cluster # 3226

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Oryza sativa
cluster # 3226 cluster # 3226 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3226#0 length = 2411 sequences # 1

consensus_3226#1 length = 398 sequences # 1

consensusID : consensus_3226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2411
fasta sequence

                              [CCCCCCTCTCACGCGGTCACGCCCTCCGCACCGCACGCCCTCGAGTTTCTCCTCCTCGTCGACGTCGACCTCGCTTACGGCTTCACCCATCCGCAGCCGCCGCCGTCGCCGTCGTCGTACGATTTCCACGCGAGCCGCGATGCCGCCTCCAGCGTGGGGGTGGGGCTCCAACCCGCTGGAGCCCGTCGTCCACACCGTCGCGGCCTTCTCCCGCCGCCTCCTCATTGCCCCCGACGCCGCGCCCGACGAAGCACGCCTCCGCCCCCTCCTCTCCCTCTCCCTCTCCCCTCCGCCCACCCCGCCGTCGCCGCCGCCGCCGCCACCGGAGGTCCTCAAGAAGGATTCGAAGGCGGCGCCCCTGACCAAGGAGGAGGTCGGCAGGGCCACGTGGATGCTGCTCCACACCATCGCAGCGCAGTTTCCTGACGAACCAACCAGGCAACAAAGACGCGATGCGAGAGAGCTGGTAAGCATTAAGCAGGATAAACAGTTAGTGATATCTCTCTAGAGTTTGGGTGGAAGTATGGTAAAGTCCCTTGTTTTGATTTTGGGGGAAACATGAGGACCTTGCTGTCGCTACCCACTCGTAATTTGTCACGGCTAACTACAGGATTGTTGAATCTTAGAAAAGGCACTTTCTTGATGTTTATCTTGGGGGCCTTGTATTCTCCTGCAATGGATCCTGTTTAAGATATAGCTTGTATTTAATTTATTCTTTATGTGCCTTGAAATATTCAAGATTACTTTAAGACTGCACAGTAAAGTTCCAGCATGGTAATCTCGTGATTTTGTTGCTACAGGATGCAGGCTTTGTTCTAGGTGTTCTCCTGGTTCATTCCCCGCTAACTTTGAGCTTAGACATTTTTAGAAAATGTTTTGTGCTTTTGGTCTAGCACAGTTATGAATTACCACTACATTGCTTGACAAATAAATGTTATACTTTGCATCGTTGAAAATGGGTGGCAGTATGTTACGACTACTGCTAAGGTTTCGTTTGGAATCGACTATCTCATTTGATTGAACCTCATTTAGATATATGGGTGTTTGGCTAGCTGTTATTTTTTTTTCTCAATCATGGTGCATACAGATGCATTATCATCATATAAAACATCTGAGTTGAAATTTGATGGATGAGTCTACCAAATTGGATAACTGAGTTTTACAAATTGTTCCATGAAAACTTAAAAAATAAGCATAGGCCAGCACAACAACTGCAAATTGAGCCTCAATCCATGATGAATAATGGGAAGTTCGTTCACTGGTTTTTTACTCGCTTTAACGAAGAGGAATTATTTTATTATTTCCTGAAGAATTACATTTTTCTGCATCTCATTATTCCTTTTGCTTGGTTACTTGGTTCATGCAAGGTCACATTTCTGCTGCTTTTTATGTTCAGATGGCTATAATATCTAGACTCTATCCTTGCAAAGAATGTGCGGAACACTTCAAAGAAGTTTTAAAGTAAGAAATGCTCTCCAACCACTAGCATAAATTATAGTATCCATTTTGATAGTTTGATTCCTCGAGATGTGTTTCTGTGTGACAGGACTATGTTTTGTTGAAATGTTGGTATGTAATACATTATCAACCTTTATCCATTCATTGTTTTAGGGCGAGATATAACATCATGTAGGAACTATAAATTCTTTGTACTTTTGCATTATGAAACTGTGCTTCTGGATCTTTTATATTCTAAAGCTATGCATCCACAAACTCGTTTAAAAACTTTTTAGTTATTTTACACCATCTGTACCTTTTGGGAATATGATTTACAGAAGCTATGGTGATAATGGGATGTGGGAATTGGATGTAACAATCCATTTATAAGCTCATTTCTCTTATAGCTATTTTTCATTTACTTTTATGGTTATAATGTCGTTTTTGCTGTCATAGTTTATTATGTTCCAGTTATATCCAGCTGCCAATTTCTGTTGTTCTGTTTTTTTCTTGTGCTGCCCTTAAATTTTCATGTTTGTGCTCAATGTAGCAACAATAAACTGTCTCGGCACAATATTGAACTGACTTCTTTATGTTCTTTTTGCTTAGAGCAAATCCTGTGCAGGCAGGATCTCAGGCTGAATTCTCTCAGTGGTTATGCTACGTGCACAATGTGGTCAATCGAAGCCTTGGAAAACCTATATTTCCTTGCCAGAGAGTAAATGCACGGTGGGGTAAGCTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCAACGACATCATCCCGAATAGGTGACATTAGATAGGGATCGTTTAGAAATTCTGGAACAGTGACAAAGTTTAAACCATCACTGGATGGGCAGCATGAAGAGCATATGGGAAAAGAATTATAACGCCGTGCCGGCATTCTTCCTATACCCTTGTAATACTAGTGTATCAAATGTGATTTCATTTTGTTATTTACAAGC]

[+] EMBL AK102625             [CCCCCCTCTCACGCGGTCACGCCCTCCGCACCGCACGCCCTCGAGTTTCTCCTCCTCGTCGACGTCGACCTCGCTTACGGCTTCACCCATCCGCAGCCGCCGCCGTCGCCGTCGTCGTACGATTTCCACGCGAGCCGCGATGCCGCCTCCAGCGTGGGGGTGGGGCTCCAACCCGCTGGAGCCCGTCGTCCACACCGTCGCGGCCTTCTCCCGCCGCCTCCTCATTGCCCCCGACGCCGCGCCCGACGAAGCACGCCTCCGCCCCCTCCTCTCCCTCTCCCTCTCCCCTCCGCCCACCCCGCCGTCGCCGCCGCCGCCGCCACCGGAGGTCCTCAAGAAGGATTCGAAGGCGGCGCCCCTGACCAAGGAGGAGGTCGGCAGGGCCACGTGGATGCTGCTCCACACCATCGCAGCGCAGTTTCCTGACGAACCAACCAGGCAACAAAGACGCGATGCGAGAGAGCTGGTAAGCATTAAGCAGGATAAACAGTTAGTGATATCTCTCTAGAGTTTGGGTGGAAGTATGGTAAAGTCCCTTGTTTTGATTTTGGGGGAAACATGAGGACCTTGCTGTCGCTACCCACTCGTAATTTGTCACGGCTAACTACAGGATTGTTGAATCTTAGAAAAGGCACTTTCTTGATGTTTATCTTGGGGGCCTTGTATTCTCCTGCAATGGATCCTGTTTAAGATATAGCTTGTATTTAATTTATTCTTTATGTGCCTTGAAATATTCAAGATTACTTTAAGACTGCACAGTAAAGTTCCAGCATGGTAATCTCGTGATTTTGTTGCTACAGGATGCAGGCTTTGTTCTAGGTGTTCTCCTGGTTCATTCCCCGCTAACTTTGAGCTTAGACATTTTTAGAAAATGTTTTGTGCTTTTGGTCTAGCACAGTTATGAATTACCACTACATTGCTTGACAAATAAATGTTATACTTTGCATCGTTGAAAATGGGTGGCAGTATGTTACGACTACTGCTAAGGTTTCGTTTGGAATCGACTATCTCATTTGATTGAACCTCATTTAGATATATGGGTGTTTGGCTAGCTGTTATTTTTTTTTCTCAATCATGGTGCATACAGATGCATTATCATCATATAAAACATCTGAGTTGAAATTTGATGGATGAGTCTACCAAATTGGATAACTGAGTTTTACAAATTGTTCCATGAAAACTTAAAAAATAAGCATAGGCCAGCACAACAACTGCAAATTGAGCCTCAATCCATGATGAATAATGGGAAGTTCGTTCACTGGTTTTTTACTCGCTTTAACGAAGAGGAATTATTTTATTATTTCCTGAAGAATTACATTTTTCTGCATCTCATTATTCCTTTTGCTTGGTTACTTGGTTCATGCAAGGTCACATTTCTGCTGCTTTTTATGTTCAGATGGCTATAATATCTAGACTCTATCCTTGCAAAGAATGTGCGGAACACTTCAAAGAAGTTTTAAAGTAAGAAATGCTCTCCAACCACTAGCATAAATTATAGTATCCATTTTGATAGTTTGATTCCTCGAGATGTGTTTCTGTGTGACAGGACTATGTTTTGTTGAAATGTTGGTATGTAATACATTATCAACCTTTATCCATTCATTGTTTTAGGGCGAGATATAACATCATGTAGGAACTATAAATTCTTTGTACTTTTGCATTATGAAACTGTGCTTCTGGATCTTTTATATTCTAAAGCTATGCATCCACAAACTCGTTTAAAAACTTTTTAGTTATTTTACACCATCTGTACCTTTTGGGAATATGATTTACAGAAGCTATGGTGATAATGGGATGTGGGAATTGGATGTAACAATCCATTTATAAGCTCATTTCTCTTATAGCTATTTTTCATTTACTTTTATGGTTATAATGTCGTTTTTGCTGTCATAGTTTATTATGTTCCAGTTATATCCAGCTGCCAATTTCTGTTGTTCTGTTTTTTTCTTGTGCTGCCCTTAAATTTTCATGTTTGTGCTCAATGTAGCAACAATAAACTGTCTCGGCACAATATTGAACTGACTTCTTTATGTTCTTTTTGCTTAGAGCAAATCCTGTGCAGGCAGGATCTCAGGCTGAATTCTCTCAGTGGTTATGCTACGTGCACAATGTGGTCAATCGAAGCCTTGGAAAACCTATATTTCCTTGCCAGAGAGTAAATGCACGGTGGGGTAAGCTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCAACGACATCATCCCGAATAGGTGACATTAGATAGGGATCGTTTAGAAATTCTGGAACAGTGACAAAGTTTAAACCATCACTGGATGGGCAGCATGAAGAGCATATGGGAAAAGAATTATAACGCCGTGCCGGCATTCTTCCTATACCCTTGTAATACTAGTGTATCAAATGTGATTTCATTTTGTTATTTACAAGC]




>consensus_3226#0
CCCCCCTCTCACGCGGTCACGCCCTCCGCACCGCACGCCCTCGAGTTTCTCCTCCTCGTC
GACGTCGACCTCGCTTACGGCTTCACCCATCCGCAGCCGCCGCCGTCGCCGTCGTCGTAC
GATTTCCACGCGAGCCGCGATGCCGCCTCCAGCGTGGGGGTGGGGCTCCAACCCGCTGGA
GCCCGTCGTCCACACCGTCGCGGCCTTCTCCCGCCGCCTCCTCATTGCCCCCGACGCCGC
GCCCGACGAAGCACGCCTCCGCCCCCTCCTCTCCCTCTCCCTCTCCCCTCCGCCCACCCC
GCCGTCGCCGCCGCCGCCGCCACCGGAGGTCCTCAAGAAGGATTCGAAGGCGGCGCCCCT
GACCAAGGAGGAGGTCGGCAGGGCCACGTGGATGCTGCTCCACACCATCGCAGCGCAGTT
TCCTGACGAACCAACCAGGCAACAAAGACGCGATGCGAGAGAGCTGGTAAGCATTAAGCA
GGATAAACAGTTAGTGATATCTCTCTAGAGTTTGGGTGGAAGTATGGTAAAGTCCCTTGT
TTTGATTTTGGGGGAAACATGAGGACCTTGCTGTCGCTACCCACTCGTAATTTGTCACGG
CTAACTACAGGATTGTTGAATCTTAGAAAAGGCACTTTCTTGATGTTTATCTTGGGGGCC
TTGTATTCTCCTGCAATGGATCCTGTTTAAGATATAGCTTGTATTTAATTTATTCTTTAT
GTGCCTTGAAATATTCAAGATTACTTTAAGACTGCACAGTAAAGTTCCAGCATGGTAATC
TCGTGATTTTGTTGCTACAGGATGCAGGCTTTGTTCTAGGTGTTCTCCTGGTTCATTCCC
CGCTAACTTTGAGCTTAGACATTTTTAGAAAATGTTTTGTGCTTTTGGTCTAGCACAGTT
ATGAATTACCACTACATTGCTTGACAAATAAATGTTATACTTTGCATCGTTGAAAATGGG
TGGCAGTATGTTACGACTACTGCTAAGGTTTCGTTTGGAATCGACTATCTCATTTGATTG
AACCTCATTTAGATATATGGGTGTTTGGCTAGCTGTTATTTTTTTTTCTCAATCATGGTG
CATACAGATGCATTATCATCATATAAAACATCTGAGTTGAAATTTGATGGATGAGTCTAC
CAAATTGGATAACTGAGTTTTACAAATTGTTCCATGAAAACTTAAAAAATAAGCATAGGC
CAGCACAACAACTGCAAATTGAGCCTCAATCCATGATGAATAATGGGAAGTTCGTTCACT
GGTTTTTTACTCGCTTTAACGAAGAGGAATTATTTTATTATTTCCTGAAGAATTACATTT
TTCTGCATCTCATTATTCCTTTTGCTTGGTTACTTGGTTCATGCAAGGTCACATTTCTGC
TGCTTTTTATGTTCAGATGGCTATAATATCTAGACTCTATCCTTGCAAAGAATGTGCGGA
ACACTTCAAAGAAGTTTTAAAGTAAGAAATGCTCTCCAACCACTAGCATAAATTATAGTA
TCCATTTTGATAGTTTGATTCCTCGAGATGTGTTTCTGTGTGACAGGACTATGTTTTGTT
GAAATGTTGGTATGTAATACATTATCAACCTTTATCCATTCATTGTTTTAGGGCGAGATA
TAACATCATGTAGGAACTATAAATTCTTTGTACTTTTGCATTATGAAACTGTGCTTCTGG
ATCTTTTATATTCTAAAGCTATGCATCCACAAACTCGTTTAAAAACTTTTTAGTTATTTT
ACACCATCTGTACCTTTTGGGAATATGATTTACAGAAGCTATGGTGATAATGGGATGTGG
GAATTGGATGTAACAATCCATTTATAAGCTCATTTCTCTTATAGCTATTTTTCATTTACT
TTTATGGTTATAATGTCGTTTTTGCTGTCATAGTTTATTATGTTCCAGTTATATCCAGCT
GCCAATTTCTGTTGTTCTGTTTTTTTCTTGTGCTGCCCTTAAATTTTCATGTTTGTGCTC
AATGTAGCAACAATAAACTGTCTCGGCACAATATTGAACTGACTTCTTTATGTTCTTTTT
GCTTAGAGCAAATCCTGTGCAGGCAGGATCTCAGGCTGAATTCTCTCAGTGGTTATGCTA
CGTGCACAATGTGGTCAATCGAAGCCTTGGAAAACCTATATTTCCTTGCCAGAGAGTAAA
TGCACGGTGGGGTAAGCTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCAACGA
CATCATCCCGAATAGGTGACATTAGATAGGGATCGTTTAGAAATTCTGGAACAGTGACAA
AGTTTAAACCATCACTGGATGGGCAGCATGAAGAGCATATGGGAAAAGAATTATAACGCC
GTGCCGGCATTCTTCCTATACCCTTGTAATACTAGTGTATCAAATGTGATTTCATTTTGT
TATTTACAAGC

consensusID : consensus_3226#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 398
fasta sequence

                              [AATTAAGGCACCCTTTTACCATAAAGGGCCTTGGAAAACCTATATTTCCTTGCCCGAGAGTAAATGCCCGGTGGGGTAACTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCCACGACATCATCCCGATAGATGACCTTAGATAGGGATCGTTTAGAAATTCTGGAACACGTGACCAAGTTTAAACCCTCACTGGATGGGCAGCCTGAAGAGCATATGGGAAAAGAATTATAACGCCGTGCCGGCACTTCTTCCTATACCCCTGTAATACTAGTGTATCCAATGTGATTTCATTTTGTTATTTACCAGCTTCAGCTCTGAAGATTTTTGCTGAGGTTGTCATTTTTGTGGATTTATATACTTCGTTCTGATGCTTTGATTCCAAAAAAAAAA]

[+] EMBL BI804975             [AATTAAGGCACCCTTTTACCATAAAGGGCCTTGGAAAACCTATATTTCCTTGCCCGAGAGTAAATGCCCGGTGGGGTAACTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCCACGACATCATCCCGATAGATGACCTTAGATAGGGATCGTTTAGAAATTCTGGAACACGTGACCAAGTTTAAACCCTCACTGGATGGGCAGCCTGAAGAGCATATGGGAAAAGAATTATAACGCCGTGCCGGCACTTCTTCCTATACCCCTGTAATACTAGTGTATCCAATGTGATTTCATTTTGTTATTTACCAGCTTCAGCTCTGAAGATTTTTGCTGAGGTTGTCATTTTTGTGGATTTATATACTTCGTTCTGATGCTTTGATTCCAAAAAAAAAA]




>consensus_3226#1
AATTAAGGCACCCTTTTACCATAAAGGGCCTTGGAAAACCTATATTTCCTTGCCCGAGAG
TAAATGCCCGGTGGGGTAACTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCCA
CGACATCATCCCGATAGATGACCTTAGATAGGGATCGTTTAGAAATTCTGGAACACGTGA
CCAAGTTTAAACCCTCACTGGATGGGCAGCCTGAAGAGCATATGGGAAAAGAATTATAAC
GCCGTGCCGGCACTTCTTCCTATACCCCTGTAATACTAGTGTATCCAATGTGATTTCATT
TTGTTATTTACCAGCTTCAGCTCTGAAGATTTTTGCTGAGGTTGTCATTTTTGTGGATTT
ATATACTTCGTTCTGATGCTTTGATTCCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3226#0      CCCCCCTCTCACGCGGTCACGCCCTCCGCACCGCACGCCCTCGAGTTTCTCCTCCTCGTC 60
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GACGTCGACCTCGCTTACGGCTTCACCCATCCGCAGCCGCCGCCGTCGCCGTCGTCGTAC 120
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GATTTCCACGCGAGCCGCGATGCCGCCTCCAGCGTGGGGGTGGGGCTCCAACCCGCTGGA 180
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GCCCGTCGTCCACACCGTCGCGGCCTTCTCCCGCCGCCTCCTCATTGCCCCCGACGCCGC 240
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GCCCGACGAAGCACGCCTCCGCCCCCTCCTCTCCCTCTCCCTCTCCCCTCCGCCCACCCC 300
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GCCGTCGCCGCCGCCGCCGCCACCGGAGGTCCTCAAGAAGGATTCGAAGGCGGCGCCCCT 360
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GACCAAGGAGGAGGTCGGCAGGGCCACGTGGATGCTGCTCCACACCATCGCAGCGCAGTT 420
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TCCTGACGAACCAACCAGGCAACAAAGACGCGATGCGAGAGAGCTGGTAAGCATTAAGCA 480
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GGATAAACAGTTAGTGATATCTCTCTAGAGTTTGGGTGGAAGTATGGTAAAGTCCCTTGT 540
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TTTGATTTTGGGGGAAACATGAGGACCTTGCTGTCGCTACCCACTCGTAATTTGTCACGG 600
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      CTAACTACAGGATTGTTGAATCTTAGAAAAGGCACTTTCTTGATGTTTATCTTGGGGGCC 660
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TTGTATTCTCCTGCAATGGATCCTGTTTAAGATATAGCTTGTATTTAATTTATTCTTTAT 720
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GTGCCTTGAAATATTCAAGATTACTTTAAGACTGCACAGTAAAGTTCCAGCATGGTAATC 780
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TCGTGATTTTGTTGCTACAGGATGCAGGCTTTGTTCTAGGTGTTCTCCTGGTTCATTCCC 840
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      CGCTAACTTTGAGCTTAGACATTTTTAGAAAATGTTTTGTGCTTTTGGTCTAGCACAGTT 900
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      ATGAATTACCACTACATTGCTTGACAAATAAATGTTATACTTTGCATCGTTGAAAATGGG 960
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TGGCAGTATGTTACGACTACTGCTAAGGTTTCGTTTGGAATCGACTATCTCATTTGATTG 1020
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      AACCTCATTTAGATATATGGGTGTTTGGCTAGCTGTTATTTTTTTTTCTCAATCATGGTG 1080
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      CATACAGATGCATTATCATCATATAAAACATCTGAGTTGAAATTTGATGGATGAGTCTAC 1140
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      CAAATTGGATAACTGAGTTTTACAAATTGTTCCATGAAAACTTAAAAAATAAGCATAGGC 1200
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      CAGCACAACAACTGCAAATTGAGCCTCAATCCATGATGAATAATGGGAAGTTCGTTCACT 1260
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GGTTTTTTACTCGCTTTAACGAAGAGGAATTATTTTATTATTTCCTGAAGAATTACATTT 1320
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TTCTGCATCTCATTATTCCTTTTGCTTGGTTACTTGGTTCATGCAAGGTCACATTTCTGC 1380
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TGCTTTTTATGTTCAGATGGCTATAATATCTAGACTCTATCCTTGCAAAGAATGTGCGGA 1440
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      ACACTTCAAAGAAGTTTTAAAGTAAGAAATGCTCTCCAACCACTAGCATAAATTATAGTA 1500
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TCCATTTTGATAGTTTGATTCCTCGAGATGTGTTTCTGTGTGACAGGACTATGTTTTGTT 1560
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GAAATGTTGGTATGTAATACATTATCAACCTTTATCCATTCATTGTTTTAGGGCGAGATA 1620
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TAACATCATGTAGGAACTATAAATTCTTTGTACTTTTGCATTATGAAACTGTGCTTCTGG 1680
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      ATCTTTTATATTCTAAAGCTATGCATCCACAAACTCGTTTAAAAACTTTTTAGTTATTTT 1740
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      ACACCATCTGTACCTTTTGGGAATATGATTTACAGAAGCTATGGTGATAATGGGATGTGG 1800
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GAATTGGATGTAACAATCCATTTATAAGCTCATTTCTCTTATAGCTATTTTTCATTTACT 1860
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      TTTATGGTTATAATGTCGTTTTTGCTGTCATAGTTTATTATGTTCCAGTTATATCCAGCT 1920
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GCCAATTTCTGTTGTTCTGTTTTTTTCTTGTGCTGCCCTTAAATTTTCATGTTTGTGCTC 1980
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      AATGTAGCAACAATAAACTGTCTCGGCACAATATTGAACTGACTTCTTTATGTTCTTTTT 2040
consensus_3226#1      ------------------------------------------------------------
                                                                                  

consensus_3226#0      GCTTAGAGCAAATCCTGTGCAGGCAGGATCTCAGGCTGAATTCTCTCAGTGGTTATGCTA 2100
consensus_3226#1      -------------------------------------------------------AATTA 5
                                                                                **

consensus_3226#0      CGTGCACAATGTGGTCAATCGAAGCCTTGGAAAACCTATATTTCCTTGCCAGAGAGTAAA 2160
consensus_3226#1      AG-GCACCCTTTTACCATAAAGGGCCTTGGAAAACCTATATTTCCTTGCCCGAGAGTAAA 64
                       * ****  * *   **      *************************** *********

consensus_3226#0      TGCACGGTGGGGTAAGCTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCAACGA 2220
consensus_3226#1      TGCCCGGTGGGGTAA-CTGGATTGTCCTGAACGCTCTTGTGATCTAGAAGGCTCCCACGA 123
                      *** *********** *************************************** ****

consensus_3226#0      CATCATCCCGAATAGGTGACATTAGATAGGGATCGTTTAGAAATTCTGGAACA-GTGACA 2279
consensus_3226#1      CATCATCCCGA-TAGATGACCTTAGATAGGGATCGTTTAGAAATTCTGGAACACGTGACC 182
                      *********** *** **** ******************************** ***** 

consensus_3226#0      AAGTTTAAACCATCACTGGATGGGCAGCATGAAGAGCATATGGGAAAAGAATTATAACGC 2339
consensus_3226#1      AAGTTTAAACCCTCACTGGATGGGCAGCCTGAAGAGCATATGGGAAAAGAATTATAACGC 242
                      *********** **************** *******************************

consensus_3226#0      CGTGCCGGCA-TTCTTCCTATACCCTTGTAATACTAGTGTATCAAATGTGATTTCATTTT 2398
consensus_3226#1      CGTGCCGGCACTTCTTCCTATACCCCTGTAATACTAGTGTATCCAATGTGATTTCATTTT 302
                      ********** ************** ***************** ****************

consensus_3226#0      GTTATTTACAAGC----------------------------------------------- 2411
consensus_3226#1      GTTATTTACCAGCTTCAGCTCTGAAGATTTTTGCTGAGGTTGTCATTTTTGTGGATTTAT 362
                      ********* ***                                               

consensus_3226#0      ------------------------------------
consensus_3226#1      ATACTTCGTTCTGATGCTTTGATTCCAAAAAAAAAA 398