cluster # 3334

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3334 cluster # 3334 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3334#0 length = 1617 sequences # 2
consensusID : consensus_3334#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1617
fasta sequence
                              [TCCTCGCTAGTTGTGGCGAGCCCCAAAACCAACTCCCAATCCGCATCTCCCTCCGCTGCGCCGGCGCCGCCGCCCGCCGCCGCCGTGGCCCGGCCGTCGGCTCGCCTCCGCCTCCATCCTCGGGCACCGGACGTCGTCCCCGCCGCCCGGAGGCCGACCCCTTTGCCTCCTTAGGCCTTCTGCCCTAGTTCCGGCGGCCTGGCTCTAAATTCGGCCGCAGCCGGCGCAGGTCGATCACCGCCCGCGCGCCATTGGAAGCGGAGGTGGAGAAAGGAAGCTGGCATTGGTGCGTGATTGAAATGCTGACCTGATTTTTTTTAGTACATTGAGGATTAGCGATGGATGGAGACAGTTGTTATGTTAACTCACTGGTTGTTAAAATCAACTCGCCAGAGTGGGATGATGGCACCATGATGGGGGCTAGTCCACCCGAGGAGCAACATTCAACGGTCGAAGAAGTTGTTGTCGTGAGACGAAACCAGAAAAGAACAAAGAATTTCAGCGGGAAGGAAGACGAAGGGTTGGTTTCGGCATGGTTGAATGTTAGTAAGGATGTAGTCCAAGGCATCGAACAATCTCGTTGTGCATACTGGAAGAGAATTTACGATTACTTCCACGCAAACAAGGACTTCACCTCAGACCGTTCTCAAAATTCCCTCATGCACCGCTGGTCTACTATTCAAGAGAATGTGACCAAGTTCGAGGGTTGTCTAAGCCGGATTGGGGATAGAAAGCAAAGCTGGGTTTCAAGTCAAGATAAGATTATGCATGCATGTGCTCTGTACAAGGCCGAAGATGAGAACCATAGGCCATTTCACATGATGCACTGTTGGAATCTCTTGAGAAACCAGCAAAAATGGATTGATAGGTCGTCTCAGCTGCCATCTCACAAAAAACAGAAGATAACCAACAATTCAAGTCTAGGTATGTCTACTACTACTACTGATGATACTGCGGCTGCTCCTCCTCCTCCTCCAGGATTTGAGTTATCGAAGACTCCAGAAAGTATTAATGCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAGTAGGAATGCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAATAGGAAGGGGGAGAAAGAAAAACTACGACGAGGTGGAGATGTGGTCTTTGTGGAGGATTTAGATGATTTGTTGGCAAAGAAGAAAGAGGCAGATGTGGAGAAAGAGCTCAAGAAAGATGAGAGATATATACAATCACATGCCCTAGAGCAAGAGAAGGTTGCACTAGAACAAGCGAAGGTTGCAAACGAGACAAAAAATCTTGAGATGAGG-AGCAAAGAATTAGAATTGAAGACCA-AGGAGATAGATTTGAAAAGAAT-GTTAGAAGAAGAGAGGATTATGACTATGGAT-ATTAGTGCCATGTCTGGGCTACAACAACAATATTACAAGAGCTTGCAGGAGGAGATCGTCACTCGACGATTTAATAGCTCGGGTTGACCTCGTATGTCTATTATT-GTTGTT-ACGGACTATTATGTTTT-GCGAACCATGTTGAAGTCGTATAGAGAATTATGGTA-AACAGCCCNNACCTTGTTAAATTGTTCGGACTGTTAATGGAACTGCATCCCTTATAGGCTTACTCCCC]

[+] EMBL AK110997             [TCCTCGCTAGTTGTGGCGAGCCCCAAAACCAACTCCCAATCCGCATCTCCCTCCGCTGCGCCGGCGCCGCCGCCCGCCGCCGCCGTGGCCCGGCCGTCGGCTCGCCTCCGCCTCCATCCTCGGGCACCGGACGTCGTCCCCGCCGCCCGGAGGCCGACCCCTTTGCCTCCTTAGGCCTTCTGCCCTAGTTCCGGCGGCCTGGCTCTAAATTCGGCCGCAGCCGGCGCAGGTCGATCACCGCCCGCGCGCCATTGGAAGCGGAGGTGGAGAAAGGAAGCTGGCATTGGTGCGTGATTGAAATGCTGACCTGATTTTTTTTAGTACATTGAGGATTAGCGATGGATGGAGACAGTTGTTATGTTAACTCACTGGTTGTTAAAATCAACTCGCCAGAGTGGGATGATGGCACCATGATGGGGGCTAGTCCACCCGAGGAGCAACATTCAACGGTCGAAGAAGTTGTTGTCGTGAGACGAAACCAGAAAAGAACAAAGAATTTCAGCGGGAAGGAAGACGAAGGGTTGGTTTCGGCATGGTTGAATGTTAGTAAGGATGTAGTCCAAGGCATCGAACAATCTCGTTGTGCATACTGGAAGAGAATTTACGATTACTTCCACGCAAACAAGGACTTCACCTCAGACCGTTCTCAAAATTCCCTCATGCACCGCTGGTCTACTATTCAAGAGAATGTGACCAAGTTCGAGGGTTGTCTAAGCCGGATTGGGGATAGAAAGCAAAGCTGGGTTTCAAGTCAAGATAAGATTATGCATGCATGTGCTCTGTACAAGGCCGAAGATGAGAACCATAGGCCATTTCACATGATGCACTGTTGGAATCTCTTGAGAAACCAGCAAAAATGGATTGATAGGTCGTCTCAGCTGCCATCTCACAAAAAACAGAAGATAACCAACAATTCAAGTCTAGGTATGTCTACTACTACTACTGATGATACTGCGGCTGCTCCTCCTCCTCCTCCAGGATTTGAGTTATCGAAGACTCCAGAAAGTATTAATGCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAGTAGGAATGCTCCTCCAAGATGTGAGTTATCTGAGAGACCAGAAAATAGGAAGGGGGAGAAAGAAAAACTACGACGAGGTGGAGATGTGGTCTTTGTGGAGGATTTAGATGATTTGTTGGCAAAGAAGAAAGAGGCAGATGTGGAGAAAGAGCTCAAGAAAGATGAGAGATATATACAATCACATGCCCTAGAGCAAGAGAAGGTTGCACTAGAACAAGCGAAGGTTGCAAACGAGACAAAAAATCTTGAGATGAGG AGCAAAGAATTAGAATTGAAGACCA AGGAGATAGATTTGAAAAGAAT GTTAGAAGAAGAGAGGATTATGACTATGGAT ATTAGTGCCATGTCTGGGCTACAACAACAATATTACAAGAGCTTGCAGGAGGAGATCGTCACTCGACGATTTAATAGCTCGGGTTGACCTCGTATGTCTATTATT GTTGTT ACGGACTATTATGTTTT GCGAACCATGTTGAAGTCGTATAGAGAATTATGGTA AACAGC                                                              ]
[+] EMBL BI806043             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAAAGAAGAAAGAGCCAGAT TGGAGAAAGAGCTCAAGAAAGTTGAGAGATATATCCCATCNCATCCCCTAGAGCAAGAGAAGG TNCCCTAGAACAAGCGAAGGTTCCCAACGAGCCCAAAAATCTTGAGATGAGGCACCCAAGAATTAGAATTGAAG CCANAGGAGATAGATTTGAAAAGAATGGTTAGAAGAAGAGAGGATTATGACTATGGATAATTAGTCCCATGTCTGGGCTACAACACCAATATTACAAGAGCTTCCAGGAGGAGATCGTCACTCGACGATTTAATAGCTCGGGTTGACCTCGTATGTCTATTATTGGTTGTTCACGGACTATTATGTTTTGGCGAACCATGTTGAAGTCGTATAGAGAATTATGGTANCAC CCCCNNACCTTGTTAAATTGTTCGGACTGTTAATGGAACTGCATCCCTTATAGGCTTACTCCCC]




>consensus_3334#0
TCCTCGCTAGTTGTGGCGAGCCCCAAAACCAACTCCCAATCCGCATCTCCCTCCGCTGCG
CCGGCGCCGCCGCCCGCCGCCGCCGTGGCCCGGCCGTCGGCTCGCCTCCGCCTCCATCCT
CGGGCACCGGACGTCGTCCCCGCCGCCCGGAGGCCGACCCCTTTGCCTCCTTAGGCCTTC
TGCCCTAGTTCCGGCGGCCTGGCTCTAAATTCGGCCGCAGCCGGCGCAGGTCGATCACCG
CCCGCGCGCCATTGGAAGCGGAGGTGGAGAAAGGAAGCTGGCATTGGTGCGTGATTGAAA
TGCTGACCTGATTTTTTTTAGTACATTGAGGATTAGCGATGGATGGAGACAGTTGTTATG
TTAACTCACTGGTTGTTAAAATCAACTCGCCAGAGTGGGATGATGGCACCATGATGGGGG
CTAGTCCACCCGAGGAGCAACATTCAACGGTCGAAGAAGTTGTTGTCGTGAGACGAAACC
AGAAAAGAACAAAGAATTTCAGCGGGAAGGAAGACGAAGGGTTGGTTTCGGCATGGTTGA
ATGTTAGTAAGGATGTAGTCCAAGGCATCGAACAATCTCGTTGTGCATACTGGAAGAGAA
TTTACGATTACTTCCACGCAAACAAGGACTTCACCTCAGACCGTTCTCAAAATTCCCTCA
TGCACCGCTGGTCTACTATTCAAGAGAATGTGACCAAGTTCGAGGGTTGTCTAAGCCGGA
TTGGGGATAGAAAGCAAAGCTGGGTTTCAAGTCAAGATAAGATTATGCATGCATGTGCTC
TGTACAAGGCCGAAGATGAGAACCATAGGCCATTTCACATGATGCACTGTTGGAATCTCT
TGAGAAACCAGCAAAAATGGATTGATAGGTCGTCTCAGCTGCCATCTCACAAAAAACAGA
AGATAACCAACAATTCAAGTCTAGGTATGTCTACTACTACTACTGATGATACTGCGGCTG
CTCCTCCTCCTCCTCCAGGATTTGAGTTATCGAAGACTCCAGAAAGTATTAATGCTCCTC
CAAGATGTGAGTTATCTGAGAGACCAGAAAGTAGGAATGCTCCTCCAAGATGTGAGTTAT
CTGAGAGACCAGAAAATAGGAAGGGGGAGAAAGAAAAACTACGACGAGGTGGAGATGTGG
TCTTTGTGGAGGATTTAGATGATTTGTTGGCAAAGAAGAAAGAGGCAGATGTGGAGAAAG
AGCTCAAGAAAGATGAGAGATATATACAATCACATGCCCTAGAGCAAGAGAAGGTTGCAC
TAGAACAAGCGAAGGTTGCAAACGAGACAAAAAATCTTGAGATGAGGAGCAAAGAATTAG
AATTGAAGACCAAGGAGATAGATTTGAAAAGAATGTTAGAAGAAGAGAGGATTATGACTA
TGGATATTAGTGCCATGTCTGGGCTACAACAACAATATTACAAGAGCTTGCAGGAGGAGA
TCGTCACTCGACGATTTAATAGCTCGGGTTGACCTCGTATGTCTATTATTGTTGTTACGG
ACTATTATGTTTTGCGAACCATGTTGAAGTCGTATAGAGAATTATGGTAAACAGCCCNNA
CCTTGTTAAATTGTTCGGACTGTTAATGGAACTGCATCCCTTATAGGCTTACTCCCC
clustalw multiple alignements is not computed in this case