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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3072 cluster # 3072       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3072#0 length = 978 sequences # 2  

consensusID : consensus_3072#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 978
fasta sequence
                              [AGATAGGAAATTTGTGCATGCAATGCAATGCAATGCACGTACCCCTTTGATTTGATTTGATTTGATTGAATTAATTTGAGTCCGATCTGATCCGTGCATGCATGTATATTCAATATATAATTCATCTGCCGGATTAATTGCAATGAATTGAATTGAAGATCGATCAAGATCAATAGTAATCGATGGGAGGAATGGATTGCTCAATGACAAGCAGCATATTGTCGGCGAATTACAACACCATCCTGTTCGAGTTCGGCGTGATCCTGGTGACCAGCCTGTTCGAGTCGTCCAAGAGTAGCCGCCGTGCGGGGGCGTCGTCCTCCTCCTCGGCGTCGTCAGTGCTGGGGCAGGAGGAGGTGCAGGCGCAGGTGGACGACAAGTTCTTCGCGGAGTTCTACCGGAAGCACGTGGCCGGCAGCAAGGCCATCGGGTACATGGAGAAGCACGTCGGCGACGGGACGGAGCTGGTGGCGGTGCTGCGGGCGCTGCAGGCGGAGTACCGTCTGTTCGTCGTCGGCCGGGGCCGCGACCGCCGGTCTGTGCTGACGGAGGGTTTGGAGGAGTGGGCGGAGTGCCTTGAGCTGGGCCCCGTCGGCGACATCCTCGCCTCCTCCGATTTCTCCTCCACCGCCTCCGTCCTCATCGTCCAGCAGTACGACGCCAAGAAGCACTACAAGGTCATCGACGAGGAGTTCATGCCTTTGTAATTCTTTCCCATATACTCCTTCTATTTTCATTACCCCTACCTCCCTCTTCCTCTTCATTAGCTTATTACTAATTGCAACCCATATACTTACCTAACTTACATTTATATATGCCTGTTTTTGGAGGAGTAAATGTAATTAGAAGATTAAATACTTCCAGTTAAGCAAACCTAGCTCGATCCCTTGTATACATACAAAAGAGTCGTACATATGTCATACCTAGAGAAGGTGGCAAAGTTCATCATTTTCAAGTTTGAATAGAGGGCCTTAATTC]

[+] EMBL AK070701             [AGATAGGAAATTTGTGCATGCAATGCAATGCAATGCACGTACCCCTTTGATTTGATTTGATTTGATTGAATTAATTTGAGTCCGATCTGATCCGTGCATGCATGTATATTCAATATATAATTCATCTGCCGGATTAATTGCAATGAATTGAATTGAAGATCGATCAAGATCAATAGTAATCGATGGGAGGAATGGATTGCTCAATGACAAGCAGCATATTGTCGGCGAATTACAACACCATCCTGTTCGAGTTCGGCGTGATCCTGGTGACCAGCCTGTTCGAGTCGTCCAAGAGTAGCCGCCGTGCGGGGGCGTCGTCCTCCTCCTCGGCGTCGTCAGTGCTGGGGCAGGAGGAGGTGCAGGCGCAGGTGGACGACAAGTTCTTCGCGGAGTTCTACCGGAAGCACGTGGCCGGCAGCAAGGCCATCGGGTACATGGAGAAGCACGTCGGCGACGGGACGGAGCTGGTGGCGGTGCTGCGGGCGCTGCAGGCGGAGTACCGTCTGTTCGTCGTCGGCCGGGGCCGCGACCGCCGGTCTGTGCTGACGGAGGGTTTGGAGGAGTGGGCGGAGTGCCTTGAGCTGGGCCCCGTCGGCGACATCCTCGCCTCCTCCGATTTCTCCTCCACCGCCTCCGTCCTCATCGTCCAGCAGTACGACGCCAAGAAGCACTACAAGGTCATCGACGAGGAGTTCATGCCTTTGTAATTCTTTCCCATATACTCCTTCTATTTTCATTACCCCTACCTCCCTCTTCCTCTTCATTAGCTTATTACTAATTGCAACCCATATACTTACCTAACTTACATTTATATATGCCTGTTTTTGGAGGAGTAAATGTAATTAGAAGATTAAATACTTCCAGTTAAGCAAACCTAGCTCGATCCCTTGTATACATACAAAAGAGTCGTACATATGTCATACCTAGAGAAGGTGGCAAAGTTCATCATTTTCAAGTTTGAATAGAGGGCCTTAATTC]
[+] EMBL AU082928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTCGTCGGCCGGGGCCGCGACCGCCGGTCTGTGCTGACGGAGGGTTTGGAGGAGTGGGCGGAGTGCCTTGAGCTGGGCCCCGTCGGCGACATCCTCGCCTCCTCCGATTTCTCCTCCACCGCCTCCGTCCTCATCGTCCAGCAGTACGACGCCAAGAAGCACTACAAGGTCATCGACGAGGAGTTCATGCCTTTGTAATTCTTTCCCATATACTCCTTCTATTTTCATTACCCCTACCTCCCTCTTCCTCTTCATTAGCTTATTACTAATTGCAACCCATATACTTACCTAACTTACATTTATATATGCCTGTTTTTGGAGGAGTAAATGTAATTAGAAGATTAAATACTTCCAGTTAAGCAAAaa                                                                                                       ]


>consensus_3072#0 AGATAGGAAATTTGTGCATGCAATGCAATGCAATGCACGTACCCCTTTGATTTGATTTGA TTTGATTGAATTAATTTGAGTCCGATCTGATCCGTGCATGCATGTATATTCAATATATAA TTCATCTGCCGGATTAATTGCAATGAATTGAATTGAAGATCGATCAAGATCAATAGTAAT CGATGGGAGGAATGGATTGCTCAATGACAAGCAGCATATTGTCGGCGAATTACAACACCA TCCTGTTCGAGTTCGGCGTGATCCTGGTGACCAGCCTGTTCGAGTCGTCCAAGAGTAGCC GCCGTGCGGGGGCGTCGTCCTCCTCCTCGGCGTCGTCAGTGCTGGGGCAGGAGGAGGTGC AGGCGCAGGTGGACGACAAGTTCTTCGCGGAGTTCTACCGGAAGCACGTGGCCGGCAGCA AGGCCATCGGGTACATGGAGAAGCACGTCGGCGACGGGACGGAGCTGGTGGCGGTGCTGC GGGCGCTGCAGGCGGAGTACCGTCTGTTCGTCGTCGGCCGGGGCCGCGACCGCCGGTCTG TGCTGACGGAGGGTTTGGAGGAGTGGGCGGAGTGCCTTGAGCTGGGCCCCGTCGGCGACA TCCTCGCCTCCTCCGATTTCTCCTCCACCGCCTCCGTCCTCATCGTCCAGCAGTACGACG CCAAGAAGCACTACAAGGTCATCGACGAGGAGTTCATGCCTTTGTAATTCTTTCCCATAT ACTCCTTCTATTTTCATTACCCCTACCTCCCTCTTCCTCTTCATTAGCTTATTACTAATT GCAACCCATATACTTACCTAACTTACATTTATATATGCCTGTTTTTGGAGGAGTAAATGT AATTAGAAGATTAAATACTTCCAGTTAAGCAAACCTAGCTCGATCCCTTGTATACATACA AAAGAGTCGTACATATGTCATACCTAGAGAAGGTGGCAAAGTTCATCATTTTCAAGTTTG AATAGAGGGCCTTAATTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)