cluster # 3323

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Oryza sativa
cluster # 3323 cluster # 3323 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3323#0 length = 831 sequences # 2

consensusID : consensus_3323#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 831
fasta sequence

                              [GACGACGACGGCAAAATCTAGGTGGGCATCTCCATCGTCGGTGGCTGGTTTGCTGATCGCCACCACGAGCGGCGTACCCCTCGTCGACTCTCCACGACGTGCAGGATCATGGTCGGGGCAACGAGACATCAGGCGCTGGTGACATCCTGGCACTGCTTGTAGCAGAGGCAACGGGAGTTCACCCCGATCGCAGATCAGAGCAGCCCATCCAAGCGGTGGAGAAATTATAAGTAGTGAGGGCAACTCCCCACAATTGTCTCGATGATGGTAAGAACAAGACTTTCCAGTCCGATATTTCATTTCATATTCATCAATGGCGGCGACGACAACACGGCATCGATCGATTTGCGAAGCCTATGCATCACGGCATCATGGTGGCGGCGACGGCACCGCCGCAGCAATCGAAGGAGCAGAGAGGCGGCTGCACCACAGTGCGCCGCTACGACTCCTCGCTACCGATGTGGAAGAAGAATGATGAAGCTCCTAATTAACTAGTTCTTTGCTCCATACAGATGCATGACAAATACACCATTGATGGTGGCCAACACCGGGCAGTATTCGCATAGTTGCATCGATTAGCTGATGTAGATGCAGAAAATGTGGATTTGGCAGTATGAAAATTCTGTCCAAAGCAGCTTGTGCAGGTCAAGAATTGGGTGTACTGTACATTCA-TTTTTCTTCTTTTTCAGAATGGCTAAATATGTATGAATCCATATACTGCCTGCATTATTGCAAGTTCTCTTGTGATCAGACTATGCTTCAATTTAATCTAAATCGAGGAAGGAACTTTCTATTCTTTAAAAAAAAAAAAAAAAAAAAANCNNACANAAA]

[+] EMBL AK071571             [GACGACGACGGCAAAATCTAGGTGGGCATCTCCATCGTCGGTGGCTGGTTTGCTGATCGCCACCACGAGCGGCGTACCCCTCGTCGACTCTCCACGACGTGCAGGATCATGGTCGGGGCAACGAGACATCAGGCGCTGGTGACATCCTGGCACTGCTTGTAGCAGAGGCAACGGGAGTTCACCCCGATCGCAGATCAGAGCAGCCCATCCAAGCGGTGGAGAAATTATAAGTAGTGAGGGCAACTCCCCACAATTGTCTCGATGATGGTAAGAACAAGACTTTCCAGTCCGATATTTCATTTCATATTCATCAATGGCGGCGACGACAACACGGCATCGATCGATTTGCGAAGCCTATGCATCACGGCATCATGGTGGCGGCGACGGCACCGCCGCAGCAATCGAAGGAGCAGAGAGGCGGCTGCACCACAGTGCGCCGCTACGACTCCTCGCTACCGATGTGGAAGAAGAATGATGAAGCTCCTAATTAACTAGTTCTTTGCTCCATACAGATGCATGACAAATACACCATTGATGGTGGCCAACACCGGGCAGTATTCGCATAGTTGCATCGATTAGCTGATGTAGATGCAGAAAATGTGGATTTGGCAGTATGAAAATTCTGTCCAAAGCAGCTTGTGCAGGTCAAGAATTGGGTGTACTGTACATTCA TTTTTCTTCTTTTTCAGAATGGCTAAATATGTATGAATCCATATACTGCCTGCATTATTGCAAGTTCTCTTGTGATCAGACTATGCTTCAATTTAATC                                                             ]
[+] EMBL CA766761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACATTCATTTTTTCTTCTTTTT AGAATGGCTAAATATGTATGAATCCATATACTGCCTGCATTATTGCAAGTTCTCTTGTGATCAGACTGTGCTTCAATTTAATCTAAATCGAGGAAGGAACTTTCTATTCTTTAAAAAAAAAAAAAAAAAAAAANCNNACANAAA]




>consensus_3323#0
GACGACGACGGCAAAATCTAGGTGGGCATCTCCATCGTCGGTGGCTGGTTTGCTGATCGC
CACCACGAGCGGCGTACCCCTCGTCGACTCTCCACGACGTGCAGGATCATGGTCGGGGCA
ACGAGACATCAGGCGCTGGTGACATCCTGGCACTGCTTGTAGCAGAGGCAACGGGAGTTC
ACCCCGATCGCAGATCAGAGCAGCCCATCCAAGCGGTGGAGAAATTATAAGTAGTGAGGG
CAACTCCCCACAATTGTCTCGATGATGGTAAGAACAAGACTTTCCAGTCCGATATTTCAT
TTCATATTCATCAATGGCGGCGACGACAACACGGCATCGATCGATTTGCGAAGCCTATGC
ATCACGGCATCATGGTGGCGGCGACGGCACCGCCGCAGCAATCGAAGGAGCAGAGAGGCG
GCTGCACCACAGTGCGCCGCTACGACTCCTCGCTACCGATGTGGAAGAAGAATGATGAAG
CTCCTAATTAACTAGTTCTTTGCTCCATACAGATGCATGACAAATACACCATTGATGGTG
GCCAACACCGGGCAGTATTCGCATAGTTGCATCGATTAGCTGATGTAGATGCAGAAAATG
TGGATTTGGCAGTATGAAAATTCTGTCCAAAGCAGCTTGTGCAGGTCAAGAATTGGGTGT
ACTGTACATTCATTTTTCTTCTTTTTCAGAATGGCTAAATATGTATGAATCCATATACTG
CCTGCATTATTGCAAGTTCTCTTGTGATCAGACTATGCTTCAATTTAATCTAAATCGAGG
AAGGAACTTTCTATTCTTTAAAAAAAAAAAAAAAAAAAAANCNNACANAAA

clustalw multiple alignements is not computed in this case