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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3548 cluster # 3548       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3548#0 length = 799 sequences # 2  

consensusID : consensus_3548#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 799
fasta sequence
                              [ATACTCCATATGTTTATAGTTGTCGTCATTTGCTAAATGGAATTACAAACATATTGCTCAAATAATACATACATGAAACATGTTAAGCTGACTATGCTTACATGCTGAAACTAATTTCTATTGGAGCAGAACAGGAACAAGGCCACCAGCAAACTAGCCTTCAGCTTGACACTCCATGGGATACCATAGCTTCCCTTGCCCACTAGCCCTCTCACAAATGGCAATAAGCACAGTAGCAGCCATCCACAAGACATGAATTCACTTATACCCGGACCACCAGGCACGTCTTCTGTTGTCCCAAAAACTGCCCTCCATGTACCAATTGTGATTGCAACAATGTTCAACATTGTCAGCGCCGTAACGGGGATGAACACTGGTGATGCGTCAAAGGTGAATCTCTCCGGGTCAACCTCATCGTTTTGGCCATTGCCATCCGATGTGCTCTTCTCCTTACGGGTGACCTCGAACACAGTCTCGGAGAGGCCTATGGTCTTGAGGAGCACAGTAAAAAATGCTAGTAGCCATGCAGAGGCTGAAATGATCCGTTGCATTCTGTGGTTGTTCCACCAGGCACGTACAGAGAGCCCACATTCCATGTACTCCACGAAGTTGTATGTATTATAGGTCAAGAATAGTGCTAATGTGATGTTGAAACAATTTTCTGATGCCTTTGACAAGAAGGATTGATTTGTGAGTAGGCAATAAGGAACCAACAATTCATAGCATAGCTCAACAAATCCCCTCACAGCCCACACATAAAGAGTCAGGTACGCAAGGCATTGTCGGAATTGGAGATGCT]

[+] EMBL CB619433             [ATACTCCATATGTTTATAGTTGTCGTCATTTGCTAAATGGAATTACAAACATATTGCTCAAATAATACATACATGAAACATGTTAAGCTGACTATGCTTACATGCTGAAACTAATTTCTATTGGAGCAGAACAGGAACAAGGCCACCAGCAAACTAGCCTTCAGCTTGACACTCCATGGGATACCATAGCTTCCCTTGCCCACTAGCCCTCTCACAAATGGCAATAAGCACAGTAGCAGCCATCCACAAGACATGAATTCACTTATACCCGGACCACCAGGCACGTCTTCTGTTGTCCCAAAAACTGCCCTCCATGTACCAATTGTGATTGCAACAATGTTCAACATTGTCAGCGCCGTAACGGGGATGAACACTGGTGATGCGTCAAAGGTGAATCTCTCCGGGTCAACCTCATCGTTTTGGCCATTGCCATCCGATGTGCTCTTCTCCTTACGGGTGACCTCGAACACAGTCTCGGAGAGGCCTATGGTCTTGAGGAGCACAGTAAAAAATGCTAGTAGCCATGCAGAGGCTGAAATGATCCGTTGCATTCTGTGGTTGTTCCACCAGGCACGTACAGAGAGCCCACATTCCATGTACTCCACGAAGTTGTATGTATTATAGGTCAAGAATAGTGCTAATGTGATGTTGAAACAATTTTCTGATGCCTTTGACAAGAAGGATTGATTTGTGAGTAGGCAATAAGGAACCAACAATTCATAGCATAGCTCAACAAATCCCCTCACA                                                    ]
[+] EMBL CB624123             [                      TCGTCATTTGCTAAATGGAATTACAAACATATTGCTCAAATAATACATACATGAAACATGTTAAGCTGACTATGCTTACATGCTGAAACTAATTTCTATTGGAGCAGAACAGGAACAAGGCCACCAGCAAACTAGCCTTCAGCTTGACACTCCATGGGATACCATAGCTTCCCTTGCCCACTAGCCCTCTCACAAATGGCAATAAGCACAGTAGCAGCCATCCACAAGACATGAATTCACTTATACCCGGACCACCAGGCACGTCTTCTGTTGTCCCAAAAACTGCCCTCCATGTACCAATTGTGATTGCAACAATGTTCAACATTGTCAGCGCCGTAACGGGGATGAACACTGGTGATGCGTCAAAGGTGAATCTCTCCGGGTCAACCTCATCGTTTTGGCCATTGCCATCCGATGTGCTCTTCTCCTTACGGGTGACCTCGAACACAGTCTCGGAGAGGCCTATGGTCTTGAGGAGCACAGTAAAAAATGCTAGTAGCCATGCAGAGGCTGAAATGATCCGTTGCATTCTGTGGTTGTTCCACCAGGCACGTACAGAGAGCCCACATTCCATGTACTCCACGAAGTTGTATGTATTATAGGTCAAGAATAGTGCTAATGTGATGTTGAAACAATTTTCTGATGCCTTTGACAAGAAGGATTGATTTGTGAGTAGGCAATAAGGAACCAACAATTCATAGCATAGCTCAACAAATCCCCTCACAGCCCACACATAAAGAGTCAGGTACGCAAGGCATTGTCGGAATTGGAGATGCT]


>consensus_3548#0 ATACTCCATATGTTTATAGTTGTCGTCATTTGCTAAATGGAATTACAAACATATTGCTCA AATAATACATACATGAAACATGTTAAGCTGACTATGCTTACATGCTGAAACTAATTTCTA TTGGAGCAGAACAGGAACAAGGCCACCAGCAAACTAGCCTTCAGCTTGACACTCCATGGG ATACCATAGCTTCCCTTGCCCACTAGCCCTCTCACAAATGGCAATAAGCACAGTAGCAGC CATCCACAAGACATGAATTCACTTATACCCGGACCACCAGGCACGTCTTCTGTTGTCCCA AAAACTGCCCTCCATGTACCAATTGTGATTGCAACAATGTTCAACATTGTCAGCGCCGTA ACGGGGATGAACACTGGTGATGCGTCAAAGGTGAATCTCTCCGGGTCAACCTCATCGTTT TGGCCATTGCCATCCGATGTGCTCTTCTCCTTACGGGTGACCTCGAACACAGTCTCGGAG AGGCCTATGGTCTTGAGGAGCACAGTAAAAAATGCTAGTAGCCATGCAGAGGCTGAAATG ATCCGTTGCATTCTGTGGTTGTTCCACCAGGCACGTACAGAGAGCCCACATTCCATGTAC TCCACGAAGTTGTATGTATTATAGGTCAAGAATAGTGCTAATGTGATGTTGAAACAATTT TCTGATGCCTTTGACAAGAAGGATTGATTTGTGAGTAGGCAATAAGGAACCAACAATTCA TAGCATAGCTCAACAAATCCCCTCACAGCCCACACATAAAGAGTCAGGTACGCAAGGCAT TGTCGGAATTGGAGATGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)