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Oryza sativa
cluster # 3361 cluster # 3361       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3361#0 length = 1041 sequences # 2  

consensusID : consensus_3361#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1041
fasta sequence
                              [CTAGCAGAGGCACATATTTTCAGAAACCAAGAACACACACTTCGCGGAGAGTAGTTTGGATCGGATCGGGATCGGGATCGGTGTGTCGAAGATGAACGATGCCGACGTCGGGAAGCAGATCCAGCAGATGGTCAGGTTCATCCTGCAGGAGGCCGAGGAGAAAGCCAGCGAGATCTCGGTGGCCGCGGAGGAGGAGTTCAACATAGAGAAGCTGCAGCTGGTGGAGTCGGAGAAGCGGAGGATCAGGCAGGACTACGAGCGCAAGGCGAAGCAGGTGGACGTTGGAAGGAAGATCGAGTACTCGACGCAGCTGAACGCGGCGCGGATCAAGGTGCTGCGGGCGCAGGACGGCGTGGTGGGCGAGATGAAGGAGGATGCCGGCAAGAGCCTCCTCCGCGTCACCAAGGACGCCACCGCCTACAGGAAGGTCCTCAAGGGCCTCATCGTGCAGAGCCTGCTCCGGCTGAGGGAGCCGTCGGTGGTGCTGCGGTGCCGGGAGGCGGATCGCGGGCACGTCGAGTCGGTGCTGGAGGCGGCGAAGAAGGAGTACGCCGAGAAGGCTAAGGTGAACCTCCCCAAGATCCTCATCGACGGCAAGGTCTACCTCCCGCCGCCCAAGACCGCCCGTGACGCCCATGGCCCCTTCTGCTCTGGAGGTGTGGTGATTGCATCGCAGGACGGCAAGATCGTCTGCGACAACACGCTGGATGCGAGGGTGGAAATCTCTTTCAAGCAAAAGCTTCCTGAGATCAGGAAGAAGCTCTTCAGCCAGAAAGTGTCACAATAAGCAATTTTTTCGGGTTCTTGATATCCAGGAATAAAACAAAGACGTGGTTCACAATATGTATATTTTTGTTGTATTTTGGAGTACTATTCCCTTCTGTCAGTTAAAGTGCACAGGCCGTGTATGCAACTAGTAAGGCCAAAAGTTCATTTCAGTGAAAGCAAATGTCTCGTTGTGTAAAACACTATATATATCTCTTTGTGTAAAACACCATGAGAAGTTGAGAACCCTTTGAGTTCATCACAAAACATTGATTG]

[+] EMBL AK100850             [CTAGCAGAGGCACATATTTTCAGAAACCAAGAACACACACTTCGCGGAGAGTAGTTTGGATCGGATCGGGATCGGGATCGGTGTGTCGAAGATGAACGATGCCGACGTCGGGAAGCAGATCCAGCAGATGGTCAGGTTCATCCTGCAGGAGGCCGAGGAGAAAGCCAGCGAGATCTCGGTGGCCGCGGAGGAGGAGTTCAACATAGAGAAGCTGCAGCTGGTGGAGTCGGAGAAGCGGAGGATCAGGCAGGACTACGAGCGCAAGGCGAAGCAGGTGGACGTTGGAAGGAAGATCGAGTACTCGACGCAGCTGAACGCGGCGCGGATCAAGGTGCTGCGGGCGCAGGACGGCGTGGTGGGCGAGATGAAGGAGGATGCCGGCAAGAGCCTCCTCCGCGTCACCAAGGACGCCACCGCCTACAGGAAGGTCCTCAAGGGCCTCATCGTGCAGAGCCTGCTCCGGCTGAGGGAGCCGTCGGTGGTGCTGCGGTGCCGGGAGGCGGATCGCGGGCACGTCGAGTCGGTGCTGGAGGCGGCGAAGAAGGAGTACGCCGAGAAGGCTAAGGTGAACCTCCCCAAGATCCTCATCGACGGCAAGGTCTACCTCCCGCCGCCCAAGACCGCCCGTGACGCCCATGGCCCCTTCTGCTCTGGAGGTGTGGTGATTGCATCGCAGGACGGCAAGATCGTCTGCGACAACACGCTGGATGCGAGGGTGGAAATCTCTTTCAAGCAAAAGCTTCCTGAGATCAGGAAGAAGCTCTTCAGCCAGAAAGTGTCACAATAAGCAATTTTTTCGGGTTCTTGATATCCAGGAATAAAACAAAGACGTGGTTCACAATATGTATATTTTTGTTGTATTTTGGAGTACTATTCCCTTCTGTCAGTTAAAGTGCACAGGCCGTGTATGCAACTAGTAAGGCCAAAAGTTCATTTCAGTGAAAGCAAATGTCTCGTTGTGTAAAACACTATATATATCTCTTTGTGTAAAACACCATGAGAAGTTGAGAACCCTTTGAGTTCATCACAAAACATTGATTG]
[+] EMBL CA767056             [                                                                                                                                                                                                                                                                                   TGGACGTTGGAAGGAAGATCGAGTACTCGACGCAGCTGAACGCGGCGCGGATCAAGGTGCTGCGGGCGCAGGACGGCGTGGTGGGCGAGATGAAGGAGGATGCCGGCAAGAGCCTCCTCCGCGTCACCAAGGACGCCACCGCCTACAGGAAGGTCCTCAAGGGCCTCATCGTGCAGAGCCTGCTCCGGCTGAGGGAGCCGTCGGTGGTGCTGCGGTGCCGGGAGGCGGATCGCGGGCACGTCGAGTCGGTGCTGGAGGCGGCGAAGAAGGAGTACGCCGAGAAGGCTAAGGTGAACCTCCCCAAGATCCTCATCGACGGCAAGGTCTACCTCCCGCCGCCCAAGACCGCCCGTGACGCCCATGGCCCCTTCTGCTCTGGAGGTGTGGTGATTGCATCGCAGGACGGCAAGATCGTCTGCGACAACACGCTGGATGCGAGGGTGGAAATCTCTTTCAAGCAAAAGCTTCCTGAGATCAGGAAGAAGCTCTTCAGCCAGAAAGTGTCACAATAAGCAATTTTTTCGGGTTCTTGATATCCAGGAATAAAACAAAGACGTGGTTCACAATATGTATATTTTTGTTGTATTTTGGAGTACTATTCCCTTCTGTCAGTTAAAGTGCACAGGCCGTGTATGCAACTAGTAANGNCAAAAGTTCATTTCAGTGAAAGCAAATGTCTCGn                                                                                    ]


>consensus_3361#0 CTAGCAGAGGCACATATTTTCAGAAACCAAGAACACACACTTCGCGGAGAGTAGTTTGGA TCGGATCGGGATCGGGATCGGTGTGTCGAAGATGAACGATGCCGACGTCGGGAAGCAGAT CCAGCAGATGGTCAGGTTCATCCTGCAGGAGGCCGAGGAGAAAGCCAGCGAGATCTCGGT GGCCGCGGAGGAGGAGTTCAACATAGAGAAGCTGCAGCTGGTGGAGTCGGAGAAGCGGAG GATCAGGCAGGACTACGAGCGCAAGGCGAAGCAGGTGGACGTTGGAAGGAAGATCGAGTA CTCGACGCAGCTGAACGCGGCGCGGATCAAGGTGCTGCGGGCGCAGGACGGCGTGGTGGG CGAGATGAAGGAGGATGCCGGCAAGAGCCTCCTCCGCGTCACCAAGGACGCCACCGCCTA CAGGAAGGTCCTCAAGGGCCTCATCGTGCAGAGCCTGCTCCGGCTGAGGGAGCCGTCGGT GGTGCTGCGGTGCCGGGAGGCGGATCGCGGGCACGTCGAGTCGGTGCTGGAGGCGGCGAA GAAGGAGTACGCCGAGAAGGCTAAGGTGAACCTCCCCAAGATCCTCATCGACGGCAAGGT CTACCTCCCGCCGCCCAAGACCGCCCGTGACGCCCATGGCCCCTTCTGCTCTGGAGGTGT GGTGATTGCATCGCAGGACGGCAAGATCGTCTGCGACAACACGCTGGATGCGAGGGTGGA AATCTCTTTCAAGCAAAAGCTTCCTGAGATCAGGAAGAAGCTCTTCAGCCAGAAAGTGTC ACAATAAGCAATTTTTTCGGGTTCTTGATATCCAGGAATAAAACAAAGACGTGGTTCACA ATATGTATATTTTTGTTGTATTTTGGAGTACTATTCCCTTCTGTCAGTTAAAGTGCACAG GCCGTGTATGCAACTAGTAAGGCCAAAAGTTCATTTCAGTGAAAGCAAATGTCTCGTTGT GTAAAACACTATATATATCTCTTTGTGTAAAACACCATGAGAAGTTGAGAACCCTTTGAG TTCATCACAAAACATTGATTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)