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Oryza sativa
cluster # 303 cluster # 303       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_303#0 length = 2968 sequences # 1  
 consensus_303#1 length = 1519 sequences # 1  
consensusID : consensus_303#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2968
fasta sequence 
                              [TTCTTCTCTCTCCCTCCTTCCTTCCTCTTGATCATCTAGTATAAATTGAGGAGGCTTGCTGGATCCATACAACAACAAAGACAGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAGGTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGCATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTGCGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGGCTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGACAAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGGAGGCTGCAGTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCATCTGGGAGTTCGTCAAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGGACTACCTCAAGAACAAAGAGGCCATGGTTGATGACAAATGGGGGGCTTACGATGACGACTCCCAGCTGGAAGTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCTCACGCTGCCCTCCTCCATCGGCAAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAAGCTGACCGACAACAAGAAGCCATTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGACAAGCTGATGATCAACGACATCCTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCTCGCCGAGGTTTACGTCGCCGGCCTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAAGTTTCAGGAGTGGGGACTGGAGAAAGGCTGGGGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCACCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTCATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGTGGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGAATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGCTAACAAGGCTCATACCAGAAGCAAAGGGCACCAAATGCAATGTAGAGTTGGAACCGATTGAAAACACAAAGCACTCCAACATCCTCCGTGTGCCATTCAAGACTGAGGATGGCAAAGTTCTTCCACAGTGGGTCTCCCGGTTTGACATCTATCCTTACCTGGAGAGATATGCCCAGGATTCTTCAGTCAAGATTCTCGAAATATTGGAGGGGAAACCAGACTTGGTCATTGGCAATTACACCGACGGTAATCTAGTAGCATCCCTCCTGACAAGCAAACTAGGAGTCACTCAGGGAACAATAGCGCATGCTCTAGAGAAGACGAAGTACGAGGATTCAGACATCAAGTGGAGAGAATTGGACCACAAGTACCATTTCTCATGCCAGTTTACTGCTGACATGATTGCCATGAACACTAGTGGCTTCATCATCGCTAGTACCTACCAAGAAATAGCTGGAAGCAAAGAGAAGCCTGGCCAGTATGAGAGTCACTATGCATTCACTATGCCAGGGCTCTGCCGCTATGCCACAGGCATCAACGTATTTGATCCCAAGTTCAACATTGCTGCACCAGGTGCAGATCAATCTGTTTACTTTCCCTTTACACAAAAGCAGAAGCGCCTGACTGACTTACACCCCCAAATTGAGGAGTTGCTCTATAGCAAAGAGGACAATAATGAGCATATAGGGCACCTAGCAGACAGGAGTAAGCCAATCATCTTTTCAATGGCAAGACTTGACAAGATAAAGAACATCACAGGGCTGGTCGAATGGTATGGTCAGAACAAGAGGCTCAGGGACCTTGTGAACCTTGTCATTGTTGGGGGCCTCCTGGACCCTTCACAGTCAAAGGACCGTGAGGAGATAGAGGAGATAAACAAGATGCACAGCCTGATAAACAAGTACCAGCTCGTGGGACAGATCCGTTGGATAAAAGGACAGACTGACCGAGTGCGCAATGGGGAACTTTACCGTTGCATCGCGGACACCAAGGGAGCCTTTGTTCAGCCTGCACTTTATGAAGCATTCGGACTAACAGTCATCGAGGCAATGAACTGCGGGCTGCCCACCTTTGCAACAAATCAAGGAGGACCTGCAGAGATCATTGTCGATGAGGTTTCGGGTTTCCATATCAACCCGCTCAATGGCAAGGAGGCAAGCGACAAGATTGCTGACTTCTTTCAGAAATGCAAGGAAGACCTCATCTACTGGAGCAAGATGTCCACCGCTGGACTCCAACGCATCTATGAGTGTTACACGTGGCAGATCTATGCAACCAAAGTTCTGAACATGGCATCAATATATGGCTTCTGGAGGACTCTAGACAAGGAAGAAAGACAAGCTAAACAGCACTACCTACACATGTTCTATAATCTTCAATTTAGGAAGTTGGCAAAGAATGTGCCAACACTGGGCGAACAACCAGCACAACCTACAGAGAGCGCAGAGCCTAATAGGATCATACCAAGACCCAAAGAAAGGCAAGTGTGCCCATTCTTACGAAATTTACTGAAGAAAGAGACAGGGAACAACTGACTGAAACATTTGTCGTTTGAGCGCTGCAGAAGGACGCAAATAAGGATCCAGAGGATTGCAACCAACTTACTTGGACCACTGCTCCCAGCCTCCAATTTCTCAACAGATGGAGCTTGAAGTAGAGACCAATCGTCAGAACTTTCTGAAGTTGTTGGAGTGAGAAATGTATTGTATAACATTGATTGTGAAGATTTAATAAATGATTACTGTGGGAATAATAAAAAGATTAACATACTTGGTAGCA]

[+] EMBL AK065549             [TTCTTCTCTCTCCCTCCTTCCTTCCTCTTGATCATCTAGTATAAATTGAGGAGGCTTGCTGGATCCATACAACAACAAAGACAGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAGGTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGCATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTGCGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGGCTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGACAAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGGAGGCTGCAGTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCATCTGGGAGTTCGTCAAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGGACTACCTCAAGAACAAAGAGGCCATGGTTGATGACAAATGGGGGGCTTACGATGACGACTCCCAGCTGGAAGTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCTCACGCTGCCCTCCTCCATCGGCAAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAAGCTGACCGACAACAAGAAGCCATTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGACAAGCTGATGATCAACGACATCCTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCTCGCCGAGGTTTACGTCGCCGGCCTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAAGTTTCAGGAGTGGGGACTGGAGAAAGGCTGGGGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCACCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTCATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGTGGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGAATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGCTAACAAGGCTCATACCAGAAGCAAAGGGCACCAAATGCAATGTAGAGTTGGAACCGATTGAAAACACAAAGCACTCCAACATCCTCCGTGTGCCATTCAAGACTGAGGATGGCAAAGTTCTTCCACAGTGGGTCTCCCGGTTTGACATCTATCCTTACCTGGAGAGATATGCCCAGGATTCTTCAGTCAAGATTCTCGAAATATTGGAGGGGAAACCAGACTTGGTCATTGGCAATTACACCGACGGTAATCTAGTAGCATCCCTCCTGACAAGCAAACTAGGAGTCACTCAGGGAACAATAGCGCATGCTCTAGAGAAGACGAAGTACGAGGATTCAGACATCAAGTGGAGAGAATTGGACCACAAGTACCATTTCTCATGCCAGTTTACTGCTGACATGATTGCCATGAACACTAGTGGCTTCATCATCGCTAGTACCTACCAAGAAATAGCTGGAAGCAAAGAGAAGCCTGGCCAGTATGAGAGTCACTATGCATTCACTATGCCAGGGCTCTGCCGCTATGCCACAGGCATCAACGTATTTGATCCCAAGTTCAACATTGCTGCACCAGGTGCAGATCAATCTGTTTACTTTCCCTTTACACAAAAGCAGAAGCGCCTGACTGACTTACACCCCCAAATTGAGGAGTTGCTCTATAGCAAAGAGGACAATAATGAGCATATAGGGCACCTAGCAGACAGGAGTAAGCCAATCATCTTTTCAATGGCAAGACTTGACAAGATAAAGAACATCACAGGGCTGGTCGAATGGTATGGTCAGAACAAGAGGCTCAGGGACCTTGTGAACCTTGTCATTGTTGGGGGCCTCCTGGACCCTTCACAGTCAAAGGACCGTGAGGAGATAGAGGAGATAAACAAGATGCACAGCCTGATAAACAAGTACCAGCTCGTGGGACAGATCCGTTGGATAAAAGGACAGACTGACCGAGTGCGCAATGGGGAACTTTACCGTTGCATCGCGGACACCAAGGGAGCCTTTGTTCAGCCTGCACTTTATGAAGCATTCGGACTAACAGTCATCGAGGCAATGAACTGCGGGCTGCCCACCTTTGCAACAAATCAAGGAGGACCTGCAGAGATCATTGTCGATGAGGTTTCGGGTTTCCATATCAACCCGCTCAATGGCAAGGAGGCAAGCGACAAGATTGCTGACTTCTTTCAGAAATGCAAGGAAGACCTCATCTACTGGAGCAAGATGTCCACCGCTGGACTCCAACGCATCTATGAGTGTTACACGTGGCAGATCTATGCAACCAAAGTTCTGAACATGGCATCAATATATGGCTTCTGGAGGACTCTAGACAAGGAAGAAAGACAAGCTAAACAGCACTACCTACACATGTTCTATAATCTTCAATTTAGGAAGTTGGCAAAGAATGTGCCAACACTGGGCGAACAACCAGCACAACCTACAGAGAGCGCAGAGCCTAATAGGATCATACCAAGACCCAAAGAAAGGCAAGTGTGCCCATTCTTACGAAATTTACTGAAGAAAGAGACAGGGAACAACTGACTGAAACATTTGTCGTTTGAGCGCTGCAGAAGGACGCAAATAAGGATCCAGAGGATTGCAACCAACTTACTTGGACCACTGCTCCCAGCCTCCAATTTCTCAACAGATGGAGCTTGAAGTAGAGACCAATCGTCAGAACTTTCTGAAGTTGTTGGAGTGAGAAATGTATTGTATAACATTGATTGTGAAGATTTAATAAATGATTACTGTGGGAATAATAAAAAGATTAACATACTTGGTAGCA]




>consensus_303#0
TTCTTCTCTCTCCCTCCTTCCTTCCTCTTGATCATCTAGTATAAATTGAGGAGGCTTGCT
GGATCCATACAACAACAAAGACAGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAG
GTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGC
ATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTG
CGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGG
CTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGAC
AAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGGAGGCTGCA
GTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCATCTGGGAGTTCGTC
AAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGGACTACCTCAAGAAC
AAAGAGGCCATGGTTGATGACAAATGGGGGGCTTACGATGACGACTCCCAGCTGGAAGTC
GATTTTGGCGCCCTGGACCTGTCGACGCCTCACCTCACGCTGCCCTCCTCCATCGGCAAA
GGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAAGCTGACCGACAACAAGAAGCCATTG
CTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGACAAGCTGATGATCAACGACATCCTT
GACACCGTCGACAAGCTTCAGACAGCACTGCTTCTCGCCGAGGTTTACGTCGCCGGCCTG
CATCCCGACACAAACTACTCCGAATTTGAGCAGAAGTTTCAGGAGTGGGGACTGGAGAAA
GGCTGGGGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTC
CAAGCACCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACC
GTTGTCATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGAC
ACCGGTGGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTG
CAAAGAATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGCTAACAAGGCTC
ATACCAGAAGCAAAGGGCACCAAATGCAATGTAGAGTTGGAACCGATTGAAAACACAAAG
CACTCCAACATCCTCCGTGTGCCATTCAAGACTGAGGATGGCAAAGTTCTTCCACAGTGG
GTCTCCCGGTTTGACATCTATCCTTACCTGGAGAGATATGCCCAGGATTCTTCAGTCAAG
ATTCTCGAAATATTGGAGGGGAAACCAGACTTGGTCATTGGCAATTACACCGACGGTAAT
CTAGTAGCATCCCTCCTGACAAGCAAACTAGGAGTCACTCAGGGAACAATAGCGCATGCT
CTAGAGAAGACGAAGTACGAGGATTCAGACATCAAGTGGAGAGAATTGGACCACAAGTAC
CATTTCTCATGCCAGTTTACTGCTGACATGATTGCCATGAACACTAGTGGCTTCATCATC
GCTAGTACCTACCAAGAAATAGCTGGAAGCAAAGAGAAGCCTGGCCAGTATGAGAGTCAC
TATGCATTCACTATGCCAGGGCTCTGCCGCTATGCCACAGGCATCAACGTATTTGATCCC
AAGTTCAACATTGCTGCACCAGGTGCAGATCAATCTGTTTACTTTCCCTTTACACAAAAG
CAGAAGCGCCTGACTGACTTACACCCCCAAATTGAGGAGTTGCTCTATAGCAAAGAGGAC
AATAATGAGCATATAGGGCACCTAGCAGACAGGAGTAAGCCAATCATCTTTTCAATGGCA
AGACTTGACAAGATAAAGAACATCACAGGGCTGGTCGAATGGTATGGTCAGAACAAGAGG
CTCAGGGACCTTGTGAACCTTGTCATTGTTGGGGGCCTCCTGGACCCTTCACAGTCAAAG
GACCGTGAGGAGATAGAGGAGATAAACAAGATGCACAGCCTGATAAACAAGTACCAGCTC
GTGGGACAGATCCGTTGGATAAAAGGACAGACTGACCGAGTGCGCAATGGGGAACTTTAC
CGTTGCATCGCGGACACCAAGGGAGCCTTTGTTCAGCCTGCACTTTATGAAGCATTCGGA
CTAACAGTCATCGAGGCAATGAACTGCGGGCTGCCCACCTTTGCAACAAATCAAGGAGGA
CCTGCAGAGATCATTGTCGATGAGGTTTCGGGTTTCCATATCAACCCGCTCAATGGCAAG
GAGGCAAGCGACAAGATTGCTGACTTCTTTCAGAAATGCAAGGAAGACCTCATCTACTGG
AGCAAGATGTCCACCGCTGGACTCCAACGCATCTATGAGTGTTACACGTGGCAGATCTAT
GCAACCAAAGTTCTGAACATGGCATCAATATATGGCTTCTGGAGGACTCTAGACAAGGAA
GAAAGACAAGCTAAACAGCACTACCTACACATGTTCTATAATCTTCAATTTAGGAAGTTG
GCAAAGAATGTGCCAACACTGGGCGAACAACCAGCACAACCTACAGAGAGCGCAGAGCCT
AATAGGATCATACCAAGACCCAAAGAAAGGCAAGTGTGCCCATTCTTACGAAATTTACTG
AAGAAAGAGACAGGGAACAACTGACTGAAACATTTGTCGTTTGAGCGCTGCAGAAGGACG
CAAATAAGGATCCAGAGGATTGCAACCAACTTACTTGGACCACTGCTCCCAGCCTCCAAT
TTCTCAACAGATGGAGCTTGAAGTAGAGACCAATCGTCAGAACTTTCTGAAGTTGTTGGA
GTGAGAAATGTATTGTATAACATTGATTGTGAAGATTTAATAAATGATTACTGTGGGAAT
AATAAAAAGATTAACATACTTGGTAGCA

consensusID : consensus_303#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1519
fasta sequence 
                              [AGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAGGTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGCATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTGCGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGGCTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGACAAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGGTAGGAGAATTACTTACTTTCCTAGGTACATGCGCATCTCTCTGTCAATCCAACATCATCCATGGGCCATGCAGGAGGCTGCAGTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCATCTGGGAGTTCGTCAAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGGACTACCTCAAGAACAAAGAGGCCCTGGTTGATGACAAATGGTTAGTCAATTAAATATTCACATTTGCTTTCCGTGTAGCTATTACTATTGCTATTTAATCAACATCCTTTTTTGCTTTATAATCTCATAATCTGGTTGGTTATATCTAAATTAATTAATTGGCTGGGTCAGGGGGGCTTACGATGACGACTCCCAGCTGGAAGTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCTCACGCTGCCCTCCTCCATCGGCAAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAAGCTGACCGACAACAAGAAGCCATTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGACAAGCTGATGATCAACGACATCCTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCTCGCCGAGGTTTACGTCGCCGGCCTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAAGTACATGCTGTATTACCATACCTGGTCAACTACCAAAAGCATGCAACACGAATACATGATCCAATATATATTTGTAATGCATCATGCAGGTTTCAGGAGTGGGGACTGGAGAAAGGCTGGGGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCACCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTCATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGTGGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGAATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGGTAATTTAAGTTTTCAACTAACAATTGCATGCATACCTGGGCCATCCATATCTATTATATTATTAAGACAGCTCGAAAAGGAGGCACCACGTTCGCTGTGGAGGCTAGAAATTCCCATA]

[+] EMBL AK061268             [AGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAGGTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGCATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTGCGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGGCTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGACAAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGGTAGGAGAATTACTTACTTTCCTAGGTACATGCGCATCTCTCTGTCAATCCAACATCATCCATGGGCCATGCAGGAGGCTGCAGTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCATCTGGGAGTTCGTCAAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGGACTACCTCAAGAACAAAGAGGCCCTGGTTGATGACAAATGGTTAGTCAATTAAATATTCACATTTGCTTTCCGTGTAGCTATTACTATTGCTATTTAATCAACATCCTTTTTTGCTTTATAATCTCATAATCTGGTTGGTTATATCTAAATTAATTAATTGGCTGGGTCAGGGGGGCTTACGATGACGACTCCCAGCTGGAAGTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCTCACGCTGCCCTCCTCCATCGGCAAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAAGCTGACCGACAACAAGAAGCCATTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGACAAGCTGATGATCAACGACATCCTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCTCGCCGAGGTTTACGTCGCCGGCCTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAAGTACATGCTGTATTACCATACCTGGTCAACTACCAAAAGCATGCAACACGAATACATGATCCAATATATATTTGTAATGCATCATGCAGGTTTCAGGAGTGGGGACTGGAGAAAGGCTGGGGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCACCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTCATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGTGGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGAATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGGTAATTTAAGTTTTCAACTAACAATTGCATGCATACCTGGGCCATCCATATCTATTATATTATTAAGACAGCTCGAAAAGGAGGCACCACGTTCGCTGTGGAGGCTAGAAATTCCCATA]




>consensus_303#1
AGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAGGTAGGGCATTCCTCCCTCCTCA
AGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGCATAATGGCCGTCGGGTTGAGGA
GATCGGACAGCATTGCCGACATGATGCCGGAGGCACTGCGGCAGAGCCGGTACCAGATGA
AGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGGCTCATGAAGAGGCAGCAGCTCT
TGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGACAAGGACCAGCTCCTCCAGGGCT
TCCTTGGCTACGTCATATCCTCCACACAGGTAGGAGAATTACTTACTTTCCTAGGTACAT
GCGCATCTCTCTGTCAATCCAACATCATCCATGGGCCATGCAGGAGGCTGCAGTGCTCCC
CCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCATCTGGGAGTTCGTCAAGGTCCA
TTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGGACTACCTCAAGAACAAAGAGGC
CCTGGTTGATGACAAATGGTTAGTCAATTAAATATTCACATTTGCTTTCCGTGTAGCTAT
TACTATTGCTATTTAATCAACATCCTTTTTTGCTTTATAATCTCATAATCTGGTTGGTTA
TATCTAAATTAATTAATTGGCTGGGTCAGGGGGGCTTACGATGACGACTCCCAGCTGGAA
GTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCTCACGCTGCCCTCCTCCATCGGC
AAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAAGCTGACCGACAACAAGAAGCCA
TTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGACAAGCTGATGATCAACGACATC
CTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCTCGCCGAGGTTTACGTCGCCGGC
CTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAAGTACATGCTGTATTACCATACC
TGGTCAACTACCAAAAGCATGCAACACGAATACATGATCCAATATATATTTGTAATGCAT
CATGCAGGTTTCAGGAGTGGGGACTGGAGAAAGGCTGGGGTGACACTGCTGAAACATGCA
AAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCACCGGATCCCATCAACATGGAAA
AGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTCATCTTCTCCATCCATGGTTACT
TTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGTGGTCAGGTTGTCTACATCCTGG
ACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGAATCAAGCAGCAGGGCCTGAATG
CCACACCTAAGATTCTCGTGGTAATTTAAGTTTTCAACTAACAATTGCATGCATACCTGG
GCCATCCATATCTATTATATTATTAAGACAGCTCGAAAAGGAGGCACCACGTTCGCTGTG
GAGGCTAGAAATTCCCATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_303#0      TTCTTCTCTCTCCCTCCTTCCTTCCTCTTGATCATCTAGTATAAATTGAGGAGGCTTGCT 60
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GGATCCATACAACAACAAAGACAGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAG 120
consensus_303#1      ----------------------AGTAGTATCATATAACAGCAAGCAAATAAGAAAGCTAG 38
                                           **************************************

consensus_303#0      GTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGC 180
consensus_303#1      GTAGGGCATTCCTCCCTCCTCAAGTAGAGAAGAGCTACAGCTGCAGCTGCAGAGGGGGGC 98
                     ************************************************************

consensus_303#0      ATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTG 240
consensus_303#1      ATAATGGCCGTCGGGTTGAGGAGATCGGACAGCATTGCCGACATGATGCCGGAGGCACTG 158
                     ************************************************************

consensus_303#0      CGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGG 300
consensus_303#1      CGGCAGAGCCGGTACCAGATGAAGAGGTGCTTCCAGAGGTACGTGTCCCAGGGTAAGAGG 218
                     ************************************************************

consensus_303#0      CTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGAC 360
consensus_303#1      CTCATGAAGAGGCAGCAGCTCTTGGACGAGCTCGACAAATCCGTCGATGATAAGGCCGAC 278
                     ************************************************************

consensus_303#0      AAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGG-------- 412
consensus_303#1      AAGGACCAGCTCCTCCAGGGCTTCCTTGGCTACGTCATATCCTCCACACAGGTAGGAGAA 338
                     ****************************************************        

consensus_303#0      ------------------------------------------------------------
consensus_303#1      TTACTTACTTTCCTAGGTACATGCGCATCTCTCTGTCAATCCAACATCATCCATGGGCCA 398
                                                                                 

consensus_303#0      ------AGGCTGCAGTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCA 466
consensus_303#1      TGCAGGAGGCTGCAGTGCTCCCCCCATTCGTCGCATTCGCTGTCAGGATGAACCCTGGCA 458
                           ******************************************************

consensus_303#0      TCTGGGAGTTCGTCAAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGG 526
consensus_303#1      TCTGGGAGTTCGTCAAGGTCCATTCCGCAAATCTGTCCGTCGAGCAGATGACACCGTCGG 518
                     ************************************************************

consensus_303#0      ACTACCTCAAGAACAAAGAGGCCATGGTTGATGACAAATGG------------------- 567
consensus_303#1      ACTACCTCAAGAACAAAGAGGCCCTGGTTGATGACAAATGGTTAGTCAATTAAATATTCA 578
                     *********************** *****************                   

consensus_303#0      ------------------------------------------------------------
consensus_303#1      CATTTGCTTTCCGTGTAGCTATTACTATTGCTATTTAATCAACATCCTTTTTTGCTTTAT 638
                                                                                 

consensus_303#0      ----------------------------------------------------GGGGCTTA 575
consensus_303#1      AATCTCATAATCTGGTTGGTTATATCTAAATTAATTAATTGGCTGGGTCAGGGGGGCTTA 698
                                                                         ********

consensus_303#0      CGATGACGACTCCCAGCTGGAAGTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCT 635
consensus_303#1      CGATGACGACTCCCAGCTGGAAGTCGATTTTGGCGCCCTGGACCTGTCGACGCCTCACCT 758
                     ************************************************************

consensus_303#0      CACGCTGCCCTCCTCCATCGGCAAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAA 695
consensus_303#1      CACGCTGCCCTCCTCCATCGGCAAAGGCGCGCACTTGGTCTCCAGATTCATGTCTTCCAA 818
                     ************************************************************

consensus_303#0      GCTGACCGACAACAAGAAGCCATTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGA 755
consensus_303#1      GCTGACCGACAACAAGAAGCCATTGCTGGACTACCTGCTGGCGCTCAGCCACCGCGGCGA 878
                     ************************************************************

consensus_303#0      CAAGCTGATGATCAACGACATCCTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCT 815
consensus_303#1      CAAGCTGATGATCAACGACATCCTTGACACCGTCGACAAGCTTCAGACAGCACTGCTTCT 938
                     ************************************************************

consensus_303#0      CGCCGAGGTTTACGTCGCCGGCCTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAA 875
consensus_303#1      CGCCGAGGTTTACGTCGCCGGCCTGCATCCCGACACAAACTACTCCGAATTTGAGCAGAA 998
                     ************************************************************

consensus_303#0      GT---------------------------------------------------------- 877
consensus_303#1      GTACATGCTGTATTACCATACCTGGTCAACTACCAAAAGCATGCAACACGAATACATGAT 1058
                     **                                                          

consensus_303#0      -------------------------------TTCAGGAGTGGGGACTGGAGAAAGGCTGG 906
consensus_303#1      CCAATATATATTTGTAATGCATCATGCAGGTTTCAGGAGTGGGGACTGGAGAAAGGCTGG 1118
                                                    *****************************

consensus_303#0      GGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCA 966
consensus_303#1      GGTGACACTGCTGAAACATGCAAAGAAACACTAAGCAGTCTCTCGGAGGTGCTCCAAGCA 1178
                     ************************************************************

consensus_303#0      CCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTC 1026
consensus_303#1      CCGGATCCCATCAACATGGAAAAGTTCTTCAGTACGGTGCCCTGCGTGTTCACCGTTGTC 1238
                     ************************************************************

consensus_303#0      ATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGT 1086
consensus_303#1      ATCTTCTCCATCCATGGTTACTTTGGCCAGGAGAAGGTCCTCGGTATGCCAGACACCGGT 1298
                     ************************************************************

consensus_303#0      GGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGA 1146
consensus_303#1      GGTCAGGTTGTCTACATCCTGGACCAAGTTAGAGCTCTGGAAGACGAACTGCTGCAAAGA 1358
                     ************************************************************

consensus_303#0      ATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGCTAAC--AAGGCTCATAC 1204
consensus_303#1      ATCAAGCAGCAGGGCCTGAATGCCACACCTAAGATTCTCGTGGTAATTTAAGTTTTCAAC 1418
                     ****************************************** ***   ***  *   **

consensus_303#0      CAGAAGCAAAGGGCAC-CAAATGCAATGTAGAGTTGGAACCGATTGAAAACACAAAGC-A 1262
consensus_303#1      TAACAATTGCATGCATACCTGGGCCATCCATATCTATTAT--ATTATTAAGACAGCTCGA 1476
                      *  *       ***  *    ** **  * *  *   *   ***   ** ***   * *

consensus_303#0      CTCCAACATCCTCCGTGTGCCATTCAAGACTGAGGATGGCAAAGTTCTTCCACAGTGGGT 1322
consensus_303#1      AAAGGAGGCACCACGTTCGCTGTGGAGGCTAGAAATTCCCATA----------------- 1519
                          *    *  ***  **  *  * *   **   *  ** *                 

consensus_303#0      CTCCCGGTTTGACATCTATCCTTACCTGGAGAGATATGCCCAGGATTCTTCAGTCAAGAT 1382
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TCTCGAAATATTGGAGGGGAAACCAGACTTGGTCATTGGCAATTACACCGACGGTAATCT 1442
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AGTAGCATCCCTCCTGACAAGCAAACTAGGAGTCACTCAGGGAACAATAGCGCATGCTCT 1502
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AGAGAAGACGAAGTACGAGGATTCAGACATCAAGTGGAGAGAATTGGACCACAAGTACCA 1562
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TTTCTCATGCCAGTTTACTGCTGACATGATTGCCATGAACACTAGTGGCTTCATCATCGC 1622
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TAGTACCTACCAAGAAATAGCTGGAAGCAAAGAGAAGCCTGGCCAGTATGAGAGTCACTA 1682
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TGCATTCACTATGCCAGGGCTCTGCCGCTATGCCACAGGCATCAACGTATTTGATCCCAA 1742
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GTTCAACATTGCTGCACCAGGTGCAGATCAATCTGTTTACTTTCCCTTTACACAAAAGCA 1802
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GAAGCGCCTGACTGACTTACACCCCCAAATTGAGGAGTTGCTCTATAGCAAAGAGGACAA 1862
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TAATGAGCATATAGGGCACCTAGCAGACAGGAGTAAGCCAATCATCTTTTCAATGGCAAG 1922
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      ACTTGACAAGATAAAGAACATCACAGGGCTGGTCGAATGGTATGGTCAGAACAAGAGGCT 1982
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      CAGGGACCTTGTGAACCTTGTCATTGTTGGGGGCCTCCTGGACCCTTCACAGTCAAAGGA 2042
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      CCGTGAGGAGATAGAGGAGATAAACAAGATGCACAGCCTGATAAACAAGTACCAGCTCGT 2102
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GGGACAGATCCGTTGGATAAAAGGACAGACTGACCGAGTGCGCAATGGGGAACTTTACCG 2162
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TTGCATCGCGGACACCAAGGGAGCCTTTGTTCAGCCTGCACTTTATGAAGCATTCGGACT 2222
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AACAGTCATCGAGGCAATGAACTGCGGGCTGCCCACCTTTGCAACAAATCAAGGAGGACC 2282
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TGCAGAGATCATTGTCGATGAGGTTTCGGGTTTCCATATCAACCCGCTCAATGGCAAGGA 2342
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GGCAAGCGACAAGATTGCTGACTTCTTTCAGAAATGCAAGGAAGACCTCATCTACTGGAG 2402
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      CAAGATGTCCACCGCTGGACTCCAACGCATCTATGAGTGTTACACGTGGCAGATCTATGC 2462
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AACCAAAGTTCTGAACATGGCATCAATATATGGCTTCTGGAGGACTCTAGACAAGGAAGA 2522
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AAGACAAGCTAAACAGCACTACCTACACATGTTCTATAATCTTCAATTTAGGAAGTTGGC 2582
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AAAGAATGTGCCAACACTGGGCGAACAACCAGCACAACCTACAGAGAGCGCAGAGCCTAA 2642
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TAGGATCATACCAAGACCCAAAGAAAGGCAAGTGTGCCCATTCTTACGAAATTTACTGAA 2702
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GAAAGAGACAGGGAACAACTGACTGAAACATTTGTCGTTTGAGCGCTGCAGAAGGACGCA 2762
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      AATAAGGATCCAGAGGATTGCAACCAACTTACTTGGACCACTGCTCCCAGCCTCCAATTT 2822
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      CTCAACAGATGGAGCTTGAAGTAGAGACCAATCGTCAGAACTTTCTGAAGTTGTTGGAGT 2882
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      GAGAAATGTATTGTATAACATTGATTGTGAAGATTTAATAAATGATTACTGTGGGAATAA 2942
consensus_303#1      ------------------------------------------------------------
                                                                                 

consensus_303#0      TAAAAAGATTAACATACTTGGTAGCA 2968
consensus_303#1      --------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)