cluster # 3717

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Oryza sativa
cluster # 3717 cluster # 3717 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3717#0 length = 2253 sequences # 2
consensusID : consensus_3717#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2253
fasta sequence
                              [CTCGGCCCGCTAAAAGGAAGAAGAGAAGGAGAGGCGAAGGATCAGATAGGGGAAGGCCGGAGCCCGGAAGGGCATTGCCGCCGCGCCGCGCCGTAGCGAGCTCCAGCCGGCGGCGCTGCGGCGCCGCGGCGCCCACACCGTTCGAATCCGCCGGCGGCGGCGGCGGCGGTGGAAGGTTCGCGGGGTTCGCTCCCGAGTTTTAGCCCAGATAAGTAGCTCAACTGTACCCTTCGCACTTTCCATTTTTTCTGTTGACAAAGGGTATCTGAGGACAATCTGGCAGCAATCTGTGCCCAGGTTTTCTTTGCCCCTCGCTCTTAGCCACCACCAGGCACTGTATTAGTTCTAAAATGCAAAGGAATCTTCTGAAAAATTCACTGCTAACATAAGTATATAACTGATGCGGTCAATCATCTTCACCAATTTGGGCGTTCACGCGGTTGCTCCATCTGTAGCGCATAAAAAAGCAGATAGTCAGAATGTTGACCTTGCCATCAGTCTTTTTTTTTTTGGAAGAGCCATCAGTCTAATTGAGTGATTGTATACATGTTCAATGTTCATGGTGAGCCATCATTTTAGTTCGTGGTGTACTGCAAAGAGCCATTTATATTATGATGCAGACCAGTTGACACTGCAACTGGTTCTGGTTGTGCTTGCACGAACAGCTGACGGCATTAAACTGAGCCAAATCATTTGCAGAATTATTTATCTGGCATAAACAAATCCATTGATTGTGCCCCCATGTTCCTTTCTCTGTTTTGCTTCTTTTTTTTTTTAAAGCGAGGAAGTATAAATAGACATACAGACCACCACACAATCACACATGCACATCCATTCAACTTTTTGATCCTTTTTGTTTCCTGCCAAGAGAGAGCAACAACAAGCCCTCCTGTTCTTAACAAATGGCTACTACTGCTGCATTGGTTTTTGCAGGGAAGTCAGTTGCAACGCCGGCCATTTCATTCATTGTGAACAAAGCATTCAGCTATCTCAGTGAGTGGCACCAGGCTGAGGGTATGAAGGTTGTCAAAGATTAGGCTGTTACAAATGCTCAACCAGATCCAAGCAGTGTATGATGCTGTTGATCATCAGCAGATCAATGAGCAGAGTCATGCACTGGATAAGTGGCTGTGGCAGTTCCGGGATGCTGTTGAGGGGGCTGAGGATGTACTTGATGAGATAGACTACTACAAGCTTGAGGAAGAGGCTGGAGTCCACAACCTAGAACTTGAGGTGTGTAATTCAGTCGCAAAAAATTTCAAACAAAATGTTGTTCGTAAAAAATTTCAAACTTGAGGTTGCTAAGTATACTTCTGAGGGGAACATGGTAAAGAATCTTAGGTTGGCTCTCACGAGGTTGGATGAAACTGCTGCTGGTGTTGGTACATTCCTTCATCTAACAAGCCGTTTTGGTAGTGCTCTCTTGCCAGATCATGCTGAAAAGATTAATCAAGAGACTAGCTCCACTTTGGTGGCCACTGAGATCTTTGGCCGTGACACAGAGAAGAACGAGGTTATGAGGTGGTTGGTTGACAATATAGAGGGAGATTCGAACACTCCTGGAATCAACCGAGTCCCTGTTTCTGCAATAATTGGAATGGGGGGTATAGGAAAGACTACTCTTGCTCAGATTGTGTGCGAAGAATTTAAGAGATTTAACATACTTTGATTGTATTGTGTGGGTATATGTGTCTGATAATTCTTTCAATGCAGCAAGGATAACAAAAAACATCTTGGAGGCACTTACAAAACAGAAGCCTAATGCTAATACTTTGGAAGCATTGCAACACATTCTCAAAGAGAATCTCGAATCAAAGAAGTTTTTGCTCATATTGGATGATGTTTGGGAAGACAGCAATTGGGGTGAATGGCAAAAATTAATGGCTCCTTTCCAGAACAGACCCCATAACGGAAGTAGAATCCTGTTGACAACTCGAATGACATCTGTAGCAGATATGGTTACAAGTGTGATGCGAAGTAATAATGATTATATGAACCTAAATGGATTAGACGAATATCACAATTTTATGATGTTCAAGAAGTATGCCTTTTATGGTATGAAAACTGAAGATTATGAACATCTCCTGCCACTTGCTGAAAACATAGCAAAGAAGTTTCAAGGGTGTCCCTTGGTGACAAAGATTGCAAGCGAGCATCTCAGGAGCAATGTAAGTCATCATCATTGGAATAATTTATACAGGCAGTTGGAAAACTTAGAAGGAAAAACGAGTGCCATTATCACACCAGTTCTTC]

[+] EMBL AK063272             [CTCGGCCCGCTAAAAGGAAGAAGAGAAGGAGAGGCGAAGGATCAGATAGGGGAAGGCCGGAGCCCGGAAGGGCATTGCCGCCGCGCCGCGCCGTAGCGAGCTCCAGCCGGCGGCGCTGCGGCGCCGCGGCGCCCACACCGTTCGAATCCGCCGGCGGCGGCGGCGGCGGTGGAAGGTTCGCGGGGTTCGCTCCCGAGTTTTAGCCCAGATAAGTAGCTCAACTGTACCCTTCGCACTTTCCATTTTTTCTGTTGACAAAGGGTATCTGAGGACAATCTGGCAGCAATCTGTGCCCAGGTTTTCTTTGCCCCTCGCTCTTAGCCACCACCAGGCACTGTATTAGTTCTAAAATGCAAAGGAATCTTCTGAAAAATTCACTGCTAACATAAGTATATAACTGATGCGGTCAATCATCTTCACCAATTTGGGCGTTCACGCGGTTGCTCCATCTGTAGCGCATAAAAAAGCAGATAGTCAGAATGTTGACCTTGCCATCAGTCTTTTTTTTTTTGGAAGAGCCATCAGTCTAATTGAGTGATTGTATACATGTTCAATGTTCATGGTGAGCCATCATTTTAGTTCGTGGTGTACTGCAAAGAGCCATTTATATTATGATGCAGACCAGTTGACACTGCAACTGGTTCTGGTTGTGCTTGCACGAACAGCTGACGGCATTAAACTGAGCCAAATCATTTGCAGAATTATTTATCTGGCATAAACAAATCCATTGATTGTGCCCCCATGTTCCTTTCTCTGTTTTGCTTCTTTTTTTTTTTAAAGCGAGGAAGTATAAATAGACATACAGACCACCACACAATCACACATGCACATCCATTCAACTTTTTGATCCTTTTTGTTTCCTGCCAAGAGAGAGCAACAACAAGCCCTCCTGTTCTTAACAAATGGCTACTACTGCTGCATTGGTTTTTGCAGGGAAGTCAGTTGCAACGCCGGCCATTTCATTCATTGTGAACAAAGCATTCAGCTATCTCAGTGAGTGGCACCAGGCTGAGGGTATGAAGGTTGTCAAAGATTAGGCTGTTACAAATGCTCAACCAGATCCAAGCAGTGTATGATGCTGTTGATCATCAGCAGATCAATGAGCAGAGTCATGCACTGGATAAGTGGCTGTGGCAGTTCCGGGATGCTGTTGAGGGGGCTGAGGATGTACTTGATGAGATAGACTACTACAAGCTTGAGGAAGAGGCTGGAGTCCACAACCTAGAACTTGAGGTGTGTAATTCAGTCGCAAAAAATTTCAAACAAAATGTTGTTCGTAAAAAATTTCAAACTTGAGGTTGCTAAGTATACTTCTGAGGGGAACATGGTAAAGAATCTTAGGTTGGCTCTCACGAGGTTGGATGAAACTGCTGCTGGTGTTGGTACATTCCTTCATCTAACAAGCCGTTTTGGTAGTGCTCTCTTGCCAGATCATGCTGAAAAGATTAATCAAGAGACTAGCTCCACTTTGGTGGCCACTGAGATCTTTGGCCGTGACACAGAGAAGAACGAGGTTATGAGGTGGTTGGTTGACAATATAGAGGGAGATTCGAACACTCCTGGAATCAACCGAGTCCCTGTTTCTGCAATAATTGGAATGGGGGGTATAGGAAAGACTACTCTTGCTCAGATTGTGTGCGAAGAATTTAAGAGATTTAACATACTTTGATTGTATTGTGTGGGTATATGTGTCTGATAATTCTTTCAATGCAGCAAGGATAACAAAAAACATCTTGGAGGCACTTACAAAACAGAAGCCTAATGCTAATACTTTGGAAGCATTGCAACACATTCTCAAAGAGAATCTCGAATCAAAGAAGTTTTTGCTCATATTGGATGATGTTTGGGAAGACAGCAATTGGGGTGAATGGCAAAAATTAATGGCTCCTTTCCAGAACAGACCCCATAACGGAAGTAGAATCCTGTTGACAACTCGAATGACATCTGTAGCAGATATGGTTACAAGTGTGATGCGAAGTAATAATGATTATATGAACCTAAATGGATTAGACGAATATCACAATTTTATGATGTTCAAGAAGTATGCCTTTTATGGTATGAAAACTGAAGATTATGAACATCTCCTGCCACTTGCTGAAAACATAGCAAAGAAGTTTCAAGGGTGTCCCTTGGTGACAAAGATTGCAAGCGAGCATCTCAGGAGCAATGTAAGTCATCATCATTGGAATAATTTATACAGGCAGTTGGAAAACTTAGAAGGAAAAACGAGTGCCATTATCACACCAGTTCTT ]
[-] EMBL CB630975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCTCTCTTGCCAGATCATGCTGAAAAGATTAATCAAGAGACTAGCTCCACTTTGGTGGCCACTGAGATCTTTGGCCGTGACACAGAGAAGAACGAGGTTATGAGGTGGTTGGTTGACAATATAGAGGGAGATTCGAACACTCCTGGAATCAACCGAGTCCCTGTTTCTGCAATAATTGGAATGGGGGGTATAGGAAAGACTACTCTTGCTCAGATTGTGTGCGAAGAATTTAAGAGATTTAACATACTTTGATTGTATTGTGTGGGTATATGTGTCTGATAATTCTTTCAATGCAGCAAGGATAACAAAAAACATCTTGGAGGCACTTACAAAGCAGAAGCCTAATGCTAATACTTTGGAAGCATTGCAACACATTCTCAAAGAGAATCTCAAATCAAAGAAGTTTTTGCTCATATTGGATGATGTTTGGGAAGACAGCAATTGGGGTGAATGGCAAAAATTAATGGCTCCTTTCCAGAACAGCCCCCATAACGGAAGTAGAATCCTGTTGACAACTCGAATGACATCTGTAGCAGATATGGTTACAAGTGTGATGCGAAGTAATAATGATTATATGAACCTAAATGGATTAGACGAATATCACAATTTTATGATGTTCAAGAAGTATGCCTTTTATGGTATGAAAACTGAAGATTATGAACATCTCCTGCCACTTGCTGAAAACATAGCAAAGAAGTTTCAAGGGTGTCCCTTGGTGACAAAGATTGCAAGCGAGCATCTCAGGAGCAATGTAAGTCATCATCATTGGAATAATTTATACAGGCAGTTGGAAAACTTAGAAGGAAAAACGAGTGCCATTATCACACCAGTTCTTC]




>consensus_3717#0
CTCGGCCCGCTAAAAGGAAGAAGAGAAGGAGAGGCGAAGGATCAGATAGGGGAAGGCCGG
AGCCCGGAAGGGCATTGCCGCCGCGCCGCGCCGTAGCGAGCTCCAGCCGGCGGCGCTGCG
GCGCCGCGGCGCCCACACCGTTCGAATCCGCCGGCGGCGGCGGCGGCGGTGGAAGGTTCG
CGGGGTTCGCTCCCGAGTTTTAGCCCAGATAAGTAGCTCAACTGTACCCTTCGCACTTTC
CATTTTTTCTGTTGACAAAGGGTATCTGAGGACAATCTGGCAGCAATCTGTGCCCAGGTT
TTCTTTGCCCCTCGCTCTTAGCCACCACCAGGCACTGTATTAGTTCTAAAATGCAAAGGA
ATCTTCTGAAAAATTCACTGCTAACATAAGTATATAACTGATGCGGTCAATCATCTTCAC
CAATTTGGGCGTTCACGCGGTTGCTCCATCTGTAGCGCATAAAAAAGCAGATAGTCAGAA
TGTTGACCTTGCCATCAGTCTTTTTTTTTTTGGAAGAGCCATCAGTCTAATTGAGTGATT
GTATACATGTTCAATGTTCATGGTGAGCCATCATTTTAGTTCGTGGTGTACTGCAAAGAG
CCATTTATATTATGATGCAGACCAGTTGACACTGCAACTGGTTCTGGTTGTGCTTGCACG
AACAGCTGACGGCATTAAACTGAGCCAAATCATTTGCAGAATTATTTATCTGGCATAAAC
AAATCCATTGATTGTGCCCCCATGTTCCTTTCTCTGTTTTGCTTCTTTTTTTTTTTAAAG
CGAGGAAGTATAAATAGACATACAGACCACCACACAATCACACATGCACATCCATTCAAC
TTTTTGATCCTTTTTGTTTCCTGCCAAGAGAGAGCAACAACAAGCCCTCCTGTTCTTAAC
AAATGGCTACTACTGCTGCATTGGTTTTTGCAGGGAAGTCAGTTGCAACGCCGGCCATTT
CATTCATTGTGAACAAAGCATTCAGCTATCTCAGTGAGTGGCACCAGGCTGAGGGTATGA
AGGTTGTCAAAGATTAGGCTGTTACAAATGCTCAACCAGATCCAAGCAGTGTATGATGCT
GTTGATCATCAGCAGATCAATGAGCAGAGTCATGCACTGGATAAGTGGCTGTGGCAGTTC
CGGGATGCTGTTGAGGGGGCTGAGGATGTACTTGATGAGATAGACTACTACAAGCTTGAG
GAAGAGGCTGGAGTCCACAACCTAGAACTTGAGGTGTGTAATTCAGTCGCAAAAAATTTC
AAACAAAATGTTGTTCGTAAAAAATTTCAAACTTGAGGTTGCTAAGTATACTTCTGAGGG
GAACATGGTAAAGAATCTTAGGTTGGCTCTCACGAGGTTGGATGAAACTGCTGCTGGTGT
TGGTACATTCCTTCATCTAACAAGCCGTTTTGGTAGTGCTCTCTTGCCAGATCATGCTGA
AAAGATTAATCAAGAGACTAGCTCCACTTTGGTGGCCACTGAGATCTTTGGCCGTGACAC
AGAGAAGAACGAGGTTATGAGGTGGTTGGTTGACAATATAGAGGGAGATTCGAACACTCC
TGGAATCAACCGAGTCCCTGTTTCTGCAATAATTGGAATGGGGGGTATAGGAAAGACTAC
TCTTGCTCAGATTGTGTGCGAAGAATTTAAGAGATTTAACATACTTTGATTGTATTGTGT
GGGTATATGTGTCTGATAATTCTTTCAATGCAGCAAGGATAACAAAAAACATCTTGGAGG
CACTTACAAAACAGAAGCCTAATGCTAATACTTTGGAAGCATTGCAACACATTCTCAAAG
AGAATCTCGAATCAAAGAAGTTTTTGCTCATATTGGATGATGTTTGGGAAGACAGCAATT
GGGGTGAATGGCAAAAATTAATGGCTCCTTTCCAGAACAGACCCCATAACGGAAGTAGAA
TCCTGTTGACAACTCGAATGACATCTGTAGCAGATATGGTTACAAGTGTGATGCGAAGTA
ATAATGATTATATGAACCTAAATGGATTAGACGAATATCACAATTTTATGATGTTCAAGA
AGTATGCCTTTTATGGTATGAAAACTGAAGATTATGAACATCTCCTGCCACTTGCTGAAA
ACATAGCAAAGAAGTTTCAAGGGTGTCCCTTGGTGACAAAGATTGCAAGCGAGCATCTCA
GGAGCAATGTAAGTCATCATCATTGGAATAATTTATACAGGCAGTTGGAAAACTTAGAAG
GAAAAACGAGTGCCATTATCACACCAGTTCTTC
clustalw multiple alignements is not computed in this case