cluster # 3198

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Oryza sativa
cluster # 3198 cluster # 3198 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3198#0 length = 652 sequences # 2

consensusID : consensus_3198#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 652
fasta sequence

                              [TCCGCCGCAAGATTGGTGGGCAGGAGCATGACCGCGAGCGCTGATCGAGCGAGATAGAGATCGAGTCCGCGACTCCGCAACGGNGTCTCTGCCCTCCGCGCCATGACCGCNATGGCGCGACTGCTCTGTCCTCTCGACTCACTCATTCGATTTTTGATGACCTGATCGTCGACCGTCATCGNCGGACGCCGGCTCGCCGCTTCGG-AAATNCAGCCTTCAGCGCTTCTGTTCAGTGGCATGCCGNGTGTGTCATGGCCGGTTCGTCGGCGCCGGCCGCCGGGATCAGCGATTTCTTTTTCTGTTCGGCGTCCAGACTCCAGAACTCCAGCAGCGTGCAGGCGGCAGGCATGTGGCTGTGATGCCGTGTGGGTGTGGCAGATTGCATAAAAAAGATGAAGATATTGCAGGATGTTTTCATTCATTAAGCGGGATGTTTTTCTTCAAAGTGAATGAAGAAAATATAATGGACACTTTCATGGCCACTGTTAGAAGTAGACCTTATAAAAAGTAGTAGTATGGTAATTTTCTTCAAACTTTTCTAGCCATATAAACTTGTTTAAGTCTGAATTTTACTAATTAATTGCTAATTTATATATGTTTTAAGATGTCTTATTAATATATATAACATGGTACACTTTTGGTTTAAAAAAAA]

[+] EMBL AU065489             [TCCGCCGCAAGATTGGTGGGCAGGAGCATGACCGCGAGCGCTGATCGAGCGAGATAGAGATCGAGTCCGCGACTCCGCAACGGNGTCTCTGCCCTCCGCGCCATGACCGCNATGGCGCGACTGCTCTGTCCTCTCGACTCACTCATTCGATTTTTGATGACCTGATCGTCGACCGTCATCGNCGGACGCCGGCTCGCCGCTTCGG AAATNCAGCCTTCAGCGCTTCTGTTCAGTGGCATGCCGNGTGTGTCATGGCCGG                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU082603             [          GATTGGTGGGCAGGAGCATGACCGCGAGCGCTGATCGAGCGAGATAGAGATCGAGTCCGCGACTCCGCAACGGCGTCTCTGCCCTCCGCGCCATGACCGCGATGGCGCGACTGCTCTGTCCTCTCGACTCACTCATTCGATTTTTGATGACCTGATCGTCGACCGTCATCGCCGGACGCCGGCTCGCCGCTTCGGCGAAT CAGCCTTCAGCGCTTCTGTTCAGTGGCATGCCGCGTGTGTCATGGCCGGTTCGTCGGCGCCGGCCGCCGGGATCAGCGATTTCTTTTTCTGTTCGGCGTCCAGACTCCAGAACTCCAGCAGCGTGCAGGCGGCAGGCATGTGGCTGTGATGCCGTGTGGGTGTGGCAGATTGCATAAAAAAGATGAAGATATTGCAGGATGTTTTCATTCATTAAGCGGGATGTTTTTCTTCAAAGTGAATGAAGAAAATATAATGGACACTTTCATGGCCACTGTTAGAAGTAGACCTTATAAAAAGTAGTAGTATGGTAATTTTCTTCAAACTTTTCTAGCCATATAAACTTGTTTAAGTCTGAATTTTACTAATTAATTGCTAATTTATATATGTTTTAAGATGTCTTATTAATATATATAACATGGTACACTTTTGGTTTAAAAAAAA]




>consensus_3198#0
TCCGCCGCAAGATTGGTGGGCAGGAGCATGACCGCGAGCGCTGATCGAGCGAGATAGAGA
TCGAGTCCGCGACTCCGCAACGGNGTCTCTGCCCTCCGCGCCATGACCGCNATGGCGCGA
CTGCTCTGTCCTCTCGACTCACTCATTCGATTTTTGATGACCTGATCGTCGACCGTCATC
GNCGGACGCCGGCTCGCCGCTTCGGAAATNCAGCCTTCAGCGCTTCTGTTCAGTGGCATG
CCGNGTGTGTCATGGCCGGTTCGTCGGCGCCGGCCGCCGGGATCAGCGATTTCTTTTTCT
GTTCGGCGTCCAGACTCCAGAACTCCAGCAGCGTGCAGGCGGCAGGCATGTGGCTGTGAT
GCCGTGTGGGTGTGGCAGATTGCATAAAAAAGATGAAGATATTGCAGGATGTTTTCATTC
ATTAAGCGGGATGTTTTTCTTCAAAGTGAATGAAGAAAATATAATGGACACTTTCATGGC
CACTGTTAGAAGTAGACCTTATAAAAAGTAGTAGTATGGTAATTTTCTTCAAACTTTTCT
AGCCATATAAACTTGTTTAAGTCTGAATTTTACTAATTAATTGCTAATTTATATATGTTT
TAAGATGTCTTATTAATATATATAACATGGTACACTTTTGGTTTAAAAAAAA

clustalw multiple alignements is not computed in this case