cluster # 3211

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3211 cluster # 3211 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3211#0 length = 1732 sequences # 2
consensusID : consensus_3211#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1732
fasta sequence
                              [CAATCACAGAGAAGGCACATCATCAAACAAATCAGGAAAGGAAGGAAGAAAGGAGAGGAAAGGAGGGAGTGAAGAACAAATCTTGATTCGTCCTCACTGCGCACTGCCCCCCCGTCCGTGTGGTTCCAGCTGATCACCAGCAGCGGCCGGCGTCTTCTCGTCTCGATCCCTCCTGCCTCTTTGGCCGCGGCTCGATTTGGGCGGTCAAGATGAACAGGATGATGTTCATGGCGTGCTGCTACAACGATCCGGACATGCTCATCGATCCGGACACGGTCTACCCCATCCGCCCCGAGTGCCGCGAAGACGCCGCCAAGACGCGATTCAAGCCCAGGCCTGGCCTCACTCTAAGTCCAAGGAGATGGAAGCTGCTTCACAATGAAGAAGGTGTCCTAGACATAGCTGGAATGATCAAAAGAGTGCAGCGTGGGGGTACCCACCCAAATATCAAAGGAGAAGTTTGGGAGTTTTTGCTGGGTTGTTATGACCCTAAAAGCAATACTGAACAAAAGAGCCAATTAAGACAACAGCGAAGGTTAGAATATGAGAAACTGAAAACAAAGTGCCGAGAAATGGACACGGCAGTCGGTAGCGGAAGGGTAATTACTATGCCTGTCATAACAGAAGATGGCCAGCCTATACAGGATCCTAACTCAGTTGATGCAGAACAACAAGCTAGTGACACACCCCTACCAAAGGAAGTAATTCAATGGAAGCTAACTCTGCACCAGATTGGTCTTGATGTTAATCGTACAGATCGTCAACTAGTCTATTATGAGAGCCAAGAGAACTTGGCCAGGTTGTGGGACATTCTTGCAGTTTATTCATGGGTTGACAAGGACATCGGTTATTGTCAAGGAATGAGTGATCTTTGCTCACCAATGTCGATCCTCTTGGAACACGAAGCGGATGCGTTTTGGTGCTTTGAGCGACTTATGCGCAGGGTGCGAGGAAATTTCGTGAGTAGTTCAACCTCCATTGGAGTTCGATCTCAACTGACCATATTGTCATCCGTAATGAAAGCCGTTGATCCGAAGCTACATGAGCATTTAGAAAATCTTGATGGAGGGGAATACTTATTTGCCTTCCGTATGCTGATGGTTCTTTTCCGAAGGGAGTTCTCTTTTGTAGACACAATGTACCTTTGGGAGCTCATGTGGTCTATGGAGTACAATCCAGGTCTCTTTTCTATGTTGGAGAGTGATAACAGTACATCTCAAGCAAACACAAAAGATGAAAATGCCTTAAAGCAGTGTGGAAAATTCGAACAGAAAAACTTACAGGCGGCTAAAAAGGAAGAGCAGATACCTCTATCTGTGTTCATTGTGGCTAGTGTCATAGAGGCTAGAAACAAGCAGATACTGACTGATGCAAAAGGTCTAGACGATGTCGTGAAGATATTAAACGATATCACTGGAAGTCTGGATGCAAAGAAGGCATGCAGAGGGGCACTGAAGATTCATGAGAGATACCTAACCACAGTAAAAGCATGATAGTAGCATTTACAGATCCTTATTAATACATCTTAAGTGACGATATTCGATTGGGCTTTTTGTGAACTGGAGAAGCAGCTACATCGCAATTTTTCCCCATTTTTGATACGTGTGTGTATTATACAATTCTTTGATTTTCTTTGTAATACTACAAAAGAAAGGAACGCCAATCCTGTAAAGGTACATCACGAAATGTTTGGTATCGGTGGAATTATGCTGCAATAACATCGTCATGATTC]

[+] EMBL AK071602             [CAATCACAGAGAAGGCACATCATCAAACAAATCAGGAAAGGAAGGAAGAAAGGAGAGGAAAGGAGGGAGTGAAGAACAAATCTTGATTCGTCCTCACTGCGCACTGCCCCCCCGTCCGTGTGGTTCCAGCTGATCACCAGCAGCGGCCGGCGTCTTCTCGTCTCGATCCCTCCTGCCTCTTTGGCCGCGGCTCGATTTGGGCGGTCAAGATGAACAGGATGATGTTCATGGCGTGCTGCTACAACGATCCGGACATGCTCATCGATCCGGACACGGTCTACCCCATCCGCCCCGAGTGCCGCGAAGACGCCGCCAAGACGCGATTCAAGCCCAGGCCTGGCCTCACTCTAAGTCCAAGGAGATGGAAGCTGCTTCACAATGAAGAAGGTGTCCTAGACATAGCTGGAATGATCAAAAGAGTGCAGCGTGGGGGTACCCACCCAAATATCAAAGGAGAAGTTTGGGAGTTTTTGCTGGGTTGTTATGACCCTAAAAGCAATACTGAACAAAAGAGCCAATTAAGACAACAGCGAAGGTTAGAATATGAGAAACTGAAAACAAAGTGCCGAGAAATGGACACGGCAGTCGGTAGCGGAAGGGTAATTACTATGCCTGTCATAACAGAAGATGGCCAGCCTATACAGGATCCTAACTCAGTTGATGCAGAACAACAAGCTAGTGACACACCCCTACCAAAGGAAGTAATTCAATGGAAGCTAACTCTGCACCAGATTGGTCTTGATGTTAATCGTACAGATCGTCAACTAGTCTATTATGAGAGCCAAGAGAACTTGGCCAGGTTGTGGGACATTCTTGCAGTTTATTCATGGGTTGACAAGGACATCGGTTATTGTCAAGGAATGAGTGATCTTTGCTCACCAATGTCGATCCTCTTGGAACACGAAGCGGATGCGTTTTGGTGCTTTGAGCGACTTATGCGCAGGGTGCGAGGAAATTTCGTGAGTAGTTCAACCTCCATTGGAGTTCGATCTCAACTGACCATATTGTCATCCGTAATGAAAGCCGTTGATCCGAAGCTACATGAGCATTTAGAAAATCTTGATGGAGGGGAATACTTATTTGCCTTCCGTATGCTGATGGTTCTTTTCCGAAGGGAGTTCTCTTTTGTAGACACAATGTACCTTTGGGAGCTCATGTGGTCTATGGAGTACAATCCAGGTCTCTTTTCTATGTTGGAGAGTGATAACAGTACATCTCAAGCAAACACAAAAGATGAAAATGCCTTAAAGCAGTGTGGAAAATTCGAACAGAAAAACTTACAGGCGGCTAAAAAGGAAGAGCAGATACCTCTATCTGTGTTCATTGTGGCTAGTGTCATAGAGGCTAGAAACAAGCAGATACTGACTGATGCAAAAGGTCTAGACGATGTCGTGAAGATATTAAACGATATCACTGGAAGTCTGGATGCAAAGAAGGCATGCAGAGGGGCACTGAAGATTCATGAGAGATACCTAACCACAGTAAAAGCATGATAGTAGCATTTACAGATCCTTATTAATACATCTTAAGTGACGATATTCGATTGGGCTTTTTGTGAACTGGAGAAGCAGCTACATCGCAATTTTTCCCCATTTTTGATACGTGTGTGTATTATACAATTCTTTGATTTTCTTTGTAATACTACAAAAGAAAGGAACGCCAATCCTGTAAAGGTACATCACGAAATGTTTGGTATCGGTGGAATTATGCTGCAATAACATCGTCATG    ]
[+] EMBL CA766057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCGAAGGGAGTTCTCTTTTGTAGACGCAATGTACCTTTGGGAGCTCATGTGGTCTATGGAGTACAATCCAGGTCTCTTTTCTATGTTGGAGAGTGATAACAGTACATCTCAAGCAAACACAAAAGATGAAAATGCCTTAAAGCAGTGTGGAAAATTCGAACAGAAAAACTTACAGGCGGCTAAAAAGGAAGAGCAGATACCTCTATCTGTGTTCATTGTGGCTAGTGTCATAGAGGCTAGAAACAAGCAGATACTGACTGATGCAAAAGGTCTAGACGATGTCGTGAAGATATTAAACGATATCACTGGAAGTCTGGATGCAAAGAAGGCATGCAGAGGGGCACTGAAGATTCATGAGAGATACCTAACCACAGTAAAAGCATGATAGTAGCATTTACAGATCCTTATTAATACATCTTAAGTGACGATATTCGATTGGGCTTTTTGTGAACTGGAGAAGCAGCTACATCGCAATTTTTCCCCATTTTTGATAGGTGTGTGTATTATACAATTCTTTGATTTTCTTTGTAAT        AGAAAGGAACGCCAATCCTGTAAAGGTACATCACGAAATGTTTGGTATCGGTGGAATTATGCTGCAATAACATCGTCATGATTC]




>consensus_3211#0
CAATCACAGAGAAGGCACATCATCAAACAAATCAGGAAAGGAAGGAAGAAAGGAGAGGAA
AGGAGGGAGTGAAGAACAAATCTTGATTCGTCCTCACTGCGCACTGCCCCCCCGTCCGTG
TGGTTCCAGCTGATCACCAGCAGCGGCCGGCGTCTTCTCGTCTCGATCCCTCCTGCCTCT
TTGGCCGCGGCTCGATTTGGGCGGTCAAGATGAACAGGATGATGTTCATGGCGTGCTGCT
ACAACGATCCGGACATGCTCATCGATCCGGACACGGTCTACCCCATCCGCCCCGAGTGCC
GCGAAGACGCCGCCAAGACGCGATTCAAGCCCAGGCCTGGCCTCACTCTAAGTCCAAGGA
GATGGAAGCTGCTTCACAATGAAGAAGGTGTCCTAGACATAGCTGGAATGATCAAAAGAG
TGCAGCGTGGGGGTACCCACCCAAATATCAAAGGAGAAGTTTGGGAGTTTTTGCTGGGTT
GTTATGACCCTAAAAGCAATACTGAACAAAAGAGCCAATTAAGACAACAGCGAAGGTTAG
AATATGAGAAACTGAAAACAAAGTGCCGAGAAATGGACACGGCAGTCGGTAGCGGAAGGG
TAATTACTATGCCTGTCATAACAGAAGATGGCCAGCCTATACAGGATCCTAACTCAGTTG
ATGCAGAACAACAAGCTAGTGACACACCCCTACCAAAGGAAGTAATTCAATGGAAGCTAA
CTCTGCACCAGATTGGTCTTGATGTTAATCGTACAGATCGTCAACTAGTCTATTATGAGA
GCCAAGAGAACTTGGCCAGGTTGTGGGACATTCTTGCAGTTTATTCATGGGTTGACAAGG
ACATCGGTTATTGTCAAGGAATGAGTGATCTTTGCTCACCAATGTCGATCCTCTTGGAAC
ACGAAGCGGATGCGTTTTGGTGCTTTGAGCGACTTATGCGCAGGGTGCGAGGAAATTTCG
TGAGTAGTTCAACCTCCATTGGAGTTCGATCTCAACTGACCATATTGTCATCCGTAATGA
AAGCCGTTGATCCGAAGCTACATGAGCATTTAGAAAATCTTGATGGAGGGGAATACTTAT
TTGCCTTCCGTATGCTGATGGTTCTTTTCCGAAGGGAGTTCTCTTTTGTAGACACAATGT
ACCTTTGGGAGCTCATGTGGTCTATGGAGTACAATCCAGGTCTCTTTTCTATGTTGGAGA
GTGATAACAGTACATCTCAAGCAAACACAAAAGATGAAAATGCCTTAAAGCAGTGTGGAA
AATTCGAACAGAAAAACTTACAGGCGGCTAAAAAGGAAGAGCAGATACCTCTATCTGTGT
TCATTGTGGCTAGTGTCATAGAGGCTAGAAACAAGCAGATACTGACTGATGCAAAAGGTC
TAGACGATGTCGTGAAGATATTAAACGATATCACTGGAAGTCTGGATGCAAAGAAGGCAT
GCAGAGGGGCACTGAAGATTCATGAGAGATACCTAACCACAGTAAAAGCATGATAGTAGC
ATTTACAGATCCTTATTAATACATCTTAAGTGACGATATTCGATTGGGCTTTTTGTGAAC
TGGAGAAGCAGCTACATCGCAATTTTTCCCCATTTTTGATACGTGTGTGTATTATACAAT
TCTTTGATTTTCTTTGTAATACTACAAAAGAAAGGAACGCCAATCCTGTAAAGGTACATC
ACGAAATGTTTGGTATCGGTGGAATTATGCTGCAATAACATCGTCATGATTC
clustalw multiple alignements is not computed in this case