cluster # 3299

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Oryza sativa
cluster # 3299 cluster # 3299 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3299#0 length = 1971 sequences # 2
consensusID : consensus_3299#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1971
fasta sequence
                              [CTCCCCTCCCCTCCCCTCCCCTTCCCACCGCCTCCGCCCTTCGTCGTCGTCGTCGTCGCGCATGGAGTCACCCGCCGCGGGCGGCGCGTCTCCGGCGCCGGAGGCTCCTCCGCCCCCGCCGAGGGGGTGGATCTCCGGCCTCGTCTCCGGAGCCGGCCGGATCCTCGCCTCCGTGCTAGGTCCCGACTCGCCTGCCGCCGCCTCCGGCTCCGCCACGACGACCTCAGCCACGTCGCCGTCCGCGTCCTCCTCCCCGGCGTCGTCCAGGCATCCCGGTTATATTCGAGATCATGGTAATTCCCCACTATTTTTTCCGAAAGCTAATAAGTTAAACAAGAGTGAAAATGAAGCAATTATGAAAGATTATTCTGAGGCATCACTAGCAATTATCTCAGAGATTGAGCCGAAGGATGCCATAATGCAGTTACTTAAGCAGGAGACTTATTCAAGGTCTGAATGCAATGCACTAGTAAAGATAATTCAAGAGCGGGTTGTGGACTCAAATTTAAATGGAGTTGATGCTGGTGGGCTTGCTCTTCCAATCAATTGGAAGACTGGCAGACAAGCAAATATTGGATATTCTTCATTGAGTCCAAAAGGATTGTTGCCTGCAACTTCAATTCCTCCAGTCCAGGACCATGTTTTTGATAATAGTGCTGGTGCCGGTGCATCTACAACAATAGCTCATGATAGGGGTCCTTTCGCCACGCTACTGATAAGATTCAATCCGTACTCAAAAGAAGTTGCTCTGTTGCAACGGATACCCCTGACCCTGAGGACTCCCGAAGAGTCAGGCCAAAAATTAATGGAAATTCATTAGAAATTTCAAATTTTAAGCAAGTCGATGTTATTCGAACTCATTCAGGAGATGACAATAAATTATCAGATGTTCCCCTTTTTGGGACCAACAATTTAATATATTCTAATATTGTTTCAATTGTTGGGAGTGCCGATGAAAAAATAGGCATACCTAACAAACCTTCAGCTGGTGATGGCAATAAAAACTATGATTCTGAATTTTTAAATCCATGTACCAATAAGGATCTGAAGAACAGCTTTCCATTGAAGGTGGAACCTTTGGATGTTTGTATTCCTTTCGAGCAGCAGATGATGGATCTCTCACACCAGAAGCATGAGCATGCTGCATGTGATGATTATTGTTCTGTCTCAAAATTAATGTTTAAGGAGGATATTGAGACTGCACTCAGCATGCCAGTGGGCGTGCCGCTAGAAAATGGTTCTAAGAACCGGAGACGAAGGGCACCCAACACGCAGAGGATTACCCCGGCAAGGTCTCCTGCCAAGGGTTCACGTCGCAAGAGTAATGATGTCACAGTAAAATCAGAGACCGACTTGCTAGAGCAAAGCAAGGGTTCACATGATGTCACAGTAAAGTCAGAGATCGACTTGCTAGAGCAAAGTAAATTGGCACTGATGGAGCAGTCACCAGATTTAGGCGATATTCCGGTGAAGAGACCAGTTGGGAGGCCAAGGAAGGCAAAATGAATGCTAGACAAATTTGATGTCCTCAAATCTGTCCATGGTCTTATGTATATCATCTCTGAAGAACCTGAAAAGTCACAATCTCTGAAGGACATTGCAGCCTTCACTCTTGTACAGATGTCTGTTCCATCTGACATGTGTATCAAGTATTAGACAGAAGGAAA-GGGAAACATTGCCATGTACCCAGTAGTCTAACTTATGTCTGTTAATTGGTAAATGTAGTAATGTACTCAACATGTAGGTGTAGTGCATGTCACAAACTTCATTTGATGCATTTCTGGCTCTTGCACTCCTGCTGTCTATGTGTAAAGTTCTGATATTCAGGGTACGTTTGACAAAGCTCCGGATCTTGTCTGGATCAGAAGTTTGTAAGTTAAATCGAAGTGATTTAAAATTGTACATTTCATTTAGAATAGGAACCGAATTATTCATTCAATTGTTACTGACATAATCCCTAATTCAAATCAT]

[+] EMBL AK072436             [CTCCCCTCCCCTCCCCTCCCCTTCCCACCGCCTCCGCCCTTCGTCGTCGTCGTCGTCGCGCATGGAGTCACCCGCCGCGGGCGGCGCGTCTCCGGCGCCGGAGGCTCCTCCGCCCCCGCCGAGGGGGTGGATCTCCGGCCTCGTCTCCGGAGCCGGCCGGATCCTCGCCTCCGTGCTAGGTCCCGACTCGCCTGCCGCCGCCTCCGGCTCCGCCACGACGACCTCAGCCACGTCGCCGTCCGCGTCCTCCTCCCCGGCGTCGTCCAGGCATCCCGGTTATATTCGAGATCATGGTAATTCCCCACTATTTTTTCCGAAAGCTAATAAGTTAAACAAGAGTGAAAATGAAGCAATTATGAAAGATTATTCTGAGGCATCACTAGCAATTATCTCAGAGATTGAGCCGAAGGATGCCATAATGCAGTTACTTAAGCAGGAGACTTATTCAAGGTCTGAATGCAATGCACTAGTAAAGATAATTCAAGAGCGGGTTGTGGACTCAAATTTAAATGGAGTTGATGCTGGTGGGCTTGCTCTTCCAATCAATTGGAAGACTGGCAGACAAGCAAATATTGGATATTCTTCATTGAGTCCAAAAGGATTGTTGCCTGCAACTTCAATTCCTCCAGTCCAGGACCATGTTTTTGATAATAGTGCTGGTGCCGGTGCATCTACAACAATAGCTCATGATAGGGGTCCTTTCGCCACGCTACTGATAAGATTCAATCCGTACTCAAAAGAAGTTGCTCTGTTGCAACGGATACCCCTGACCCTGAGGACTCCCGAAGAGTCAGGCCAAAAATTAATGGAAATTCATTAGAAATTTCAAATTTTAAGCAAGTCGATGTTATTCGAACTCATTCAGGAGATGACAATAAATTATCAGATGTTCCCCTTTTTGGGACCAACAATTTAATATATTCTAATATTGTTTCAATTGTTGGGAGTGCCGATGAAAAAATAGGCATACCTAACAAACCTTCAGCTGGTGATGGCAATAAAAACTATGATTCTGAATTTTTAAATCCATGTACCAATAAGGATCTGAAGAACAGCTTTCCATTGAAGGTGGAACCTTTGGATGTTTGTATTCCTTTCGAGCAGCAGATGATGGATCTCTCACACCAGAAGCATGAGCATGCTGCATGTGATGATTATTGTTCTGTCTCAAAATTAATGTTTAAGGAGGATATTGAGACTGCACTCAGCATGCCAGTGGGCGTGCCGCTAGAAAATGGTTCTAAGAACCGGAGACGAAGGGCACCCAACACGCAGAGGATTACCCCGGCAAGGTCTCCTGCCAAGGGTTCACGTCGCAAGAGTAATGATGTCACAGTAAAATCAGAGACCGACTTGCTAGAGCAAAGCAAGGGTTCACATGATGTCACAGTAAAGTCAGAGATCGACTTGCTAGAGCAAAGTAAATTGGCACTGATGGAGCAGTCACCAGATTTAGGCGATATTCCGGTGAAGAGACCAGTTGGGAGGCCAAGGAAGGCAAAATGAATGCTAGACAAATTTGATGTCCTCAAATCTGTCCATGGTCTTATGTATATCATCTCTGAAGAACCTGAAAAGTCACAATCTCTGAAGGACATTGCAGCCTTCACTCTTGTACAGATGTCTGTTCCATCTGACATGTGTATCAAGTATTAGACAGAAGGAAA GGGAAACATTGCCATGTACCCAGTAGTCTAACTTATGTCTGTTAATTGGTAAATGTAGTAATGTACTCAACATGTAGGTGTAGTGCATGTCACAAACTTCATTTGATGCATTTCTGGCTCTTGCACTCCTGCTGTCTATGTGTAAAGTTCTGATATTCAGGGTACGTTTGACAAAGCTCCGGATCTTGTCTGGATCAGAAGTTTGTAAGTTAAATCGAAGTGATTTAAAATTGTACATTTCATTTAGAATAGGAACCGAATTATTCATTCAATTGTTACTGACATAATCCCTAATTCAAATCAT]
[+] EMBL CA766635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGAAAAAATAGGCATACCTAACAAACCTTCAGCTGGTGATGACAATAAAAACTATGATTCTGAATTTTTAAATCCATGTACCAATAAGGATCTGGAGAACAGCTCTCCATTGAAGGTGGAACCTTTGGATGTTTGTATTCCTTTCGAGCAGCAGATGATGGATCTCTCACACCAGAAGCATGAGCATGCTGCATGTGATGATTCTTGTTCTGTCTCAAAATTAATGTTTAAGGAGGATATTGAGACTGCACTCAGCTTGCCAGTGGGCGTGCCGCTAGAAAATGGTTCTAAGAACCGGAGACGAAGGGCACCCAACACGCAGAGGATTACCCCGGCAAGGTCTCCTGCCAAGGGTTCACGTCGCAAGAGTAATGATGTCACAGTAAAATCAGAGACCGACTTGCTAGAGCAAAGCAAGGGTTCACATGATGCCACAGTAAAGTCAGAGATCGACTTGCTAGAGCAAAGTAAATTGGCACTGATGGAGCAGTCACCAGATTTAGGCGATATTCCGGTGAAGAGACCAGTTGGGAGGCCAAGGAAGGCAAAATGAATGCTAGACAAATTTGATGTCCTCAAATCTGTCCATGGTCTTATGTATATCATCTCTGAAGAACCTGAAAAGTCACAATCTCTGAAGGACATTGCAGCCTTCACTCTTGTACAGATGTCTGTTCCATCTGACATGTGTATCAAGTATTAGACAGAAGGAAAGGGGAAACATTGNCATGTACCCAGTAGTCTAACTTATGTCTG                                                                                                                                                                                                                                                                       ]




>consensus_3299#0
CTCCCCTCCCCTCCCCTCCCCTTCCCACCGCCTCCGCCCTTCGTCGTCGTCGTCGTCGCG
CATGGAGTCACCCGCCGCGGGCGGCGCGTCTCCGGCGCCGGAGGCTCCTCCGCCCCCGCC
GAGGGGGTGGATCTCCGGCCTCGTCTCCGGAGCCGGCCGGATCCTCGCCTCCGTGCTAGG
TCCCGACTCGCCTGCCGCCGCCTCCGGCTCCGCCACGACGACCTCAGCCACGTCGCCGTC
CGCGTCCTCCTCCCCGGCGTCGTCCAGGCATCCCGGTTATATTCGAGATCATGGTAATTC
CCCACTATTTTTTCCGAAAGCTAATAAGTTAAACAAGAGTGAAAATGAAGCAATTATGAA
AGATTATTCTGAGGCATCACTAGCAATTATCTCAGAGATTGAGCCGAAGGATGCCATAAT
GCAGTTACTTAAGCAGGAGACTTATTCAAGGTCTGAATGCAATGCACTAGTAAAGATAAT
TCAAGAGCGGGTTGTGGACTCAAATTTAAATGGAGTTGATGCTGGTGGGCTTGCTCTTCC
AATCAATTGGAAGACTGGCAGACAAGCAAATATTGGATATTCTTCATTGAGTCCAAAAGG
ATTGTTGCCTGCAACTTCAATTCCTCCAGTCCAGGACCATGTTTTTGATAATAGTGCTGG
TGCCGGTGCATCTACAACAATAGCTCATGATAGGGGTCCTTTCGCCACGCTACTGATAAG
ATTCAATCCGTACTCAAAAGAAGTTGCTCTGTTGCAACGGATACCCCTGACCCTGAGGAC
TCCCGAAGAGTCAGGCCAAAAATTAATGGAAATTCATTAGAAATTTCAAATTTTAAGCAA
GTCGATGTTATTCGAACTCATTCAGGAGATGACAATAAATTATCAGATGTTCCCCTTTTT
GGGACCAACAATTTAATATATTCTAATATTGTTTCAATTGTTGGGAGTGCCGATGAAAAA
ATAGGCATACCTAACAAACCTTCAGCTGGTGATGGCAATAAAAACTATGATTCTGAATTT
TTAAATCCATGTACCAATAAGGATCTGAAGAACAGCTTTCCATTGAAGGTGGAACCTTTG
GATGTTTGTATTCCTTTCGAGCAGCAGATGATGGATCTCTCACACCAGAAGCATGAGCAT
GCTGCATGTGATGATTATTGTTCTGTCTCAAAATTAATGTTTAAGGAGGATATTGAGACT
GCACTCAGCATGCCAGTGGGCGTGCCGCTAGAAAATGGTTCTAAGAACCGGAGACGAAGG
GCACCCAACACGCAGAGGATTACCCCGGCAAGGTCTCCTGCCAAGGGTTCACGTCGCAAG
AGTAATGATGTCACAGTAAAATCAGAGACCGACTTGCTAGAGCAAAGCAAGGGTTCACAT
GATGTCACAGTAAAGTCAGAGATCGACTTGCTAGAGCAAAGTAAATTGGCACTGATGGAG
CAGTCACCAGATTTAGGCGATATTCCGGTGAAGAGACCAGTTGGGAGGCCAAGGAAGGCA
AAATGAATGCTAGACAAATTTGATGTCCTCAAATCTGTCCATGGTCTTATGTATATCATC
TCTGAAGAACCTGAAAAGTCACAATCTCTGAAGGACATTGCAGCCTTCACTCTTGTACAG
ATGTCTGTTCCATCTGACATGTGTATCAAGTATTAGACAGAAGGAAAGGGAAACATTGCC
ATGTACCCAGTAGTCTAACTTATGTCTGTTAATTGGTAAATGTAGTAATGTACTCAACAT
GTAGGTGTAGTGCATGTCACAAACTTCATTTGATGCATTTCTGGCTCTTGCACTCCTGCT
GTCTATGTGTAAAGTTCTGATATTCAGGGTACGTTTGACAAAGCTCCGGATCTTGTCTGG
ATCAGAAGTTTGTAAGTTAAATCGAAGTGATTTAAAATTGTACATTTCATTTAGAATAGG
AACCGAATTATTCATTCAATTGTTACTGACATAATCCCTAATTCAAATCAT
clustalw multiple alignements is not computed in this case