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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3777 cluster # 3777       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3777#0 length = 888 sequences # 2  

consensusID : consensus_3777#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 888
fasta sequence
                              [AATCAACTTGCAATAAACCTGCCTTAGCATAAATACATTCAACAAGGTAAAGTATTCCATCAGTATGTTATATTGATTGACATGCAAATGCAATAAAAAGAAGAAATATTCAACATACATCTCAATCTAAGCATGAAACAATGTACTAGTCCTACAGAATCCTAAGAAAACCGCAAAAAACAGCTTAAGCTCTTCATAGTTGAAGCACCATCCTGAACTCTATCAAGAATGCAACACACAAGCATCATGATCAAGTTGGCTTGTTGGAGTCTTGGAGACCATAACCCACTGAGATCCAAGGGCAATCACCTAAATTTATCCATTGGGGAAGCTCCCATAAGCCTCACGTTGATCATATCTTTGAATTTGTGAACAAGTTCAGCCCTACTAAGTATAGATATGCTTGAACCTACAGAAGTATGCTTCCAGGAGCAAACTTGTTTTTCCCAAATCACTGCATCATCCCAGAGCTCAGGCTTTGGCACCGCCCTCTACTGCACGGTTAAGAATGCTCGGCTACTGCCGTGGATCCACCTGTCTATGTAAGCGCATTAAAGCTTGTGCCCAAGCCACTAATTGAGTCAACTAATAATCTCCAATAACCTTGCATGGCCAGGAGGCGACCATGGCGGATCTCGGTTGGGTTGCTTGATGAGGGGGCCGGTCGCGGTAGATCCATGGCATCCGGCTTGAGGAGGAGCCACGGCGGAGGTTCGGGCCATCTGACTTGACGAGGGGACGGCCGCGCAACAGATCTAGGATCCCAGGTTGAGGGAAAAGGACGCGGACCGGTGCTACACC-GGCGTTGGTTGGGGAAAAGAGGAGGAGGCACCGGCGTCGATGCCAGCCGCAGCTATAGCTCGAGGAGGTGGCGTAGGAGTGTGGTCC]

[+] EMBL CB632641             [AATCAACTTGCAATAAACCTGCCTTAGCATAAATACATTCAACAAGGTAAAGTATTCCATCAGTATGTTATATTGATTGACATGCAAATGCAATAAAAAGAAGAAATATTCAACATACATCTCAATCTAAGCATGAAACAATGTACTAGTCCTACAGAATCCTAAGAAAACCGCAAAAAACAGCTTAAGCTCTTCATAGTTGAAGCACCATCCTGAACTCTATCAAGAATGCAACACACAAGCATCATGATCAAGTTGGCTTGTTGGAGTCTTGGAGACCATAACCCACTGAGATCCAAGGGCAATCACCTAAATTTATCCATTGGGGAAGCTCCCATAAGCCTCACGTTGATCATATCTTTGAATTTGTGAACAAGTTCAGCCCTACTAAGTATAGATATGCTTGAACCTACAGAAGTATGCTTCCAGGAGCAAACTTGTTTTTCCCAAATCACTGCATCATCCCAGAGCTCAGGCTTTGGCACCGCCCTCTACTGCACGGTTAAGAATGCTCGGCTACTGCCGTGGATCCACCTGTCTATGTAAGCGCATTAAAGCTTGTGCCCAAGCCACTAATTGAGTCAACTAATAATCTCCAATAACCTTGCATGGCCAGGAGGCGACCATGGCGGATCTCGGTTGGGTTGCTTGATGAGGGGGCCGGTCGCGGTAGATCCATGGCATCCGGCTTGAGGAGGAGCCACGGCGGAGGTTCGGGCCATCTGACTTGACGAGGGGACGGCCGCGCAACAGATCTAGGATCCCAGGTTGAGGGAAAAGGACGCGGACCGGTGCTACACC GGCGT                                                                                  ]
[-] EMBL CB632640             [                                                                                                                           AATCTAAGCATGAAACAATGTACTAGTCNTACAGAATCCTAAGAAAACCGCAAAAAACAGCTTAAGCTCTTCATAGTTGAAGCACCATCCTGAACTCTATCAAGAATGCAACACACAAGCATCATGATCAAGTTGGCTTGTTGGAGTCTTGGAGACCATAACCCACTGAGATCCAAGGGCAATCACCTAAATTTATCCATTGGGGAAGCTCCCATAAGCCTCACGTTGATCATATCTTTGAATTTGTGAACAAGTTCAGCCCTACTAAGTATAGATATGCTTGAACCTACAGAAGTATGCTTCCAGGAGCAAACTTGTTTTTCCCAAATCACTGCATCATCCCAGAGCTCAGGCTTTGGCACCGCCCTCTACTGCACGGTTAAGAATGCTCGGCTACTGCCGTGGATCCACCTGTCTATGTAAGCGCATTAAAGCTTGTGCCCAAGCCACTAATTGAGTCAACTAATAATCTCCAATAACCTTGCATGGCCAGGAGGCGACCATGGCGGATCTCGGTTGGGTTGCTTGATGAGGGGGCCGGTCGCGGTAGATCCATGGCATCCGGCTTGAGGAGGAGCCACGGCGGAGGTTCGGGCCATCTGACTTGACGAGGGGACGGCCGCGCAACAGATCTAGGATCCCAGGTTGAGGGAAAAGGACGCGGACCGGTGCTACACCTGGCGTTGGTTGGGGAAAAGAGGAGGAGGCACCGGCGTCGATGCCAGCCGCAGCTATAGCTCGAGGAGGTGGCGTAGGAGTGTGGTCC]


>consensus_3777#0 AATCAACTTGCAATAAACCTGCCTTAGCATAAATACATTCAACAAGGTAAAGTATTCCAT CAGTATGTTATATTGATTGACATGCAAATGCAATAAAAAGAAGAAATATTCAACATACAT CTCAATCTAAGCATGAAACAATGTACTAGTCCTACAGAATCCTAAGAAAACCGCAAAAAA CAGCTTAAGCTCTTCATAGTTGAAGCACCATCCTGAACTCTATCAAGAATGCAACACACA AGCATCATGATCAAGTTGGCTTGTTGGAGTCTTGGAGACCATAACCCACTGAGATCCAAG GGCAATCACCTAAATTTATCCATTGGGGAAGCTCCCATAAGCCTCACGTTGATCATATCT TTGAATTTGTGAACAAGTTCAGCCCTACTAAGTATAGATATGCTTGAACCTACAGAAGTA TGCTTCCAGGAGCAAACTTGTTTTTCCCAAATCACTGCATCATCCCAGAGCTCAGGCTTT GGCACCGCCCTCTACTGCACGGTTAAGAATGCTCGGCTACTGCCGTGGATCCACCTGTCT ATGTAAGCGCATTAAAGCTTGTGCCCAAGCCACTAATTGAGTCAACTAATAATCTCCAAT AACCTTGCATGGCCAGGAGGCGACCATGGCGGATCTCGGTTGGGTTGCTTGATGAGGGGG CCGGTCGCGGTAGATCCATGGCATCCGGCTTGAGGAGGAGCCACGGCGGAGGTTCGGGCC ATCTGACTTGACGAGGGGACGGCCGCGCAACAGATCTAGGATCCCAGGTTGAGGGAAAAG GACGCGGACCGGTGCTACACCGGCGTTGGTTGGGGAAAAGAGGAGGAGGCACCGGCGTCG ATGCCAGCCGCAGCTATAGCTCGAGGAGGTGGCGTAGGAGTGTGGTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)