cluster # 3007

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Oryza sativa
cluster # 3007 cluster # 3007 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3007#0 length = 1692 sequences # 2
consensusID : consensus_3007#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1692
fasta sequence
                              [CTCGCCTTCTCTTCCTCACCCCTCCTCTCATTTCAAGAAGAACAAGAGAAAGCTAAGAACATTTTCTAGCTCTCAAGTAGTACTCCTATATAATACCAAGAAGAGAAGCAGTAATAGTCTGGGGAGGCTTGAAGGGGGAGGAGAAGCATCAAATCGAAACAGACCAACAGAATCTGAAAAATTTACTAGTGGTAGAACAAGATTAGTCCTTTCCTCTTCCAAATAATAGTGGATTAGCTACTAGTTTATTAGTTCCTTTCTTCTACCAAGTAGTGGATTAGAGATTAGCTACTAGTTTGCACCTTGAAGAGTGATCTAGGATGGCACCGAGCTTTGATTTTGCGGCATCAATCCTCCTTTGCGCGGAGGACAACACCGCCATTCTTGATCTTGGCGAAGAGAGCGAGGAGATTTCTTGGGTTGTTGGGGTTGATGCTTCTCTAGGGGACTTGTCGATGGATTTCCCCTTGCAATCCGATGATTGCATCGAGGCCCTCCTGGGGAGGGAGGAGCAGCAGCACATCCCCATGGAGGGCTACCTCCAGCGGCTTCTGCTGCAGCCTGATGGGCTCGATTTGGTAGCCGTCAGGAGCGACGCCATTGACTGGATTTGGAAGGTACATGAGCTTTATAAGTTTGGGCCTTTGACTGCAGTCCTGTCGGTGAACTACCTGGACCGGTTCCTCTCCGTGTTCGATCTTCCTGTAAAGATCTTTCTCTGCATTGCATTGTTACTGTATTTCATACAAACTCGATTTTTTTATGCTTCTGAGATAAATGCCAAGTCATGGAGCAATTGCATTCTGAGTTTCAGCAAGAGGAGGCTTGTATGACACAACTCTTAGCAGTAGCTTCCTTGTCTTTGGCTGCAAAAATGGAGGAAACCGTTGTTCCACACCCCTTGGACTTGCAGGTGTGTGATGCAAAATATGTGTTTGAGACTAGGACCATAAAAAGGATGGAGCTTGCAGTGCTTAATGCCCTAAAGTGGAGGATGCAAGCTGTGACTGCTTGCTCATTTATCGATTATTACCTTCACAAGTTCAATGATGATGATACTCCGTCCACATCCGCACTCTCACGCTCAGTTGACCTCATCTTGAGTACATGTAAAGTTGCTGAATTCTTGGTTTTCAGACCATCAGAGATCGCGGCCAGTGTAGCTCTAGTAGCATTGGAGGAACATGAAACTTCCATGTTTGAGAGGGTGGCAACTTGTTACAAAAATTTAAAGAAGGAGAGGGT-ATTACGGTGCTATGAAATGATTCAAGATAAG-ATTATTATGAGAAACATTATGCGCCAATCAGCCGGCTCCGTTTTCTCCATTCCAAAAAGCCCCATAGGTGTATTGGATG-CAGCTGCATGTATAAGCCAACAAAGTGAGGACACTTTTGTTGGATCACCTGCAACAAATTATGAGAGCTCGGCGTCAAGCAAAAGGAGGAGAATTTGCAGATGATTGTTTTCGTTGTACATTTGTAGCCTTCAAGTATGTTGCTCACCCA-TTTGTTTTAATGGACCCAAGAACA-TGGTCATTAGGACAGGTTTTTGTAGAGACGAGCAATCTCTTGTTATTTCGCATTCATGCTTCCATATTCATTTTTGAGAGAACCTTGGAGAATGGATATGCTTTGATGATTCTAAAGAAAATATAAAAACAGAGGAAAAGGAAACCATCTGAGAAAAAAAAAA]

[+] EMBL AK103765             [CTCGCCTTCTCTTCCTCACCCCTCCTCTCATTTCAAGAAGAACAAGAGAAAGCTAAGAACATTTTCTAGCTCTCAAGTAGTACTCCTATATAATACCAAGAAGAGAAGCAGTAATAGTCTGGGGAGGCTTGAAGGGGGAGGAGAAGCATCAAATCGAAACAGACCAACAGAATCTGAAAAATTTACTAGTGGTAGAACAAGATTAGTCCTTTCCTCTTCCAAATAATAGTGGATTAGCTACTAGTTTATTAGTTCCTTTCTTCTACCAAGTAGTGGATTAGAGATTAGCTACTAGTTTGCACCTTGAAGAGTGATCTAGGATGGCACCGAGCTTTGATTTTGCGGCATCAATCCTCCTTTGCGCGGAGGACAACACCGCCATTCTTGATCTTGGCGAAGAGAGCGAGGAGATTTCTTGGGTTGTTGGGGTTGATGCTTCTCTAGGGGACTTGTCGATGGATTTCCCCTTGCAATCCGATGATTGCATCGAGGCCCTCCTGGGGAGGGAGGAGCAGCAGCACATCCCCATGGAGGGCTACCTCCAGCGGCTTCTGCTGCAGCCTGATGGGCTCGATTTGGTAGCCGTCAGGAGCGACGCCATTGACTGGATTTGGAAGGTACATGAGCTTTATAAGTTTGGGCCTTTGACTGCAGTCCTGTCGGTGAACTACCTGGACCGGTTCCTCTCCGTGTTCGATCTTCCTGTAAAGATCTTTCTCTGCATTGCATTGTTACTGTATTTCATACAAACTCGATTTTTTTATGCTTCTGAGATAAATGCCAAGTCATGGAGCAATTGCATTCTGAGTTTCAGCAAGAGGAGGCTTGTATGACACAACTCTTAGCAGTAGCTTCCTTGTCTTTGGCTGCAAAAATGGAGGAAACCGTTGTTCCACACCCCTTGGACTTGCAGGTGTGTGATGCAAAATATGTGTTTGAGACTAGGACCATAAAAAGGATGGAGCTTGCAGTGCTTAATGCCCTAAAGTGGAGGATGCAAGCTGTGACTGCTTGCTCATTTATCGATTATTACCTTCACAAGTTCAATGATGATGATACTCCGTCCACATCCGCACTCTCACGCTCAGTTGACCTCATCTTGAGTACATGTAAAGTTGCTGAATTCTTGGTTTTCAGACCATCAGAGATCGCGGCCAGTGTAGCTCTAGTAGCATTGGAGGAACATGAAACTTCCATGTTTGAGAGGGTGGCAACTTGTTACAAAAATTTAAAGAAGGAGAGGGT ATTACGGTGCTATGAAATGATTCAAGATAAG ATTATTATGAGAAACATTATGCGCCAATCAGCCGGCTCCGTTTTCTCCATTCCAAAAAGCCCCATAGGTGTATTGGATG CAGCTGCATGTATAAGCCAACAAAGTGAGGACACTTTTGTTGGATCACCTGCAACAAATTATGAGAGCTCGGCGTCAAGCAAAAGGAGGAGAATTTGCAGATGATTGTTTTCGTTGTACATTTGTAGCCTTCAAGTATGTTGCTCACCCA TTTGTTTTAATGGACCCAAGAACA TGGTCATTAGGACAGGTTTTTGTAGAGACGAGCAATCTCTTGTTATTTCGCATTCATGCTTCCATATTCATTTTTGAGAGAACCTTGGAGAATGGATATGCTTTGATGATTCTAAAGAAAATATAAAAACA                                ]
[+] EMBL BI805223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGGTGATTACGGTGCTATGAAATGATTCTAGATAAGTATTATTATGAGTAACATTATGCGCCAATCA CCGGCTCCGTTTTCTCCATTCCCAAAAGCCCCATAGGTGTATTGGATGTCAGCTGCATGTATAAGCCAACCAAGTGAGGACACTTTTGTTGGATCACCTGCTACCAATTATGAGAGCTCGGCGTCAAGC AAAGGAGGAGAATTTGCAGATGATTGTTTTCGTTGTACATTTGTAGCCTTCAAGTATGTTGCTCACCCACTTTGTTTTAATGGACCCCAGAACACTGGTCATTAGGACAGGTTTTTGTAGAGACGAGCCATCTCTTGTTATTTCGCATTCATGCTTCCATATTCATTTTTGAGAGAACCTTGGAGAATGGATATGCTTTGATGATTCTAAAGAAAATATAAAAACCGAGGAAAAGGAAACCATCTGAGAAAAAAAAAA]




>consensus_3007#0
CTCGCCTTCTCTTCCTCACCCCTCCTCTCATTTCAAGAAGAACAAGAGAAAGCTAAGAAC
ATTTTCTAGCTCTCAAGTAGTACTCCTATATAATACCAAGAAGAGAAGCAGTAATAGTCT
GGGGAGGCTTGAAGGGGGAGGAGAAGCATCAAATCGAAACAGACCAACAGAATCTGAAAA
ATTTACTAGTGGTAGAACAAGATTAGTCCTTTCCTCTTCCAAATAATAGTGGATTAGCTA
CTAGTTTATTAGTTCCTTTCTTCTACCAAGTAGTGGATTAGAGATTAGCTACTAGTTTGC
ACCTTGAAGAGTGATCTAGGATGGCACCGAGCTTTGATTTTGCGGCATCAATCCTCCTTT
GCGCGGAGGACAACACCGCCATTCTTGATCTTGGCGAAGAGAGCGAGGAGATTTCTTGGG
TTGTTGGGGTTGATGCTTCTCTAGGGGACTTGTCGATGGATTTCCCCTTGCAATCCGATG
ATTGCATCGAGGCCCTCCTGGGGAGGGAGGAGCAGCAGCACATCCCCATGGAGGGCTACC
TCCAGCGGCTTCTGCTGCAGCCTGATGGGCTCGATTTGGTAGCCGTCAGGAGCGACGCCA
TTGACTGGATTTGGAAGGTACATGAGCTTTATAAGTTTGGGCCTTTGACTGCAGTCCTGT
CGGTGAACTACCTGGACCGGTTCCTCTCCGTGTTCGATCTTCCTGTAAAGATCTTTCTCT
GCATTGCATTGTTACTGTATTTCATACAAACTCGATTTTTTTATGCTTCTGAGATAAATG
CCAAGTCATGGAGCAATTGCATTCTGAGTTTCAGCAAGAGGAGGCTTGTATGACACAACT
CTTAGCAGTAGCTTCCTTGTCTTTGGCTGCAAAAATGGAGGAAACCGTTGTTCCACACCC
CTTGGACTTGCAGGTGTGTGATGCAAAATATGTGTTTGAGACTAGGACCATAAAAAGGAT
GGAGCTTGCAGTGCTTAATGCCCTAAAGTGGAGGATGCAAGCTGTGACTGCTTGCTCATT
TATCGATTATTACCTTCACAAGTTCAATGATGATGATACTCCGTCCACATCCGCACTCTC
ACGCTCAGTTGACCTCATCTTGAGTACATGTAAAGTTGCTGAATTCTTGGTTTTCAGACC
ATCAGAGATCGCGGCCAGTGTAGCTCTAGTAGCATTGGAGGAACATGAAACTTCCATGTT
TGAGAGGGTGGCAACTTGTTACAAAAATTTAAAGAAGGAGAGGGTATTACGGTGCTATGA
AATGATTCAAGATAAGATTATTATGAGAAACATTATGCGCCAATCAGCCGGCTCCGTTTT
CTCCATTCCAAAAAGCCCCATAGGTGTATTGGATGCAGCTGCATGTATAAGCCAACAAAG
TGAGGACACTTTTGTTGGATCACCTGCAACAAATTATGAGAGCTCGGCGTCAAGCAAAAG
GAGGAGAATTTGCAGATGATTGTTTTCGTTGTACATTTGTAGCCTTCAAGTATGTTGCTC
ACCCATTTGTTTTAATGGACCCAAGAACATGGTCATTAGGACAGGTTTTTGTAGAGACGA
GCAATCTCTTGTTATTTCGCATTCATGCTTCCATATTCATTTTTGAGAGAACCTTGGAGA
ATGGATATGCTTTGATGATTCTAAAGAAAATATAAAAACAGAGGAAAAGGAAACCATCTG
AGAAAAAAAAAA
clustalw multiple alignements is not computed in this case