTAGACTATTTTTTGTTTGCGAGATGTCTTGTCT CAATTCCTTATTTCTATCATCTCATGCAAACCGAGGAGAATGCAAGCCAAGGGCGAGAAC ATAAAAGGAACAAATCCTTTTAGGAGGGATTGCTGGTCTTCTTAATCCTCTATTGGGCACAAGAAAAAGGCTTTTTT CCTTTTTCTTGTGTCGATTCTTCTTGTATCGAAATATGAATCTTTTTTCTTCCTATTC GCCAAGATTACTATTTCTTCTTTATTTGGGTCTGTCTCTTGAACCTCTTTTGCTTAGGTTCAGCCGATGTAGTGGACAAAAAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_3002#0
TAGTAAGAAAAATACTGCGTAAAGAAAAGGGGGGATATGAAATATCCATAGTCGATGCAT
CGGATGGACGCCAAGTGATTGATCTTATACCTCCCGGTCCAGAACTTCTTGTTTCAGAGG
GGGAATCGATCAAGCTTGATCAACCATTAACAAGTAATCCTAATGTGGGAGGGTTTGGTC
AGGGGGATGCAGAAATAGTGCTTCAGGATCCATTACGCGTTCAAGGCCTTTTGTTCTTCT
TCGCATCCGTTATTTTGGCACAAGTTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGG
TTCAATTGTACGAAATGAATTTCTAGGTCCCGGGATTTCTTACCATCAAGTTGGTAAAAA
GCCGCGATTTATTGGCGATTGCTAGAATTCTCTATGATCCATTTTGGAAATCTTTTTTTT
GTTTAGACTATTTTTTGTTTGCGAGATGTCTTGTCTGCAATTCCTTATTTCTATCATCTC
ATGCAAAACGAGGAGAATGCAAGGCAAGGGCGAGAACAATAAAAGGAACAAATCCTTTTA
GGAGGGATTGCTGGTCTTCTTAATCCTCTATTGGGCACAAGAAAAAGGCTTTTTTGCCTT
TTTCTTGTGTCGATTCTTCTTGTATCGAAATATGAATCTTTTTTCTTCCTATTCGGCAAA
GATTACTATTTCTTCTTTATTTGGGTCTGTCTCTTGAACCTCTTTTGCTTAGGTTCAGGC
GATGTAGTGGACAAAAAGAGGGAAAGAAAATATGGCGTGGGACAAATTTTTTGTGACCAA
ATAGAATTGCTTGACTTGTTCAATTAAGTTCAATTTAGAACTTACAGAAATTTTGCAAAA
AAAACGGATACTCTTCCATTGAAGGCTGTTTTTTATTTTTAGGCTAGTTGAGTAGTTTTA
ATTAAGGTTTTATTAGTTTATTACTCTAAATTAAATCAATGATTTACAAGAGACTTCCTC
CGGGGAATAAAATATTGGATCCTCGATTGATCCTTTCTTTCTCCTCGCTTCATAAAAGTG
AATTAATTTCATTGGCGAGGGGGTTATAAATCAACTGATGGATTACTTCACTAACATTAT
TAACAAACAAAATTAACAAACAAAACGAATAAATAGAGGGATTCTGACCATCAGAGCAAA
GGCTTTCTCTTTGTTATTTTTACAAATCAAAATAGGAAACCCGTTTGTAGGTTATGGAAT
AGATTAAAAAAGTCGGGTTATAAGAGTAAGAATTCCGCGGGTCCTTTCCGCTCTAATCAG
ATAAAAGGGGGTAAGGACCCGCTAAGTTCCTATTTTTTCATGTTTACAACCTGGTCCCTC
CAATTACTATAGTGGATAAAAAAAAAGGATAAGGAACTACAGGAAAAAGAAAGAAGAAAA
AAAAAAAAAAAATAAGAAAGCAGGAAAAGAAAAGAACAAAAGGTGAAAAAAAAGACTGA
clustalw multiple alignements is not computed in this case