Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3694 cluster # 3694       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3694#0 length = 1002 sequences # 2  

consensusID : consensus_3694#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1002
fasta sequence
                              [CCCCCGCCCCTCTCCACNCCGCTCCGCGGNCCATGGCGATGGCGGCGCGAACCCTCGCCCTCGCATTCCCCCTCCCCCTCTGCGCCGTCTCCTCCCCGCGCCGCGCCACNCCACTCGCCTTGCCCCGCCGCGGGGCGGCACGACCGCTGGCCTCGCTAGCCCAGTGCCCCGCGCGTNGCCACNCCCCCTCGCCGCGGCGAGCAGCGGGGCGGGCCCTTGNGCCGTGCG-GGCCATGCGTGGCAGCGGCGGCGGTGGCGGTGGCGGAGAGTTTGCNTCGGACGATGGCGGCGGGGCGCGCGCGCTGCTTCGGGCGACGCTGTGGGGCGCCGAGGCCGCCTACATCCTCTGGCTCTTCCTCCTANCATACGCTCCGGGTGACCCGGTGTGGGGTATCTCGCAAGCAACGATCAGTGACCTCATTGGCTTGTCGCTCAATTTCTTCTTAATCCTGCCATTGCTCAATTCTGCTGGAGTTCACCTGCTCGAATCCCCGGTGTTGCACCCAGTGGCTGAAGGATTGTTCAATTTTGTGATCGCTTGGACACTGCTCTTTGCGCCGCTTCTCTTCACGGATTCTAGGAGGGATCGGTTCAAGGGATCACTCGACCTACTGTGGGGTTTTCAGATGTTCCTCACAAACACTTTCCTGATACCTTACATGGCAATCCGACTCAATGATCCTGACAAGGACAAGTCTCCACCACAAACATCAAAATTGGGTTCAGTTATGGTAAGAGGTGCTCCAATTGTCGGCCTAACTGGTGGCTTGGTCTGTATTTTGTCGATTGCTTGGGCACTCTCTGGTCGCGCGGATGCTAGTTTTGGGGGCATTGCTGAACGCTGGCAGTATGTCCAAAGTTATGTCTTTTCAGAGCGGCTTGCTTATGCATTTCTTTGGGACATACTGCTGTATTCCATATTCCAGCCATGGTTGATCGCGGACAATATTCAGAACGTGAAGGCAAGTGCTACTGAGTTTGTGAATTCAGTAAGGTTTCTTCC]

[+] EMBL AU093733             [CCCCCGCCCCTCTCCACNCCGCTCCGCGGNCCATGGCGATGGCGGCGCGAACCCTCGCCCTCGCATTCCCCCTCCCCCTCTGCGCCGTCTCCTCCCCGCGCCGCGCCACNCCACTCGCCTTGCCCCGCCGCGGGGCGGCACGACCGCTGGCCTCGCTAGCCCAGTGCCCCGCGCGTNGCCACNCCCCCTCGCCGCGGCGAGCAGCGGGGCGGGCCCTTGNGCCGTGCG GGCCATGCGTGGCAGCGGCGGCGGTGGCGGTGGCGGAGAGTTTGCNTCGGACGATGGCGGCGGGGCGCGCGCGCTGCTTCGGGCGACGCTGTGGGGCGCCGAGGCCGCCTACATCCTCTGGCTCTTCCTCCTANCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK109651             [   CCGCCCCTCTCCACCCCGCTCCGCGG CCATGGCGATGGCGGCGCGAACCCTCGCCCTCGCATTCCCCCTCCCCCTCTGCGCCGTCTCCTCCCCGCGCCGCGCCACCCCACTCGCCTTGCCCCGCCGCGGGGCGGCACGACCGCTGGCCTCGCTAGCCCAGTGCCCCGCGCGTGGCCACTCCCCCTCGCCGCGGCGAGCAGCGGGGCGGGCCCTTGCGCCGTGCGCGGCCATGCGTGGCAGCGGCGGCGGTGGCGGTGGCGGAGAGTTTGCCTCGGACGATGGCGGCGGGGCGCGCGCGCTGCTTCGGGCGACGCTGTGGGGCGCCGAGGCCGCCTACATCCTCTGGCTCTTCCTCCTACCATACGCTCCGGGTGACCCGGTGTGGGGTATCTCGCAAGCAACGATCAGTGACCTCATTGGCTTGTCGCTCAATTTCTTCTTAATCCTGCCATTGCTCAATTCTGCTGGAGTTCACCTGCTCGAATCCCCGGTGTTGCACCCAGTGGCTGAAGGATTGTTCAATTTTGTGATCGCTTGGACACTGCTCTTTGCGCCGCTTCTCTTCACGGATTCTAGGAGGGATCGGTTCAAGGGATCACTCGACCTACTGTGGGGTTTTCAGATGTTCCTCACAAACACTTTCCTGATACCTTACATGGCAATCCGACTCAATGATCCTGACAAGGACAAGTCTCCACCACAAACATCAAAATTGGGTTCAGTTATGGTAAGAGGTGCTCCAATTGTCGGCCTAACTGGTGGCTTGGTCTGTATTTTGTCGATTGCTTGGGCACTCTCTGGTCGCGCGGATGCTAGTTTTGGGGGCATTGCTGAACGCTGGCAGTATGTCCAAAGTTATGTCTTTTCAGAGCGGCTTGCTTATGCATTTCTTTGGGACATACTGCTGTATTCCATATTCCAGCCATGGTTGATCGCGGACAATATTCAGAACGTGAAGGCAAGTGCTACTGAGTTTGTGAATTCAGTAAGGTTTCTTCC]


>consensus_3694#0 CCCCCGCCCCTCTCCACNCCGCTCCGCGGNCCATGGCGATGGCGGCGCGAACCCTCGCCC TCGCATTCCCCCTCCCCCTCTGCGCCGTCTCCTCCCCGCGCCGCGCCACNCCACTCGCCT TGCCCCGCCGCGGGGCGGCACGACCGCTGGCCTCGCTAGCCCAGTGCCCCGCGCGTNGCC ACNCCCCCTCGCCGCGGCGAGCAGCGGGGCGGGCCCTTGNGCCGTGCGGGCCATGCGTGG CAGCGGCGGCGGTGGCGGTGGCGGAGAGTTTGCNTCGGACGATGGCGGCGGGGCGCGCGC GCTGCTTCGGGCGACGCTGTGGGGCGCCGAGGCCGCCTACATCCTCTGGCTCTTCCTCCT ANCATACGCTCCGGGTGACCCGGTGTGGGGTATCTCGCAAGCAACGATCAGTGACCTCAT TGGCTTGTCGCTCAATTTCTTCTTAATCCTGCCATTGCTCAATTCTGCTGGAGTTCACCT GCTCGAATCCCCGGTGTTGCACCCAGTGGCTGAAGGATTGTTCAATTTTGTGATCGCTTG GACACTGCTCTTTGCGCCGCTTCTCTTCACGGATTCTAGGAGGGATCGGTTCAAGGGATC ACTCGACCTACTGTGGGGTTTTCAGATGTTCCTCACAAACACTTTCCTGATACCTTACAT GGCAATCCGACTCAATGATCCTGACAAGGACAAGTCTCCACCACAAACATCAAAATTGGG TTCAGTTATGGTAAGAGGTGCTCCAATTGTCGGCCTAACTGGTGGCTTGGTCTGTATTTT GTCGATTGCTTGGGCACTCTCTGGTCGCGCGGATGCTAGTTTTGGGGGCATTGCTGAACG CTGGCAGTATGTCCAAAGTTATGTCTTTTCAGAGCGGCTTGCTTATGCATTTCTTTGGGA CATACTGCTGTATTCCATATTCCAGCCATGGTTGATCGCGGACAATATTCAGAACGTGAA GGCAAGTGCTACTGAGTTTGTGAATTCAGTAAGGTTTCTTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)