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Oryza sativa
cluster # 3200 cluster # 3200       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3200#0 length = 2282 sequences # 2  

consensusID : consensus_3200#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2282
fasta sequence
                              [GACATGGAAAGCTTTCGTGTGTTCATGTGTTCATGGTTGATGGCGGTCAAGCGGCGATGAATTGATATCACTGGGTTCTAGAAGCTTAAGCAGCCGCCCATGGCGACACGGCCGTCGCCGCGGTCGCGAGACAGCGCGCGGCGAAAAGCACAAGCGGGAGGCCTCCGTCGAGCCCGCGAAGCTCCGACACCACCCGCCGCTCCTCCTTCACCGCCGCCTCGTCGTCCGACAAGCCGGTGCCGTCCTTCCTCCGCCCCACCGTGAGCTCGTCCCTGCACAGCTCGTCTTCGTCATCGCCGTCGTCGTCGTCGTTGTTGTCGTCGTCTCCCTCCTCCAAGGGCACCGGCACCACGCCGAGGAGGTCCGCGGACAAGGCCCCGTCTGCGTCTGCAGCTTCGTCGCGGCCGATCACGCCCAAGGACAAGGCCCCCGCTGTAGCGACGTCGCGGCCGATCACGCCCAAAGACAAGGCCAAGGCGGCGGCGGCGTCGACGTCGCGATGGTCCGCGGTGTCGCCGAGGCAGCTGATGCAGAAGGCGTCCAATGCCTTTACAAGAGGCAGCAGCAGCAAGTCGCGCGCTGCCAAGAAAGACAAGGAGGCGGCCACCCCGGCGGCGACCTCGGCCGCCGCCAAGGACGCGGCCACTCCGGCGTCGACCTCGGCCGTCCGCAAGAAGGCCGCCACACCGGCGACCTCGGCGGCTGGAAAGGCGGTGGCCGGTGCTTCGCCCGGGCCGACGAGAGCCCAGCCCACGGAGGAGCACCACCAGCAACCCACTGAAGCGCCGCCGGCCGAACCGTCACCTGCCGCCGCCGCGGTGCAAGAAGAGGCGGTGACTTCGAGAGCCCAGCTCACGGAGGAGCACCACCAGCAACCACCTGAAGCGCCCGCCGAGCCGTCACCTGCCGCCGTCGCCGTGCAAGAAGAAGCAGCGGCTGCGGAGACCGAAGCAGAGCAAGAAAAACAACCGGATGAGACGCCGCAAGAAGTCGTCGCGGCAGTGGAGGAGAAAGTTCAAGACGAGCAGGTTAGCACGGAAGCAGCGGAGGAAGCCATCGCCGTCGAGGAGGATGCCGCCGCCGTGAAGACCGATGCGCCGGAGCCGGAAGAGACGCAGACGCAAACCGGTGCCATTGCAGAGTCGGAAACAGAGTTTCAGAGGAGTTCAGAGGATGAGCCGGCATCCGACGCCATTGTCGAAGAAGCGGCGATCGAATCTGCAACGCAGAATGAGCCAGATGAACCAGAATCCACCACGGTTGAAGAGATGGCCGTCGAGGAGGAGATCAAGACCGATGAGAGCCAACAAGAAGAGACGCCAAAACCAGAAGAGAGAATGGAGAACTCTGAAACAAGCGTGATCTCTGAAGATCCAAAAGAAATGGATGCAATCTCTGAAGACCAAAAGGTGGAAGAACCCGTGGTTGCTGAAGAACAAGAGGAACTCTCCGAGGTTGTAAAAATGGCTGTCGAGCCGAGCATCTCGTCAGAGCCAGCAACGCCGCTGGAGGAAGAAGATCGCGACGACGTGGAGACGGAGCAAGCGAACTCGTCGGAGCCCGCAACGACGGTGGAGGAAGAAGAAGATCGCGACGACGTGGAGACGGAGCAAGCGAGCTCGTCAGACCCCGCAACGCCGTTGAACGAAGAAGCTATCAACGAGGAGGGCACGTCGACGGAGACGGGGAAGACGAAGAAGGTGGCGTTCAAGGGGAGCAAGGTGAAGACGGCGATGGAGAGGCGGCCGGAGGGGGAGCAGCCGAGGAAGAAGGACGTGGCGCGGAGCAACGACGTGATCGAGGAGACCAAGAGGACGCTGATGATGAAGAGGAAGAGCAAGGTGAAGGCGCTGGTTGGGGCGTTCGAGACGGTCATGGACACCCCCAGCCCGGGAAAATCGAGCTGATTTTGATTTGGATTTTTTTTTCTTCTTTTTTTTTGGAGGGAAAGCTTCAGCGGTGATGCACGTATTGAGTGGTTTGAATTGAACTGCGAGGTGTGCTTTGTGGTGTGATGTTTCGGTTTCTTGTTCTCTTTGTTGCATTGATCGTTGATTGATTCTTCTGATAACTGAAACAAATGGAAATGTTATTGTCGATTTGTTTGTTTGTTGATCATTCGATCTAGTGTTGTTTACTAGGCTTAGTTGTATGTAACTAAAAAGGGAAATAGCTGTGTGTTCTTGAGAGCTGAGACTGGTGTGGTTGTCAACTTGTGCTACATTGCTGAGTTTTGAGATTTATGCTTGTAAACAATTATTGATGACATGCAATCCATTTTG]

[+] EMBL AK100512             [GACATGGAAAGCTTTCGTGTGTTCATGTGTTCATGGTTGATGGCGGTCAAGCGGCGATGAATTGATATCACTGGGTTCTAGAAGCTTAAGCAGCCGCCCATGGCGACACGGCCGTCGCCGCGGTCGCGAGACAGCGCGCGGCGAAAAGCACAAGCGGGAGGCCTCCGTCGAGCCCGCGAAGCTCCGACACCACCCGCCGCTCCTCCTTCACCGCCGCCTCGTCGTCCGACAAGCCGGTGCCGTCCTTCCTCCGCCCCACCGTGAGCTCGTCCCTGCACAGCTCGTCTTCGTCATCGCCGTCGTCGTCGTCGTTGTTGTCGTCGTCTCCCTCCTCCAAGGGCACCGGCACCACGCCGAGGAGGTCCGCGGACAAGGCCCCGTCTGCGTCTGCAGCTTCGTCGCGGCCGATCACGCCCAAGGACAAGGCCCCCGCTGTAGCGACGTCGCGGCCGATCACGCCCAAAGACAAGGCCAAGGCGGCGGCGGCGTCGACGTCGCGATGGTCCGCGGTGTCGCCGAGGCAGCTGATGCAGAAGGCGTCCAATGCCTTTACAAGAGGCAGCAGCAGCAAGTCGCGCGCTGCCAAGAAAGACAAGGAGGCGGCCACCCCGGCGGCGACCTCGGCCGCCGCCAAGGACGCGGCCACTCCGGCGTCGACCTCGGCCGTCCGCAAGAAGGCCGCCACACCGGCGACCTCGGCGGCTGGAAAGGCGGTGGCCGGTGCTTCGCCCGGGCCGACGAGAGCCCAGCCCACGGAGGAGCACCACCAGCAACCCACTGAAGCGCCGCCGGCCGAACCGTCACCTGCCGCCGCCGCGGTGCAAGAAGAGGCGGTGACTTCGAGAGCCCAGCTCACGGAGGAGCACCACCAGCAACCACCTGAAGCGCCCGCCGAGCCGTCACCTGCCGCCGTCGCCGTGCAAGAAGAAGCAGCGGCTGCGGAGACCGAAGCAGAGCAAGAAAAACAACCGGATGAGACGCCGCAAGAAGTCGTCGCGGCAGTGGAGGAGAAAGTTCAAGACGAGCAGGTTAGCACGGAAGCAGCGGAGGAAGCCATCGCCGTCGAGGAGGATGCCGCCGCCGTGAAGACCGATGCGCCGGAGCCGGAAGAGACGCAGACGCAAACCGGTGCCATTGCAGAGTCGGAAACAGAGTTTCAGAGGAGTTCAGAGGATGAGCCGGCATCCGACGCCATTGTCGAAGAAGCGGCGATCGAATCTGCAACGCAGAATGAGCCAGATGAACCAGAATCCACCACGGTTGAAGAGATGGCCGTCGAGGAGGAGATCAAGACCGATGAGAGCCAACAAGAAGAGACGCCAAAACCAGAAGAGAGAATGGAGAACTCTGAAACAAGCGTGATCTCTGAAGATCCAAAAGAAATGGATGCAATCTCTGAAGACCAAAAGGTGGAAGAACCCGTGGTTGCTGAAGAACAAGAGGAACTCTCCGAGGTTGTAAAAATGGCTGTCGAGCCGAGCATCTCGTCAGAGCCAGCAACGCCGCTGGAGGAAGAAGATCGCGACGACGTGGAGACGGAGCAAGCGAACTCGTCGGAGCCCGCAACGACGGTGGAGGAAGAAGAAGATCGCGACGACGTGGAGACGGAGCAAGCGAGCTCGTCAGACCCCGCAACGCCGTTGAACGAAGAAGCTATCAACGAGGAGGGCACGTCGACGGAGACGGGGAAGACGAAGAAGGTGGCGTTCAAGGGGAGCAAGGTGAAGACGGCGATGGAGAGGCGGCCGGAGGGGGAGCAGCCGAGGAAGAAGGACGTGGCGCGGAGCAACGACGTGATCGAGGAGACCAAGAGGACGCTGATGATGAAGAGGAAGAGCAAGGTGAAGGCGCTGGTTGGGGCGTTCGAGACGGTCATGGACACCCCCAGCCCGGGAAAATCGAGCTGATTTTGATTTGGATTTTTTTTTCTTCTTTTTTTTTGGAGGGAAAGCTTCAGCGGTGATGCACGTATTGAGTGGTTTGAATTGAACTGCGAGGTGTGCTTTGTGGTGTGATGTTTCGGTTTCTTGTTCTCTTTGTTGCATTGATCGTTGATTGATTCTTCTGATAACTGAAACAAATGGAAATGTTATTGTCGATTTGTTTGTTTGTTGATCATTCGATCTAGTGTTGTTTACTAGGCTTAGTTGTATGTAACTAAAAAGGGAAATAGCTGTGTGTTCTTGAGAGCTGAGACTGGTGTGGTTGTCAACTTGTGCTACATTGCTGAGTTTTGAGATTTATGCTTGTAAACAATTATTGATGACATGCAATCCATTTTG]
[+] EMBL AU085896             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGGAGCAGCCGAGGAAGAAGGACGTGGCGCGGAGCAACGACGTGATCGAGGAGACCAAGAGGACGCTGATGATGAAGAGGAAGAGCAAGGTGAAGGCGCTGGTTGGGGCGTTCGAGACGGTCATGGACACCCCCAGCCCGGGAAAATCGAGCTGATTTTGATTTGGATTTTTTT   TTCTTTTTTTTTGGAGGGAAAGCTTCAGCGGTGATGCACGTATTGAGTGGTTTGAATTGAAaaa                                                                                                                                                                                                                                                                                                 ]


>consensus_3200#0 GACATGGAAAGCTTTCGTGTGTTCATGTGTTCATGGTTGATGGCGGTCAAGCGGCGATGA ATTGATATCACTGGGTTCTAGAAGCTTAAGCAGCCGCCCATGGCGACACGGCCGTCGCCG CGGTCGCGAGACAGCGCGCGGCGAAAAGCACAAGCGGGAGGCCTCCGTCGAGCCCGCGAA GCTCCGACACCACCCGCCGCTCCTCCTTCACCGCCGCCTCGTCGTCCGACAAGCCGGTGC CGTCCTTCCTCCGCCCCACCGTGAGCTCGTCCCTGCACAGCTCGTCTTCGTCATCGCCGT CGTCGTCGTCGTTGTTGTCGTCGTCTCCCTCCTCCAAGGGCACCGGCACCACGCCGAGGA GGTCCGCGGACAAGGCCCCGTCTGCGTCTGCAGCTTCGTCGCGGCCGATCACGCCCAAGG ACAAGGCCCCCGCTGTAGCGACGTCGCGGCCGATCACGCCCAAAGACAAGGCCAAGGCGG CGGCGGCGTCGACGTCGCGATGGTCCGCGGTGTCGCCGAGGCAGCTGATGCAGAAGGCGT CCAATGCCTTTACAAGAGGCAGCAGCAGCAAGTCGCGCGCTGCCAAGAAAGACAAGGAGG CGGCCACCCCGGCGGCGACCTCGGCCGCCGCCAAGGACGCGGCCACTCCGGCGTCGACCT CGGCCGTCCGCAAGAAGGCCGCCACACCGGCGACCTCGGCGGCTGGAAAGGCGGTGGCCG GTGCTTCGCCCGGGCCGACGAGAGCCCAGCCCACGGAGGAGCACCACCAGCAACCCACTG AAGCGCCGCCGGCCGAACCGTCACCTGCCGCCGCCGCGGTGCAAGAAGAGGCGGTGACTT CGAGAGCCCAGCTCACGGAGGAGCACCACCAGCAACCACCTGAAGCGCCCGCCGAGCCGT CACCTGCCGCCGTCGCCGTGCAAGAAGAAGCAGCGGCTGCGGAGACCGAAGCAGAGCAAG AAAAACAACCGGATGAGACGCCGCAAGAAGTCGTCGCGGCAGTGGAGGAGAAAGTTCAAG ACGAGCAGGTTAGCACGGAAGCAGCGGAGGAAGCCATCGCCGTCGAGGAGGATGCCGCCG CCGTGAAGACCGATGCGCCGGAGCCGGAAGAGACGCAGACGCAAACCGGTGCCATTGCAG AGTCGGAAACAGAGTTTCAGAGGAGTTCAGAGGATGAGCCGGCATCCGACGCCATTGTCG AAGAAGCGGCGATCGAATCTGCAACGCAGAATGAGCCAGATGAACCAGAATCCACCACGG TTGAAGAGATGGCCGTCGAGGAGGAGATCAAGACCGATGAGAGCCAACAAGAAGAGACGC CAAAACCAGAAGAGAGAATGGAGAACTCTGAAACAAGCGTGATCTCTGAAGATCCAAAAG AAATGGATGCAATCTCTGAAGACCAAAAGGTGGAAGAACCCGTGGTTGCTGAAGAACAAG AGGAACTCTCCGAGGTTGTAAAAATGGCTGTCGAGCCGAGCATCTCGTCAGAGCCAGCAA CGCCGCTGGAGGAAGAAGATCGCGACGACGTGGAGACGGAGCAAGCGAACTCGTCGGAGC CCGCAACGACGGTGGAGGAAGAAGAAGATCGCGACGACGTGGAGACGGAGCAAGCGAGCT CGTCAGACCCCGCAACGCCGTTGAACGAAGAAGCTATCAACGAGGAGGGCACGTCGACGG AGACGGGGAAGACGAAGAAGGTGGCGTTCAAGGGGAGCAAGGTGAAGACGGCGATGGAGA GGCGGCCGGAGGGGGAGCAGCCGAGGAAGAAGGACGTGGCGCGGAGCAACGACGTGATCG AGGAGACCAAGAGGACGCTGATGATGAAGAGGAAGAGCAAGGTGAAGGCGCTGGTTGGGG CGTTCGAGACGGTCATGGACACCCCCAGCCCGGGAAAATCGAGCTGATTTTGATTTGGAT TTTTTTTTCTTCTTTTTTTTTGGAGGGAAAGCTTCAGCGGTGATGCACGTATTGAGTGGT TTGAATTGAACTGCGAGGTGTGCTTTGTGGTGTGATGTTTCGGTTTCTTGTTCTCTTTGT TGCATTGATCGTTGATTGATTCTTCTGATAACTGAAACAAATGGAAATGTTATTGTCGAT TTGTTTGTTTGTTGATCATTCGATCTAGTGTTGTTTACTAGGCTTAGTTGTATGTAACTA AAAAGGGAAATAGCTGTGTGTTCTTGAGAGCTGAGACTGGTGTGGTTGTCAACTTGTGCT ACATTGCTGAGTTTTGAGATTTATGCTTGTAAACAATTATTGATGACATGCAATCCATTT TG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)