cluster # 3175

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Oryza sativa
cluster # 3175 cluster # 3175 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3175#0 length = 505 sequences # 2

consensusID : consensus_3175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 505
fasta sequence

                              [GGCCACCGCCGCATCCACCTCCGCCGCCGCCGTCGCCGCCGCATCGCGCCTCCTCGTCCGCCGCGCGCCGCCG-GCCTGCTGCGCCGGTTACCCCGCGCGGCGCTCGCCCCTTCTCGCCCGTCGCCGCCGTCGTCGTCGTCGTACGGTGCAGCAGCCGTCGCCCTCGGCCGGCAGCCGCTCGGCCACCGCGCTAGGATGGGACACACCGCCGCCGCCGCCGACGCCGC-GGCCCCGCGCTCGGGCTCACCAAGCCCAACGCCGTCGAGCCGCCGCA-GTTTCATTTGCTGCTAAAGACGTCGAATTCTCCGAATGGAAGGGAGACATCCTCGCAATCGCAGTGACAGANAATGATCTNGTCAAAGGATCAGACTCCAAATTTCGAGAATGCGGTGTTGAAGAAGCTCGACGGCCAGCTCGGCGGCCTCCTGTCGGAGGCATCGGCGGAGGAGGATTTCACCGGCAAAGCCGGGCAATCAGTGGTGCTCCGCCTCCCGGGGCAGGGTTT]

[+] EMBL AU166076             [GGCCACCGCCGCATCCACCTCCGCCGCCGCCGTCGCCGCCGCATCGCGCCTCCTCGTCCGCCGCGCGCCGCCG GCCTGCTGCGCCGGTTACCCCGCGCGGCGCTCGCCCCTTCTCGCCCGTCGCCGCCGTCGTCGTCGTCGTACGGTGCAGCAGCCGTCGCCCTCGGCCGGCAGCCGCTCGGCCACCGCGCTAGGATGGGACACACCGCCGCCGCCGCCGACGCCGC GGCCCCGCGCTCGGGCTCACCAAGCCCAACGCCGTCGAGCCGCCGCA GTTTCATTTGCTGCTAAAGACGTCGAATTCTCCGAATGGAAGGGAGACATCCTCGCAATCGCAGTGACAGANAATGATCTNGTCAAAGGATCAGACTCCAAATTTCGAGAATGCGGTGTTGA                                                                                                             ]
[+] EMBL CB645132             [                ACCTCCTTCAACGCCGTCGCCGCCGCATCGCGCCTCCTCGTCCGCCGCGCGCCGCCGCGCCTGCTGCGCCGGTTACCCCGCGCGGCGCTCGCCGCCTCTCGCCCGTCGCCGCCGTCGTCGTCGTCGTACGGTGCAGCAGCCGTCGCCCTCGGCCGGCAGCCGCTCGGCCACCGCGCTAGGATGGGACACACCGCCGCCGCCGCCGCCGCCGCGGGCCCCGCGCTCGGGCTCACCAAGCCCAACGCCGTCGAGCCGCCGCAGGTTTCATTTGCTGCTAAAGACGTCGAATTCTCCGAATGGAAGGGAGACATCCTCGCAATCGCAGTGACAGAGAATGATCTGGTCAAAGGATCAGACTCCAAA TTCGAGAATGCGGTGTTGAAGAAGCTCGACGGCCAGCTCGGCGGCCTCCTGTCGGAGGCATCGGCGGAGGAGGATTTCACCGGCAAAGCCGGGCAATCAGTGGTGCTCCGCCTCCCGGGGCAGGGTTT]




>consensus_3175#0
GGCCACCGCCGCATCCACCTCCGCCGCCGCCGTCGCCGCCGCATCGCGCCTCCTCGTCCG
CCGCGCGCCGCCGGCCTGCTGCGCCGGTTACCCCGCGCGGCGCTCGCCCCTTCTCGCCCG
TCGCCGCCGTCGTCGTCGTCGTACGGTGCAGCAGCCGTCGCCCTCGGCCGGCAGCCGCTC
GGCCACCGCGCTAGGATGGGACACACCGCCGCCGCCGCCGACGCCGCGGCCCCGCGCTCG
GGCTCACCAAGCCCAACGCCGTCGAGCCGCCGCAGTTTCATTTGCTGCTAAAGACGTCGA
ATTCTCCGAATGGAAGGGAGACATCCTCGCAATCGCAGTGACAGANAATGATCTNGTCAA
AGGATCAGACTCCAAATTTCGAGAATGCGGTGTTGAAGAAGCTCGACGGCCAGCTCGGCG
GCCTCCTGTCGGAGGCATCGGCGGAGGAGGATTTCACCGGCAAAGCCGGGCAATCAGTGG
TGCTCCGCCTCCCGGGGCAGGGTTT

clustalw multiple alignements is not computed in this case