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Oryza sativa
cluster # 3447 cluster # 3447       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3447#0 length = 1046 sequences # 2  

consensusID : consensus_3447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1046
fasta sequence
                              [CGCGACGCCGCGCCGCCCCGCCCCGCCCGATCGCCGCCGCACTCGCCGCCCGTCCGCCTCGCCGCAACGCACCGCGCCACCGCGCCGCGCCAGCCTGAGGGAGAGAGAGAGACGCCGAGGTTTGAGGTTGGTGAGGGAGCTGAGGCGGCGGGAGAAGGAGGAGGAGCGAGAGCGAGGGAGAGAGATCGATGGCGAGGTTCGAGGTGTACGAGAACAACGGCGGCACGTGCGTGGCCGTCGCCGGCGCCGACTACTGCGTGGTCGCCGCCGACACGCGCCTCTCCGTCGGATACAGCATCCTCAGCCGCGACAGCTCCAAGATCGCCCACCTAGCGGATAAATGTGTTTTGGCCTCATCTGGATTTCAAGGTGATGTTAAAGCTTTGCAGAGGAACCTTACTGCCAAGGAATTGCTTTATGAACACAACCATAACAAGAAAATGAGCTGCCCTGCGATGGCGCAATTACTGTCCAACACGCTCTACTACAAAAGGTTCTTCCCATACTATGCCTTCAATGTGTTGGGTGGACTTGACAGCGAAGGTAAAGGATGTGTCTTCACATATGATGCTGTTGGGTCTTATGAAAGGACAGGTTATAGTGCTCAGGGGACAGGTGCAGCTTTGATGATGCCTGTTCTGGACAATCAGCTAAAATCTCCTAGCCCATTACTACTTCCAGCTCGGGATGCAGTGACACCATTATCTCAATCAGATGCTGTCGATCTGGTTAAGGACGTTTTTGCATCAGCCACAGAACGAGACATATACACTGGAGATAAACTGGAGATTGTTGTCATCAACAGCGCCGGCTCTCACCGTGAGTTCATTGAGCTAAGGAAGGATTAGCGTGGGATACTATCAAACCACCTCGTACCTGTGCAACAACAATACCATTCAGTTACTAGCAGAATGTGCCTTTTCCTTGCCAGATGTATTTAAATTACCGTTGTATTATTCAGTGTTCACCATTATTACGGAAGTGGTTACGTAAGACATTTTGTAGTCTTTCTATCTGAACTATGCGTATCTGAATTGCTCACTGAA]

[+] EMBL AK071019             [CGCGACGCCGCGCCGCCCCGCCCCGCCCGATCGCCGCCGCACTCGCCGCCCGTCCGCCTCGCCGCAACGCACCGCGCCACCGCGCCGCGCCAGCCTGAGGGAGAGAGAGAGACGCCGAGGTTTGAGGTTGGTGAGGGAGCTGAGGCGGCGGGAGAAGGAGGAGGAGCGAGAGCGAGGGAGAGAGATCGATGGCGAGGTTCGAGGTGTACGAGAACAACGGCGGCACGTGCGTGGCCGTCGCCGGCGCCGACTACTGCGTGGTCGCCGCCGACACGCGCCTCTCCGTCGGATACAGCATCCTCAGCCGCGACAGCTCCAAGATCGCCCACCTAGCGGATAAATGTGTTTTGGCCTCATCTGGATTTCAAGGTGATGTTAAAGCTTTGCAGAGGAACCTTACTGCCAAGGAATTGCTTTATGAACACAACCATAACAAGAAAATGAGCTGCCCTGCGATGGCGCAATTACTGTCCAACACGCTCTACTACAAAAGGTTCTTCCCATACTATGCCTTCAATGTGTTGGGTGGACTTGACAGCGAAGGTAAAGGATGTGTCTTCACATATGATGCTGTTGGGTCTTATGAAAGGACAGGTTATAGTGCTCAGGGGACAGGTGCAGCTTTGATGATGCCTGTTCTGGACAATCAGCTAAAATCTCCTAGCCCATTACTACTTCCAGCTCGGGATGCAGTGACACCATTATCTCAATCAGATGCTGTCGATCTGGTTAAGGACGTTTTTGCATCAGCCACAGAACGAGACATATACACTGGAGATAAACTGGAGATTGTTGTCATCAACAGCGCCGGCTCTCACCGTGAGTTCATTGAGCTAAGGAAGGATTAGCGTGGGATACTATCAAACCACCTCGTACCTGTGCAACAACAATACCATTCAGTTACTAGCAGAATGTGCCTTTTCCTTGCCAGATGTATTTAAATTACCGTTGTATTATTCAGTGTTCACCATTATTACGGAAGTGGTTACGTAAGACATTTTGTAGTCTTTCTATCTGAACTATGCGTATCTGAATTGCTCACTGAA]
[+] EMBL CA999332             [                                                                                                                                                                                                                                                                                                                                                      GTGTTTTGGCCTCATCTGGATTTCAAGGTGATGTTAAAGCTTTGCAGAGGAACCTTACTGCCAAGGAATTGCTTTATGAACACAACCATAACAAGAAAATGAGCTGCCCTGCGATGGCGCAATTACTGTCCAACACGCTCTACTACAAAAGGTTCTTCCCATACTATGCCTTCAATGTGTTGGGTGGACTTGACAGCGAAGGTAAAGGATGTGTCTTCACATATGATGCTGTTGGGTCTTATGAAAGGACAGGTTATAGTGCTCAGGGGACAGGTGCAGCTTTGATGATGCCTGTTCTGGACAATCAGCTAAAATCTCCTAGCCCATTACTACTTCCAGCTCGGGATGCAGTGACACCATTATCTCAATCAGATGCTGTCGATCTGGTTAAGGACGTTTTTGCAT                                                                                                                                                                                                                                                                                                           ]


>consensus_3447#0 CGCGACGCCGCGCCGCCCCGCCCCGCCCGATCGCCGCCGCACTCGCCGCCCGTCCGCCTC GCCGCAACGCACCGCGCCACCGCGCCGCGCCAGCCTGAGGGAGAGAGAGAGACGCCGAGG TTTGAGGTTGGTGAGGGAGCTGAGGCGGCGGGAGAAGGAGGAGGAGCGAGAGCGAGGGAG AGAGATCGATGGCGAGGTTCGAGGTGTACGAGAACAACGGCGGCACGTGCGTGGCCGTCG CCGGCGCCGACTACTGCGTGGTCGCCGCCGACACGCGCCTCTCCGTCGGATACAGCATCC TCAGCCGCGACAGCTCCAAGATCGCCCACCTAGCGGATAAATGTGTTTTGGCCTCATCTG GATTTCAAGGTGATGTTAAAGCTTTGCAGAGGAACCTTACTGCCAAGGAATTGCTTTATG AACACAACCATAACAAGAAAATGAGCTGCCCTGCGATGGCGCAATTACTGTCCAACACGC TCTACTACAAAAGGTTCTTCCCATACTATGCCTTCAATGTGTTGGGTGGACTTGACAGCG AAGGTAAAGGATGTGTCTTCACATATGATGCTGTTGGGTCTTATGAAAGGACAGGTTATA GTGCTCAGGGGACAGGTGCAGCTTTGATGATGCCTGTTCTGGACAATCAGCTAAAATCTC CTAGCCCATTACTACTTCCAGCTCGGGATGCAGTGACACCATTATCTCAATCAGATGCTG TCGATCTGGTTAAGGACGTTTTTGCATCAGCCACAGAACGAGACATATACACTGGAGATA AACTGGAGATTGTTGTCATCAACAGCGCCGGCTCTCACCGTGAGTTCATTGAGCTAAGGA AGGATTAGCGTGGGATACTATCAAACCACCTCGTACCTGTGCAACAACAATACCATTCAG TTACTAGCAGAATGTGCCTTTTCCTTGCCAGATGTATTTAAATTACCGTTGTATTATTCA GTGTTCACCATTATTACGGAAGTGGTTACGTAAGACATTTTGTAGTCTTTCTATCTGAAC TATGCGTATCTGAATTGCTCACTGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)