cluster # 3520

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Oryza sativa
cluster # 3520 cluster # 3520 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3520#0 length = 696 sequences # 2

consensusID : consensus_3520#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 696
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCAATTAATAACAGCATTAATAATATTAACTCATTACACTAGACATCACTGCCTCATTTCAGGACAAGAAAGGGAAATTTGAGGGCACGAGTTTCTTGTTAATATCAAAGGGTTACTCATCTCAAAAAAAATCCTAAAAGCATCACGTTCTGTCAACCTATTGGGCTGACATGAATATGTTCCTCCTGCTACCTACTTAAGGGTTAAGGCTCAGTTCTTGATTTAATACGGACACAACCACAGAAGGGTATCCTCTTCTTCTTCGTCTTCTGTCCGGCATCATTTTTGCCCTTCCTTGCAGCCATATAATCCCTCAAAAAAACGCGTGAACGTTTCTCAGGGGCTTTAACTCTTTTGGACTCATGCTCCTCTTCAAGCTTCAACAAGACATACTGTATCTTCTGAAGTTCCAATTCCAACTTTGCGACCTTTTCTGATCCTTTCTGCACTTGCTCTGAAATTTTTCTTCTGCTGGAATAGCCTTCTAGTTCAGCACTCACCTCAGATGCAGGGTAATTCTCAGCCTTCTTTGTCACATTACAGTTGAAATCTATCTGCTCCAAGACAGAGCCATCAATCTCCTGCAGCTGAGCTCTAATGCTGCTGTATTCAAAGCTTACGGGAG-ATTTTCCCTTA-AAACACCCCCCATTTTCTGNTTTAATTTCT]

[+] EMBL CA762002             [TTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCAATTAATAACAGCATTAATAATATTAACTCATTACACTAGACATCACTGCCTCATTTCAGGACAAGAAAGGGAAATTTGAGGGCACGAGTTTCTTGTTAATATCAAAGGGTTACTCATCTCAAAAAAAATCCTAAAAGCATCACGTTCTGTCAACCTATTGGGCTGACATGAATATGTTCCTCCTGCTACCTACTTAAGGGTTAAGGCTCAGTTCTTGATTTAATACGGACACAACCACAGAAGGGTATCCTCTTCTTCTTCGTCTTCTGTCCGGCATCATTTTTGCCCTTCCTTGCAGCCATATAATCCCTCAAAAAAACGCGTGAACGTTTCTCAGGGGCTTTAACTCTTTTGGACTCATGCTCCTCTTCAAGCTTCAACAAGACATACTGTATCTTCTGAAGTTCCAATTCCAACTTTGCGACCTTTTCTGATCCTTTCTGCACTTGCTCTGAAATTTTTCTTCTGCTGGAATAGCCTTCTAGTTCAGCACTCACCTCAGATGCAGGGTAATTCTCAGCCTTCTTTGTCACATTACAGTTGAAATCTATCTGCTCCAAGACAGAGCCATCAATCTCCTGCAGCTGAGCTCTAATGCTGCTGTATTCAAAGCTTACGGGAG ATTTTCCCTTA AAACACCCCCCATTT               ]
[-] EMBL AU092077             [                  TTTTTTTTTGCTTCAATTAATAACAGCATTAATAATATTAACTCATTACACTAGACATCACTGCCTCATTTCAGGACAAGAAAGGGAAATTTGAGTGCACGAGTTTCTTGTTAATATCATAGTGTTACTCATCTCAGAAGAGATCCTAAGAGCATCACGTTCTGTCAACCTATTGGGCTGACATGAATATGTTCCTCCTGCTACCTACTTAATGGTTAAGGCTCAGTTCTTGATTTAATACGGACACAACCACAGAAGGGTATCCTCTTCTTCTTCGTCTTCTGTCCGGCATCATTTTTGTCCTTCCTTGCAGTCATATAATCCCTCAAAAGAACGCGTGAACGTTTCTCAGGGGCTTTAACTCTTTTGTACTCATGCTCCTCTTCAAGCTTCAACAAGACATACTGTATCTTCTGAAGTTCCAATTCCAACTTTGCGACCTTTTCTGATCCTTTCTGCACTTGCTCTGAGATTTTTCTTCTGCTGGAATAGCCTTCTAGTTCAGCACTCACCTCAAATGCAGGGTAATTCTCAGCCTTCTTTGNCACATTACAGTTGAAATCTATCTGCTCCAAGACAGAGCCATCAATCTCCTGCAGCTGAGCTCTGATGCTGCTGGATTCAGAGCTTACGGTAGAATTTTCCCTTAGAAGCACCCACCATTTTCTGNTTTAATTTCT]




>consensus_3520#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCAATTAATAACAGCATTAATAATATTAAC
TCATTACACTAGACATCACTGCCTCATTTCAGGACAAGAAAGGGAAATTTGAGGGCACGA
GTTTCTTGTTAATATCAAAGGGTTACTCATCTCAAAAAAAATCCTAAAAGCATCACGTTC
TGTCAACCTATTGGGCTGACATGAATATGTTCCTCCTGCTACCTACTTAAGGGTTAAGGC
TCAGTTCTTGATTTAATACGGACACAACCACAGAAGGGTATCCTCTTCTTCTTCGTCTTC
TGTCCGGCATCATTTTTGCCCTTCCTTGCAGCCATATAATCCCTCAAAAAAACGCGTGAA
CGTTTCTCAGGGGCTTTAACTCTTTTGGACTCATGCTCCTCTTCAAGCTTCAACAAGACA
TACTGTATCTTCTGAAGTTCCAATTCCAACTTTGCGACCTTTTCTGATCCTTTCTGCACT
TGCTCTGAAATTTTTCTTCTGCTGGAATAGCCTTCTAGTTCAGCACTCACCTCAGATGCA
GGGTAATTCTCAGCCTTCTTTGTCACATTACAGTTGAAATCTATCTGCTCCAAGACAGAG
CCATCAATCTCCTGCAGCTGAGCTCTAATGCTGCTGTATTCAAAGCTTACGGGAGATTTT
CCCTTAAAACACCCCCCATTTTCTGNTTTAATTTCT

clustalw multiple alignements is not computed in this case