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Oryza sativa
cluster # 365 cluster # 365       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_365#0 length = 3024 sequences # 1  
 consensus_365#1 length = 777 sequences # 1  
consensusID : consensus_365#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3024
fasta sequence 
                              [CCCCTCGCCCGCGCGGGAAAACCATAAAAAACTGCGCCGCCGCCCAAACCGCCTCCTCCTCCTTCCCCCGCAAGCCTCTCCCCCTTCCCCCCCCCTCTCTCCCGCCGCCCTCGCGCTCCTCCATCGCCGATGCCTCGCCCCCGCTCGGGCGCGGACACCGCGAGTGCATCCGCGGGGGTCACACTTCCGCCGTCGCCGTCGCCGCCGCCGCCGACGGAGATGGCGGGCGGGTCGTCGGCGGGGACTCCGTGGCCGTCCCCGTCCACCGCCCTCACCCTCGGCCTCGGCCTCGGCCCCCCCGCCGCCGACGGATCCCTCAAGTCCCCCGGCCTGGCGCCGCCGCCTCGCCGCAGCCTGCGCCTCGCCTCCGGGGCGGTGGCATCCGGCGTCGCGAGCCCGACCACTACCCCGGCGTCGTCCGCTCCTGCTGCGGGGGCCGATGGCGCTTCCTCCGGCTCTGGTTCCGCGTCGTCCGGGAGGAGGAAGGGGAGGGCACAAGCGATTCCTGCCCCCGTTGCTTCTCCGACCAGCGCTGGTGAGTTTGGGGGCGGCGGCGAAGTTAGGGTTTGGGGCGGCGGTAATCGTAGTGGTGAAGCGGCATTCATAAGCTTGCAATCGGGGTCTAGGGTTGCGAAACGGTCGATGGAGCTTGGTGTTCAAATGGGTGGGGAGATGGGTCTCGGATCGAATGGAGGTGGCGGGGCTGGAGGCCAGGTGCATGATGAAATGCCACACCGGAATGTGGATAGTTCGGGGAAGCGTCGTAAGATAGGGATGGAGATCCCATACGTCTCTGATTCAGAGAGTGACAATGATGATGACTGCATACTTCCAGGGGAGGATGGCAGTAGGATGCCGGTACAGTTATGCGCTGCTTCTGATTTGATTGAACTGAATCTGTTCACCATGAGCATGGGCAGGACAGATGAAGGGAGAATGGGTGATTCTGTGAAGACAGGTAAAAAGAAAGCTAGTGGAGTTACTATTCGAGAAAATGACATCCCCATTGACGAGCATGTGCACGGACAGAGTTCGGCAATTGGTGAGAGTATTGAGCTATTAGCATCTCCTATGCGAAGTGCATTAGGCGAAAACCATGCAGGTATGTATTCCACAGAAGAGGAGAGAAGGCAGAAGGCTAGGTATGATGTTAAAGGCAAAGGGAAGCTGTATTTGGGGAACGATGATTCTGGTGCTGGTACCGGGATTGGTAAGTTTAGTCCCGATAGTAAAGGAAAGGCTAAGATGGTTGTGGAAGAGAGTTCATTGTCTGTTAGCTCAGGTGCGGATCAAATGGATTTGAACTCAGTGATTTCTGAAGAGGTGCAGAGTTTCCCAGCAGATCATTGGGAACCACGTCGGAGAGAAAGGGCAAGACAGAGAGCTATTGAAATGGCTCCTAGGTTTGCATTCTTCAAAGCAGATGAAGATGGACATAGTGATGATGGTGATGATGATGATGACAATGCAGAAGAGTTGGAACCGGTTCCTGATCCTCAGGACTGGCCAGGTCCATTTTCAACTGCAATGAGGATCATTACTGACAGAGAAGCTAAACTGAGAGCTCGGGAGTTGAATTCTTCCAACTTGAACAAGTCTGCTAATAAGGTCATTTCGTGGATACCTTCCAAAGATAGGAAATCTCCACTGCGATCTGCTCCATCGCTTACTAGCTTGTGCTTGCAAACTCTTTCAAATAATGCTGAAGCTATCGAATCACTTGCTGGCATTCCAGATGAGCTAAAAAATAGACTCTTATCTAGTCTATGCCATTCTAGAAAGATGAATGCCCATCTTCTTGGTGAACTCATGTGTGATAATCCTGTGACAGTGCAACTCAGTGAGTGTTCATGGTTGAGTGAGGATGACTTTGAGACCATTTTTGGGAAATGCAGGACAGAAATCTTGCAGGTTTTGCAGCTTGACTTATCTGGGCGATGCATGCCTGACTACATGTTGCCTGCTACCTTAGCAAAGGTTCCTAACAGCATGCCATTATTGAAAAAAATATCTCTGAAGGGAAATACCGTCTTTCTGATAGTGGGTTAGACACAATAATCTCTGCAGCCCCTTCTCTGAGTTCGCTAAATTTGTGCGAGTGTCCTCTTCTCACTTCAACTGGAATCGAGAATCTTGCTAACAAGTTGACTTTACTCCTTACGGAACTATATATTGATGACTGCTTAAACGTGGATGCCATGATGATTCTTCCTTCCTTACAAAAGATTAAGCATTTAGAGGTTTCATCAATGTCTGGCATACAACCTGTCAGCAATAAGTTTGTCAATGAGCTTATTCCTGTACACGGTTCAAATCTGAAGGAGTTGGCATTTGCTGGTTGCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAGATGCGGGGATTCAGCAATGAGACATCTTCGCAATGGTTGCCGGCTTATAAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACAATTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGGGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGATGTCGAAGCCCCTGAAGGTGGCTGTAGCTTCTGGCAGGGAATATTTTTGCAAGCCTACCCTGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTCGAGTGTTTAACATTCGTTCATGTTATGAAAAATCCA]

[+] EMBL AK121795             [CCCCTCGCCCGCGCGGGAAAACCATAAAAAACTGCGCCGCCGCCCAAACCGCCTCCTCCTCCTTCCCCCGCAAGCCTCTCCCCCTTCCCCCCCCCTCTCTCCCGCCGCCCTCGCGCTCCTCCATCGCCGATGCCTCGCCCCCGCTCGGGCGCGGACACCGCGAGTGCATCCGCGGGGGTCACACTTCCGCCGTCGCCGTCGCCGCCGCCGCCGACGGAGATGGCGGGCGGGTCGTCGGCGGGGACTCCGTGGCCGTCCCCGTCCACCGCCCTCACCCTCGGCCTCGGCCTCGGCCCCCCCGCCGCCGACGGATCCCTCAAGTCCCCCGGCCTGGCGCCGCCGCCTCGCCGCAGCCTGCGCCTCGCCTCCGGGGCGGTGGCATCCGGCGTCGCGAGCCCGACCACTACCCCGGCGTCGTCCGCTCCTGCTGCGGGGGCCGATGGCGCTTCCTCCGGCTCTGGTTCCGCGTCGTCCGGGAGGAGGAAGGGGAGGGCACAAGCGATTCCTGCCCCCGTTGCTTCTCCGACCAGCGCTGGTGAGTTTGGGGGCGGCGGCGAAGTTAGGGTTTGGGGCGGCGGTAATCGTAGTGGTGAAGCGGCATTCATAAGCTTGCAATCGGGGTCTAGGGTTGCGAAACGGTCGATGGAGCTTGGTGTTCAAATGGGTGGGGAGATGGGTCTCGGATCGAATGGAGGTGGCGGGGCTGGAGGCCAGGTGCATGATGAAATGCCACACCGGAATGTGGATAGTTCGGGGAAGCGTCGTAAGATAGGGATGGAGATCCCATACGTCTCTGATTCAGAGAGTGACAATGATGATGACTGCATACTTCCAGGGGAGGATGGCAGTAGGATGCCGGTACAGTTATGCGCTGCTTCTGATTTGATTGAACTGAATCTGTTCACCATGAGCATGGGCAGGACAGATGAAGGGAGAATGGGTGATTCTGTGAAGACAGGTAAAAAGAAAGCTAGTGGAGTTACTATTCGAGAAAATGACATCCCCATTGACGAGCATGTGCACGGACAGAGTTCGGCAATTGGTGAGAGTATTGAGCTATTAGCATCTCCTATGCGAAGTGCATTAGGCGAAAACCATGCAGGTATGTATTCCACAGAAGAGGAGAGAAGGCAGAAGGCTAGGTATGATGTTAAAGGCAAAGGGAAGCTGTATTTGGGGAACGATGATTCTGGTGCTGGTACCGGGATTGGTAAGTTTAGTCCCGATAGTAAAGGAAAGGCTAAGATGGTTGTGGAAGAGAGTTCATTGTCTGTTAGCTCAGGTGCGGATCAAATGGATTTGAACTCAGTGATTTCTGAAGAGGTGCAGAGTTTCCCAGCAGATCATTGGGAACCACGTCGGAGAGAAAGGGCAAGACAGAGAGCTATTGAAATGGCTCCTAGGTTTGCATTCTTCAAAGCAGATGAAGATGGACATAGTGATGATGGTGATGATGATGATGACAATGCAGAAGAGTTGGAACCGGTTCCTGATCCTCAGGACTGGCCAGGTCCATTTTCAACTGCAATGAGGATCATTACTGACAGAGAAGCTAAACTGAGAGCTCGGGAGTTGAATTCTTCCAACTTGAACAAGTCTGCTAATAAGGTCATTTCGTGGATACCTTCCAAAGATAGGAAATCTCCACTGCGATCTGCTCCATCGCTTACTAGCTTGTGCTTGCAAACTCTTTCAAATAATGCTGAAGCTATCGAATCACTTGCTGGCATTCCAGATGAGCTAAAAAATAGACTCTTATCTAGTCTATGCCATTCTAGAAAGATGAATGCCCATCTTCTTGGTGAACTCATGTGTGATAATCCTGTGACAGTGCAACTCAGTGAGTGTTCATGGTTGAGTGAGGATGACTTTGAGACCATTTTTGGGAAATGCAGGACAGAAATCTTGCAGGTTTTGCAGCTTGACTTATCTGGGCGATGCATGCCTGACTACATGTTGCCTGCTACCTTAGCAAAGGTTCCTAACAGCATGCCATTATTGAAAAAAATATCTCTGAAGGGAAATACCGTCTTTCTGATAGTGGGTTAGACACAATAATCTCTGCAGCCCCTTCTCTGAGTTCGCTAAATTTGTGCGAGTGTCCTCTTCTCACTTCAACTGGAATCGAGAATCTTGCTAACAAGTTGACTTTACTCCTTACGGAACTATATATTGATGACTGCTTAAACGTGGATGCCATGATGATTCTTCCTTCCTTACAAAAGATTAAGCATTTAGAGGTTTCATCAATGTCTGGCATACAACCTGTCAGCAATAAGTTTGTCAATGAGCTTATTCCTGTACACGGTTCAAATCTGAAGGAGTTGGCATTTGCTGGTTGCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAGATGCGGGGATTCAGCAATGAGACATCTTCGCAATGGTTGCCGGCTTATAAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACAATTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGGGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGATGTCGAAGCCCCTGAAGGTGGCTGTAGCTTCTGGCAGGGAATATTTTTGCAAGCCTACCCTGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTCGAGTGTTTAACATTCGTTCATGTTATGAAAAATCCA]




>consensus_365#0
CCCCTCGCCCGCGCGGGAAAACCATAAAAAACTGCGCCGCCGCCCAAACCGCCTCCTCCT
CCTTCCCCCGCAAGCCTCTCCCCCTTCCCCCCCCCTCTCTCCCGCCGCCCTCGCGCTCCT
CCATCGCCGATGCCTCGCCCCCGCTCGGGCGCGGACACCGCGAGTGCATCCGCGGGGGTC
ACACTTCCGCCGTCGCCGTCGCCGCCGCCGCCGACGGAGATGGCGGGCGGGTCGTCGGCG
GGGACTCCGTGGCCGTCCCCGTCCACCGCCCTCACCCTCGGCCTCGGCCTCGGCCCCCCC
GCCGCCGACGGATCCCTCAAGTCCCCCGGCCTGGCGCCGCCGCCTCGCCGCAGCCTGCGC
CTCGCCTCCGGGGCGGTGGCATCCGGCGTCGCGAGCCCGACCACTACCCCGGCGTCGTCC
GCTCCTGCTGCGGGGGCCGATGGCGCTTCCTCCGGCTCTGGTTCCGCGTCGTCCGGGAGG
AGGAAGGGGAGGGCACAAGCGATTCCTGCCCCCGTTGCTTCTCCGACCAGCGCTGGTGAG
TTTGGGGGCGGCGGCGAAGTTAGGGTTTGGGGCGGCGGTAATCGTAGTGGTGAAGCGGCA
TTCATAAGCTTGCAATCGGGGTCTAGGGTTGCGAAACGGTCGATGGAGCTTGGTGTTCAA
ATGGGTGGGGAGATGGGTCTCGGATCGAATGGAGGTGGCGGGGCTGGAGGCCAGGTGCAT
GATGAAATGCCACACCGGAATGTGGATAGTTCGGGGAAGCGTCGTAAGATAGGGATGGAG
ATCCCATACGTCTCTGATTCAGAGAGTGACAATGATGATGACTGCATACTTCCAGGGGAG
GATGGCAGTAGGATGCCGGTACAGTTATGCGCTGCTTCTGATTTGATTGAACTGAATCTG
TTCACCATGAGCATGGGCAGGACAGATGAAGGGAGAATGGGTGATTCTGTGAAGACAGGT
AAAAAGAAAGCTAGTGGAGTTACTATTCGAGAAAATGACATCCCCATTGACGAGCATGTG
CACGGACAGAGTTCGGCAATTGGTGAGAGTATTGAGCTATTAGCATCTCCTATGCGAAGT
GCATTAGGCGAAAACCATGCAGGTATGTATTCCACAGAAGAGGAGAGAAGGCAGAAGGCT
AGGTATGATGTTAAAGGCAAAGGGAAGCTGTATTTGGGGAACGATGATTCTGGTGCTGGT
ACCGGGATTGGTAAGTTTAGTCCCGATAGTAAAGGAAAGGCTAAGATGGTTGTGGAAGAG
AGTTCATTGTCTGTTAGCTCAGGTGCGGATCAAATGGATTTGAACTCAGTGATTTCTGAA
GAGGTGCAGAGTTTCCCAGCAGATCATTGGGAACCACGTCGGAGAGAAAGGGCAAGACAG
AGAGCTATTGAAATGGCTCCTAGGTTTGCATTCTTCAAAGCAGATGAAGATGGACATAGT
GATGATGGTGATGATGATGATGACAATGCAGAAGAGTTGGAACCGGTTCCTGATCCTCAG
GACTGGCCAGGTCCATTTTCAACTGCAATGAGGATCATTACTGACAGAGAAGCTAAACTG
AGAGCTCGGGAGTTGAATTCTTCCAACTTGAACAAGTCTGCTAATAAGGTCATTTCGTGG
ATACCTTCCAAAGATAGGAAATCTCCACTGCGATCTGCTCCATCGCTTACTAGCTTGTGC
TTGCAAACTCTTTCAAATAATGCTGAAGCTATCGAATCACTTGCTGGCATTCCAGATGAG
CTAAAAAATAGACTCTTATCTAGTCTATGCCATTCTAGAAAGATGAATGCCCATCTTCTT
GGTGAACTCATGTGTGATAATCCTGTGACAGTGCAACTCAGTGAGTGTTCATGGTTGAGT
GAGGATGACTTTGAGACCATTTTTGGGAAATGCAGGACAGAAATCTTGCAGGTTTTGCAG
CTTGACTTATCTGGGCGATGCATGCCTGACTACATGTTGCCTGCTACCTTAGCAAAGGTT
CCTAACAGCATGCCATTATTGAAAAAAATATCTCTGAAGGGAAATACCGTCTTTCTGATA
GTGGGTTAGACACAATAATCTCTGCAGCCCCTTCTCTGAGTTCGCTAAATTTGTGCGAGT
GTCCTCTTCTCACTTCAACTGGAATCGAGAATCTTGCTAACAAGTTGACTTTACTCCTTA
CGGAACTATATATTGATGACTGCTTAAACGTGGATGCCATGATGATTCTTCCTTCCTTAC
AAAAGATTAAGCATTTAGAGGTTTCATCAATGTCTGGCATACAACCTGTCAGCAATAAGT
TTGTCAATGAGCTTATTCCTGTACACGGTTCAAATCTGAAGGAGTTGGCATTTGCTGGTT
GCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTT
CATTGGACCTTCGCAACCTGAATAGATGCGGGGATTCAGCAATGAGACATCTTCGCAATG
GTTGCCGGCTTATAAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGT
ATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGA
AGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTC
TGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCT
GCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGA
AAGGCCACTCAAATTCGCTGGTTACAATTGTTGGGATAGAAGGGAATATACTGAAGCAAA
CGGGGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGA
TGTCGAAGCCCCTGAAGGTGGCTGTAGCTTCTGGCAGGGAATATTTTTGCAAGCCTACCC
TGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTCGAGTGTTTAACA
TTCGTTCATGTTATGAAAAATCCA

consensusID : consensus_365#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 777
fasta sequence 
                              [GGACGAGACAAGGGGGGAGTTGGCATTTGCTGGTTGCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAGATTGCGGGATTCAGCAATGAGACATCTTCGCAATGGTTGTCGGCTTATAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACAGTTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGNGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGATGTCGAAGCCCCTGAAGGTGGCTGTAGCCTTCTGGCAGGGAATATTTTTGCAAGCCTACCCCTGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTCCGAGTGTTTAACATTCGGTTCATGGTTATGAAAAATTCCAACGTTTCATTACCCAGGGTNCCAACTNTTGGAAAGAAAGGGGAACTGTTTCAT]

[+] EMBL CA766066             [GGACGAGACAAGGGGGGAGTTGGCATTTGCTGGTTGCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAGATTGCGGGATTCAGCAATGAGACATCTTCGCAATGGTTGTCGGCTTATAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACAGTTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGNGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGATGTCGAAGCCCCTGAAGGTGGCTGTAGCCTTCTGGCAGGGAATATTTTTGCAAGCCTACCCCTGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTCCGAGTGTTTAACATTCGGTTCATGGTTATGAAAAATTCCAACGTTTCATTACCCAGGGTNCCAACTNTTGGAAAGAAAGGGGAACTGTTTCAT]




>consensus_365#1
GGACGAGACAAGGGGGGAGTTGGCATTTGCTGGTTGCTTGCAACTGACATCATCTTCCAT
TAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAG
ATTGCGGGATTCAGCAATGAGACATCTTCGCAATGGTTGTCGGCTTATAAAAAAATAAAG
CTCCAAAGGAATACATTCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGA
TACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGCTGGAAATCTTACTGCTTATGCA
ATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTG
ACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTA
TTTGGGTGTACCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACA
GTTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGNGAGTCTTTAGTTCCCATGATAA
CCTACATTAAACTAGCCATTCAGCTTAGTCATGATGTCGAAGCCCCTGAAGGTGGCTGTA
GCCTTCTGGCAGGGAATATTTTTGCAAGCCTACCCCTGCTCTCTGCTGATATCAATTAGA
TGATCCTATAGAGGATTAGCATTCCGAGTGTTTAACATTCGGTTCATGGTTATGAAAAAT
TCCAACGTTTCATTACCCAGGGTNCCAACTNTTGGAAAGAAAGGGGAACTGTTTCAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_365#0      CCCCTCGCCCGCGCGGGAAAACCATAAAAAACTGCGCCGCCGCCCAAACCGCCTCCTCCT 60
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CCTTCCCCCGCAAGCCTCTCCCCCTTCCCCCCCCCTCTCTCCCGCCGCCCTCGCGCTCCT 120
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CCATCGCCGATGCCTCGCCCCCGCTCGGGCGCGGACACCGCGAGTGCATCCGCGGGGGTC 180
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      ACACTTCCGCCGTCGCCGTCGCCGCCGCCGCCGACGGAGATGGCGGGCGGGTCGTCGGCG 240
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GGGACTCCGTGGCCGTCCCCGTCCACCGCCCTCACCCTCGGCCTCGGCCTCGGCCCCCCC 300
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GCCGCCGACGGATCCCTCAAGTCCCCCGGCCTGGCGCCGCCGCCTCGCCGCAGCCTGCGC 360
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CTCGCCTCCGGGGCGGTGGCATCCGGCGTCGCGAGCCCGACCACTACCCCGGCGTCGTCC 420
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GCTCCTGCTGCGGGGGCCGATGGCGCTTCCTCCGGCTCTGGTTCCGCGTCGTCCGGGAGG 480
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AGGAAGGGGAGGGCACAAGCGATTCCTGCCCCCGTTGCTTCTCCGACCAGCGCTGGTGAG 540
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      TTTGGGGGCGGCGGCGAAGTTAGGGTTTGGGGCGGCGGTAATCGTAGTGGTGAAGCGGCA 600
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      TTCATAAGCTTGCAATCGGGGTCTAGGGTTGCGAAACGGTCGATGGAGCTTGGTGTTCAA 660
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      ATGGGTGGGGAGATGGGTCTCGGATCGAATGGAGGTGGCGGGGCTGGAGGCCAGGTGCAT 720
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GATGAAATGCCACACCGGAATGTGGATAGTTCGGGGAAGCGTCGTAAGATAGGGATGGAG 780
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      ATCCCATACGTCTCTGATTCAGAGAGTGACAATGATGATGACTGCATACTTCCAGGGGAG 840
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GATGGCAGTAGGATGCCGGTACAGTTATGCGCTGCTTCTGATTTGATTGAACTGAATCTG 900
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      TTCACCATGAGCATGGGCAGGACAGATGAAGGGAGAATGGGTGATTCTGTGAAGACAGGT 960
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AAAAAGAAAGCTAGTGGAGTTACTATTCGAGAAAATGACATCCCCATTGACGAGCATGTG 1020
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CACGGACAGAGTTCGGCAATTGGTGAGAGTATTGAGCTATTAGCATCTCCTATGCGAAGT 1080
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GCATTAGGCGAAAACCATGCAGGTATGTATTCCACAGAAGAGGAGAGAAGGCAGAAGGCT 1140
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AGGTATGATGTTAAAGGCAAAGGGAAGCTGTATTTGGGGAACGATGATTCTGGTGCTGGT 1200
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      ACCGGGATTGGTAAGTTTAGTCCCGATAGTAAAGGAAAGGCTAAGATGGTTGTGGAAGAG 1260
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AGTTCATTGTCTGTTAGCTCAGGTGCGGATCAAATGGATTTGAACTCAGTGATTTCTGAA 1320
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GAGGTGCAGAGTTTCCCAGCAGATCATTGGGAACCACGTCGGAGAGAAAGGGCAAGACAG 1380
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AGAGCTATTGAAATGGCTCCTAGGTTTGCATTCTTCAAAGCAGATGAAGATGGACATAGT 1440
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GATGATGGTGATGATGATGATGACAATGCAGAAGAGTTGGAACCGGTTCCTGATCCTCAG 1500
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GACTGGCCAGGTCCATTTTCAACTGCAATGAGGATCATTACTGACAGAGAAGCTAAACTG 1560
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AGAGCTCGGGAGTTGAATTCTTCCAACTTGAACAAGTCTGCTAATAAGGTCATTTCGTGG 1620
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      ATACCTTCCAAAGATAGGAAATCTCCACTGCGATCTGCTCCATCGCTTACTAGCTTGTGC 1680
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      TTGCAAACTCTTTCAAATAATGCTGAAGCTATCGAATCACTTGCTGGCATTCCAGATGAG 1740
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CTAAAAAATAGACTCTTATCTAGTCTATGCCATTCTAGAAAGATGAATGCCCATCTTCTT 1800
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GGTGAACTCATGTGTGATAATCCTGTGACAGTGCAACTCAGTGAGTGTTCATGGTTGAGT 1860
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GAGGATGACTTTGAGACCATTTTTGGGAAATGCAGGACAGAAATCTTGCAGGTTTTGCAG 1920
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CTTGACTTATCTGGGCGATGCATGCCTGACTACATGTTGCCTGCTACCTTAGCAAAGGTT 1980
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CCTAACAGCATGCCATTATTGAAAAAAATATCTCTGAAGGGAAATACCGTCTTTCTGATA 2040
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GTGGGTTAGACACAATAATCTCTGCAGCCCCTTCTCTGAGTTCGCTAAATTTGTGCGAGT 2100
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      GTCCTCTTCTCACTTCAACTGGAATCGAGAATCTTGCTAACAAGTTGACTTTACTCCTTA 2160
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      CGGAACTATATATTGATGACTGCTTAAACGTGGATGCCATGATGATTCTTCCTTCCTTAC 2220
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      AAAAGATTAAGCATTTAGAGGTTTCATCAATGTCTGGCATACAACCTGTCAGCAATAAGT 2280
consensus_365#1      ------------------------------------------------------------
                                                                                 

consensus_365#0      TTGTCAATGAGCTTATTCCTGTACACGGTTCAAATCTGAAGGAGTTGGCATTTGCTGGTT 2340
consensus_365#1      ----------------------GGACGAGACAAG---GGGGGAGTTGGCATTTGCTGGTT 35
                                             ***   ***    *  ********************

consensus_365#0      GCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTT 2400
consensus_365#1      GCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTT 95
                     ************************************************************

consensus_365#0      CATTGGACCTTCGCAACCTGAATAGATGCGGGGATTCAGCAATGAGACATCTTCGCAATG 2460
consensus_365#1      CATTGGACCTTCGCAACCTGAATAGATTGCGGGATTCAGCAATGAGACATCTTCGCAATG 155
                     ***************************   ******************************

consensus_365#0      GTTGCCGGCTTATAAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGT 2520
consensus_365#1      GTTGTCGGCTTATAAAAAAA-TAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGT 214
                     **** *************** ***************************************

consensus_365#0      ATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGA 2580
consensus_365#1      ATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGA 274
                     ************************************************************

consensus_365#0      AGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTC 2640
consensus_365#1      AGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTC 334
                     ************************************************************

consensus_365#0      TGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCT 2700
consensus_365#1      TGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCT 394
                     ************************************************************

consensus_365#0      GCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGA 2760
consensus_365#1      GCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGA 454
                     ************************************************************

consensus_365#0      AAGGCCACTCAAATTCGCTGGTTACAATTGTTGGGATAGAAGGGAATATACTGAAGCAAA 2820
consensus_365#1      AAGGCCACTCAAATTCGCTGGTTACAGTTGTTGGGATAGAAGGGAATATACTGAAGCAAA 514
                     ************************** *********************************

consensus_365#0      CGGGGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGA 2880
consensus_365#1      CGGNGAGTCTTTAGTTCCCATGATAACCTACATTAAACTAGCCATTCAGCTTAGTCATGA 574
                     *** ********************************************************

consensus_365#0      TGTCGAAGCCCCTGAAGGTGGCTGTAGC-TTCTGGCAGGGAATATTTTTGCAAGCCTACC 2939
consensus_365#1      TGTCGAAGCCCCTGAAGGTGGCTGTAGCCTTCTGGCAGGGAATATTTTTGCAAGCCTACC 634
                     **************************** *******************************

consensus_365#0      C-TGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTC-GAGTGTTTA 2997
consensus_365#1      CCTGCTCTCTGCTGATATCAATTAGATGATCCTATAGAGGATTAGCATTCCGAGTGTTTA 694
                     * ************************************************ *********

consensus_365#0      ACATTCG-TTCATG-TTATGAAAAATCCA------------------------------- 3024
consensus_365#1      ACATTCGGTTCATGGTTATGAAAAATTCCAACGTTTCATTACCCAGGGTNCCAACTNTTG 754
                     ******* ****** *********** *                                

consensus_365#0      -----------------------
consensus_365#1      GAAAGAAAGGGGAACTGTTTCAT 777


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)