cluster # 3549

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Oryza sativa
cluster # 3549 cluster # 3549 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3549#0 length = 1026 sequences # 2

consensusID : consensus_3549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1026
fasta sequence

                              [GCCCAAAGCCAAGCGCCTCGGCTCGCTCTCGCCGCCTCGCCGCGCGCCGCGCGCTCGCCATGGAGATCGGTGGCGTGCTCGTGTCGCTGCTCTTCGCCGCCTTCTCCCTCCCCTGCCTCCTCCTCCTCCTCGTCCTCGCCGAGGCCGGCCTCCGCCTCGCCTCCCTCGCGCTCCGCGGCGGCCGCTACGCCTGGCCCACCCGCTCCGACTTCCTCGGCTACCGCATCGCCCGCCGCCGCCGCGCCGCCGTCTCCGGCGGCGCCGGCGGGGCGGACGGCGAGGAGGAGGCGCAGCCGACGGCGGAGTGCTGCGACCGCCTTGCCGTGGCGATGTACCGGCGCGGGCGCGACGCGGCTCCCGTGGACTGCGTGTTCTGCCTGTCGCGGGTGGACGACGGCGAGGAGGTCCGCGAGCTCCGGTGCCGCCACGTCTTCCACCGCGCCTGCCTCGACGCCTGGCTCGTCCTCCCGCGCGCCACCTGCCCGCTCTGCCGCGACTGCCTCCTCCCGCCGCCGTGCGAGCCGCCGCGCAGCTTCCCGCTCGACTACTACGACGACGACGACGACGTCCACTTCGGCTTCAACGACTTCTCCATCACCTCCTCCACCACCACCACCACCTCCGCCGCCGCCGCCGTCGCCTACCCACACGGCGTCGCGCTCTGGCCCATGTAATAAATGTAATAATCGCCA-TTGCTGCCGCTGCCGGCTGCCGCCATGCGAGAAGCCGAGGAGCAGAGTGTTCTCTCTGTTTTTCTTCTTCTTTTTTTTTGGTTTCTTTTTGCATAGTTTTTTTTAGTAATTAGTTGCTAATTAATTTGGGACTGATTGCTTGATTAATCTAATGTAATCTAAGATGATCTGGCTAGGTGGCCCATGTAAAGTAATGTAATAATCTCCAATTCTCCATTGTTGCTGCCACACGAGAGAAGCCGAGAAACACACAGGGATCTTTTGGCTAGCTTTACGAGGTGATAGGCTAGACGATTTGAATTTGAAGCCTCGTTCTTTCTAGCTAAAAAAAAAA]

[+] EMBL AK063246             [GCCCAAAGCCAAGCGCCTCGGCTCGCTCTCGCCGCCTCGCCGCGCGCCGCGCGCTCGCCATGGAGATCGGTGGCGTGCTCGTGTCGCTGCTCTTCGCCGCCTTCTCCCTCCCCTGCCTCCTCCTCCTCCTCGTCCTCGCCGAGGCCGGCCTCCGCCTCGCCTCCCTCGCGCTCCGCGGCGGCCGCTACGCCTGGCCCACCCGCTCCGACTTCCTCGGCTACCGCATCGCCCGCCGCCGCCGCGCCGCCGTCTCCGGCGGCGCCGGCGGGGCGGACGGCGAGGAGGAGGCGCAGCCGACGGCGGAGTGCTGCGACCGCCTTGCCGTGGCGATGTACCGGCGCGGGCGCGACGCGGCTCCCGTGGACTGCGTGTTCTGCCTGTCGCGGGTGGACGACGGCGAGGAGGTCCGCGAGCTCCGGTGCCGCCACGTCTTCCACCGCGCCTGCCTCGACGCCTGGCTCGTCCTCCCGCGCGCCACCTGCCCGCTCTGCCGCGACTGCCTCCTCCCGCCGCCGTGCGAGCCGCCGCGCAGCTTCCCGCTCGACTACTACGACGACGACGACGACGTCCACTTCGGCTTCAACGACTTCTCCATCACCTCCTCCACCACCACCACCACCTCCGCCGCCGCCGCCGTCGCCTACCCACACGGCGTCGCGCTCTGGCCCATGTAATAAATGTAATAATCGCCA TTGCTGCCGCTGCCGGCTGCCGCCATGCGAGAAGCCGAGGAGCAGAGTGTTCTCTCTGTTTTTCTTCTTCTTTTTTTTTGGTTTCTTTTTGCATAGTTTTTTTTAGTAATTAGTTGCTAATTAATTTGGGACTGATTGCTTGATTAATCTAATGTAATCTAAGATGATCTGGCTAGGTGGCCCATGTAAAGTAATGTAATAATCTCCAATTCTCCAT                                                                                                                     ]
[+] EMBL AU070319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCGCGCTCTGGCCCATGTAATAAATGTAATAATCGCCATTTGCTGCCGCTGACCGCTGCCGCCATGCGAGAAGCCGAGGAGCAGAGTGTTCTCTCTGTTTTTCTTCTTCTTTTTTTTTGGTTTCNTTTTGCATAG TTTTTTTAGTAATTAGTTGCTAATTAATTTGGGACTGATTGCTTGATTAATCTAATGTAATCTAAGATGATCTGGCTAGGTGGCCCATGTAAAGTAATGTAATAATCTCCAATTCTCCATTGTTGCTGCCACACGAGAGAAGCCGAGAAACACACAGGGATCTTTTGGCTAGCTTTACGAGGTGATAGGCTAGACGATTTGAATTTGAAGCCTCGTTCTTTCTAGCTAAAAAAAAAA]




>consensus_3549#0
GCCCAAAGCCAAGCGCCTCGGCTCGCTCTCGCCGCCTCGCCGCGCGCCGCGCGCTCGCCA
TGGAGATCGGTGGCGTGCTCGTGTCGCTGCTCTTCGCCGCCTTCTCCCTCCCCTGCCTCC
TCCTCCTCCTCGTCCTCGCCGAGGCCGGCCTCCGCCTCGCCTCCCTCGCGCTCCGCGGCG
GCCGCTACGCCTGGCCCACCCGCTCCGACTTCCTCGGCTACCGCATCGCCCGCCGCCGCC
GCGCCGCCGTCTCCGGCGGCGCCGGCGGGGCGGACGGCGAGGAGGAGGCGCAGCCGACGG
CGGAGTGCTGCGACCGCCTTGCCGTGGCGATGTACCGGCGCGGGCGCGACGCGGCTCCCG
TGGACTGCGTGTTCTGCCTGTCGCGGGTGGACGACGGCGAGGAGGTCCGCGAGCTCCGGT
GCCGCCACGTCTTCCACCGCGCCTGCCTCGACGCCTGGCTCGTCCTCCCGCGCGCCACCT
GCCCGCTCTGCCGCGACTGCCTCCTCCCGCCGCCGTGCGAGCCGCCGCGCAGCTTCCCGC
TCGACTACTACGACGACGACGACGACGTCCACTTCGGCTTCAACGACTTCTCCATCACCT
CCTCCACCACCACCACCACCTCCGCCGCCGCCGCCGTCGCCTACCCACACGGCGTCGCGC
TCTGGCCCATGTAATAAATGTAATAATCGCCATTGCTGCCGCTGCCGGCTGCCGCCATGC
GAGAAGCCGAGGAGCAGAGTGTTCTCTCTGTTTTTCTTCTTCTTTTTTTTTGGTTTCTTT
TTGCATAGTTTTTTTTAGTAATTAGTTGCTAATTAATTTGGGACTGATTGCTTGATTAAT
CTAATGTAATCTAAGATGATCTGGCTAGGTGGCCCATGTAAAGTAATGTAATAATCTCCA
ATTCTCCATTGTTGCTGCCACACGAGAGAAGCCGAGAAACACACAGGGATCTTTTGGCTA
GCTTTACGAGGTGATAGGCTAGACGATTTGAATTTGAAGCCTCGTTCTTTCTAGCTAAAA
AAAAAA

clustalw multiple alignements is not computed in this case