Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 379 cluster # 379       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_379#0 length = 2183 sequences # 1  
 consensus_379#1 length = 652 sequences # 1  
consensusID : consensus_379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2183
fasta sequence 
                              [TCCCCGTGCCCCACCACTGGCGCCGCTCACCGGTCACGACCAATGCCGCCGACCGCCGCCGTCGCCGTCGCCGTGGCCGCGGCCACCGCGCTCCCTTCTCCCTCCTCCTCCTCCTCCCACCGCCGCCTCCCCGCCACCGCAAAATCCGTCTGGGTAAACCCCAGCCTCCCGAGCTCCCAGCCCTTCCATCGCCGGAAACCCGCCGAGCCCCAGCACCAGCGCCAGGACCACGTGCCCGACCTCCCCGCGCTCCTCGCGGCCCTCTCCGCCGCGCGCACGGCCTCCGACCTGGCCGCCGCGGTCTCCCCGCACCGCCCCGTCTCCCCGCGCCTCCTCGGCACGCTCCTCTCCCGCCTCCCCGACGCGCGCCGCGGCGTCGCGCTCCTCGACCTCCTCGCGCCAGACCTCCCCGCCTCCGCGCTCCTCATCCCGTACAACCTCCTGCTCCGCTCCGCGTGCCGCGCCGGGATGCTCCGCCTCGCCTCCGGCCTCCTCCTGGAGATGCGGGACAGAGGGGTCGCCCCCGACGCGTTCTCGTACTCCACGCTCCTCGCGGCGCTCACCCGCGCGGGCCACCTCGACCACGCGCTCACCTTCCTGCCGCTCATGGAGGACGACGCCGTAGCGCCCGACCTCGTGCTCTTCTCCAACCTCATCCACCTCGCCCTCCGCGGGGGCGACGCGCCCAAGGCGCTCGCGCTCTTCTCCCGCCTTCGGGGCGCCGCCGGGATCAAGCCCGACCTCAAGGCCTACAACGCCGCCATCGCCGCGTACTGCAAGTCCGACCTGCTCCGGGACGCCAACCGGCTCCTCCTCCACGACATGCCCTCCGACGGCGTCGCGCCCGACGCGGAGTCGTACTCCCCCATCCTCGCCGCGCTGGCGCGCCGCGGGCGGCACCTCGCGGCCGTGTCGCTCTTCACGCACATGCGCGCCGTGGCTCGCGTCAAGCCCGACCTGTCCGTGTTCAACATCGTGCTCAACGCGTACGGGCAGCTCGACCTCGCGCGGGAGGCGGACCGGCTGTTCTGGTCCATGCGCCGTGCTGGTGTCGCCCCGAGCGTGGTCACCTACAACACCATGCTCCGCGTGTACGGCGACGCCGGGCTGTTCGGGGAGGCGGTCCACCTGTTCGGCCTCATGCGTAGCGCCGCCTCCGATGGCAGCGACCGCGGTGGCAGCGTCATCAAGCCGAACGTGGTGACGTACAACACCATGATCGCCATCTACGGCAAGTCGCTGGAGGACGAGAAAGCCGGGAGCCTGGTGCAGGACATGCAGGCCAATGGCATCCAGCCCAATGCCATCACCTACTCAACCATCCTGTCCATATGGGTGAAGGCCGGGAAGCTCGACCGTGCGGGAAGCTGTTCGAGAAGCTCCGGGAAGCCGGCACGGAGATCGACCCGGTGCTTTACCAGACGATGGTCGTGGCCTACGAGCGTGCCGGGCTTGTTTCACAATCCAAGCGCCTGTTGCATGACCTCAAAGACTCAGAGGACGTCCCCAAGGAGACAGCCATCAAAATCTTGGCGAATGCCGGCCGAGTGGAGGAGGCCGCATGGCTGTTCCGCCGTGCAGCCGACGCCGGCGACGTCAGGGACACATCGGTGTACCGAATGATGATTGACTTGTTCGCAAAGAGCCGGAGGCACCGGAGTGTGATCGAGGTGTTCGACGAAATGAGGAAGGCGGGGTCTTTGCCGGACTCGGAGACGATCGCCATCACGATGAATGCTCATGGTAAGCTGAAGGAGTTCGACAAGGCGGCGGCGCTGTACCGGGCGATGAGGGAGGAAGGATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCCCAGAAGGACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATCGACAAGAGGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGATGAGTCGTCACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTCAGATGAGAACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACACACCATAGTGTCATTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTGTGGAAGTTCTTTTTCAATTAAATTTTAGACACCA]

[+] EMBL AK067226             [TCCCCGTGCCCCACCACTGGCGCCGCTCACCGGTCACGACCAATGCCGCCGACCGCCGCCGTCGCCGTCGCCGTGGCCGCGGCCACCGCGCTCCCTTCTCCCTCCTCCTCCTCCTCCCACCGCCGCCTCCCCGCCACCGCAAAATCCGTCTGGGTAAACCCCAGCCTCCCGAGCTCCCAGCCCTTCCATCGCCGGAAACCCGCCGAGCCCCAGCACCAGCGCCAGGACCACGTGCCCGACCTCCCCGCGCTCCTCGCGGCCCTCTCCGCCGCGCGCACGGCCTCCGACCTGGCCGCCGCGGTCTCCCCGCACCGCCCCGTCTCCCCGCGCCTCCTCGGCACGCTCCTCTCCCGCCTCCCCGACGCGCGCCGCGGCGTCGCGCTCCTCGACCTCCTCGCGCCAGACCTCCCCGCCTCCGCGCTCCTCATCCCGTACAACCTCCTGCTCCGCTCCGCGTGCCGCGCCGGGATGCTCCGCCTCGCCTCCGGCCTCCTCCTGGAGATGCGGGACAGAGGGGTCGCCCCCGACGCGTTCTCGTACTCCACGCTCCTCGCGGCGCTCACCCGCGCGGGCCACCTCGACCACGCGCTCACCTTCCTGCCGCTCATGGAGGACGACGCCGTAGCGCCCGACCTCGTGCTCTTCTCCAACCTCATCCACCTCGCCCTCCGCGGGGGCGACGCGCCCAAGGCGCTCGCGCTCTTCTCCCGCCTTCGGGGCGCCGCCGGGATCAAGCCCGACCTCAAGGCCTACAACGCCGCCATCGCCGCGTACTGCAAGTCCGACCTGCTCCGGGACGCCAACCGGCTCCTCCTCCACGACATGCCCTCCGACGGCGTCGCGCCCGACGCGGAGTCGTACTCCCCCATCCTCGCCGCGCTGGCGCGCCGCGGGCGGCACCTCGCGGCCGTGTCGCTCTTCACGCACATGCGCGCCGTGGCTCGCGTCAAGCCCGACCTGTCCGTGTTCAACATCGTGCTCAACGCGTACGGGCAGCTCGACCTCGCGCGGGAGGCGGACCGGCTGTTCTGGTCCATGCGCCGTGCTGGTGTCGCCCCGAGCGTGGTCACCTACAACACCATGCTCCGCGTGTACGGCGACGCCGGGCTGTTCGGGGAGGCGGTCCACCTGTTCGGCCTCATGCGTAGCGCCGCCTCCGATGGCAGCGACCGCGGTGGCAGCGTCATCAAGCCGAACGTGGTGACGTACAACACCATGATCGCCATCTACGGCAAGTCGCTGGAGGACGAGAAAGCCGGGAGCCTGGTGCAGGACATGCAGGCCAATGGCATCCAGCCCAATGCCATCACCTACTCAACCATCCTGTCCATATGGGTGAAGGCCGGGAAGCTCGACCGTGCGGGAAGCTGTTCGAGAAGCTCCGGGAAGCCGGCACGGAGATCGACCCGGTGCTTTACCAGACGATGGTCGTGGCCTACGAGCGTGCCGGGCTTGTTTCACAATCCAAGCGCCTGTTGCATGACCTCAAAGACTCAGAGGACGTCCCCAAGGAGACAGCCATCAAAATCTTGGCGAATGCCGGCCGAGTGGAGGAGGCCGCATGGCTGTTCCGCCGTGCAGCCGACGCCGGCGACGTCAGGGACACATCGGTGTACCGAATGATGATTGACTTGTTCGCAAAGAGCCGGAGGCACCGGAGTGTGATCGAGGTGTTCGACGAAATGAGGAAGGCGGGGTCTTTGCCGGACTCGGAGACGATCGCCATCACGATGAATGCTCATGGTAAGCTGAAGGAGTTCGACAAGGCGGCGGCGCTGTACCGGGCGATGAGGGAGGAAGGATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCCCAGAAGGACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATCGACAAGAGGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGATGAGTCGTCACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTCAGATGAGAACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACACACCATAGTGTCATTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTGTGGAAGTTCTTTTTCAATTAAATTTTAGACACCA]




>consensus_379#0
TCCCCGTGCCCCACCACTGGCGCCGCTCACCGGTCACGACCAATGCCGCCGACCGCCGCC
GTCGCCGTCGCCGTGGCCGCGGCCACCGCGCTCCCTTCTCCCTCCTCCTCCTCCTCCCAC
CGCCGCCTCCCCGCCACCGCAAAATCCGTCTGGGTAAACCCCAGCCTCCCGAGCTCCCAG
CCCTTCCATCGCCGGAAACCCGCCGAGCCCCAGCACCAGCGCCAGGACCACGTGCCCGAC
CTCCCCGCGCTCCTCGCGGCCCTCTCCGCCGCGCGCACGGCCTCCGACCTGGCCGCCGCG
GTCTCCCCGCACCGCCCCGTCTCCCCGCGCCTCCTCGGCACGCTCCTCTCCCGCCTCCCC
GACGCGCGCCGCGGCGTCGCGCTCCTCGACCTCCTCGCGCCAGACCTCCCCGCCTCCGCG
CTCCTCATCCCGTACAACCTCCTGCTCCGCTCCGCGTGCCGCGCCGGGATGCTCCGCCTC
GCCTCCGGCCTCCTCCTGGAGATGCGGGACAGAGGGGTCGCCCCCGACGCGTTCTCGTAC
TCCACGCTCCTCGCGGCGCTCACCCGCGCGGGCCACCTCGACCACGCGCTCACCTTCCTG
CCGCTCATGGAGGACGACGCCGTAGCGCCCGACCTCGTGCTCTTCTCCAACCTCATCCAC
CTCGCCCTCCGCGGGGGCGACGCGCCCAAGGCGCTCGCGCTCTTCTCCCGCCTTCGGGGC
GCCGCCGGGATCAAGCCCGACCTCAAGGCCTACAACGCCGCCATCGCCGCGTACTGCAAG
TCCGACCTGCTCCGGGACGCCAACCGGCTCCTCCTCCACGACATGCCCTCCGACGGCGTC
GCGCCCGACGCGGAGTCGTACTCCCCCATCCTCGCCGCGCTGGCGCGCCGCGGGCGGCAC
CTCGCGGCCGTGTCGCTCTTCACGCACATGCGCGCCGTGGCTCGCGTCAAGCCCGACCTG
TCCGTGTTCAACATCGTGCTCAACGCGTACGGGCAGCTCGACCTCGCGCGGGAGGCGGAC
CGGCTGTTCTGGTCCATGCGCCGTGCTGGTGTCGCCCCGAGCGTGGTCACCTACAACACC
ATGCTCCGCGTGTACGGCGACGCCGGGCTGTTCGGGGAGGCGGTCCACCTGTTCGGCCTC
ATGCGTAGCGCCGCCTCCGATGGCAGCGACCGCGGTGGCAGCGTCATCAAGCCGAACGTG
GTGACGTACAACACCATGATCGCCATCTACGGCAAGTCGCTGGAGGACGAGAAAGCCGGG
AGCCTGGTGCAGGACATGCAGGCCAATGGCATCCAGCCCAATGCCATCACCTACTCAACC
ATCCTGTCCATATGGGTGAAGGCCGGGAAGCTCGACCGTGCGGGAAGCTGTTCGAGAAGC
TCCGGGAAGCCGGCACGGAGATCGACCCGGTGCTTTACCAGACGATGGTCGTGGCCTACG
AGCGTGCCGGGCTTGTTTCACAATCCAAGCGCCTGTTGCATGACCTCAAAGACTCAGAGG
ACGTCCCCAAGGAGACAGCCATCAAAATCTTGGCGAATGCCGGCCGAGTGGAGGAGGCCG
CATGGCTGTTCCGCCGTGCAGCCGACGCCGGCGACGTCAGGGACACATCGGTGTACCGAA
TGATGATTGACTTGTTCGCAAAGAGCCGGAGGCACCGGAGTGTGATCGAGGTGTTCGACG
AAATGAGGAAGGCGGGGTCTTTGCCGGACTCGGAGACGATCGCCATCACGATGAATGCTC
ATGGTAAGCTGAAGGAGTTCGACAAGGCGGCGGCGCTGTACCGGGCGATGAGGGAGGAAG
GATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCCCAGAAGG
ACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATCGACAAGA
GGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGATGAGTCGT
CACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTCAGATGAG
AACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACACACCATA
GTGTCATTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTGTGGAAGTTCTT
TTTCAATTAAATTTTAGACACCA

consensusID : consensus_379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 652
fasta sequence 
                              [GGGGTCGGAGACCGCCTGGCTAATGCCCCGCGCGACTGGCGCCCGGCCGCCGGTGCCGATACAGCAGGGCACACGGCACCCAGCCAGCGCTCAGCGCCCCGATCGGCGCCCCCAGATCATGCGCTCCCTTGTTCGCAAAGACCCGGAGGCACCCCGAGTCTGACCGAGGTGTTCCCCCACATGAGGAAGGCGGGGTCTCTGCCGGACTGGGACACGATCGCCATCCCGATGAATGCTCATGGTAAGCTGAAGGAGTTCGCCAAGGCGCTGGCGCTGTACCGGGCGATGAGGGAGGAAGCATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCCCAGAAGGACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATCGACAAGAGGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGATGAGTCGTCACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTCAGATGAGAACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACACACCATAGTGTTGTTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTTGTGGA]

[-] EMBL CA760248             [GGGGTCGGAGACCGCCTGGCTAATGCCCCGCGCGACTGGCGCCCGGCCGCCGGTGCCGATACAGCAGGGCACACGGCACCCAGCCAGCGCTCAGCGCCCCGATCGGCGCCCCCAGATCATGCGCTCCCTTGTTCGCAAAGACCCGGAGGCACCCCGAGTCTGACCGAGGTGTTCCCCCACATGAGGAAGGCGGGGTCTCTGCCGGACTGGGACACGATCGCCATCCCGATGAATGCTCATGGTAAGCTGAAGGAGTTCGCCAAGGCGCTGGCGCTGTACCGGGCGATGAGGGAGGAAGCATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCCCAGAAGGACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATCGACAAGAGGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGATGAGTCGTCACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTCAGATGAGAACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACACACCATAGTGTTGTTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTTGTGGA]




>consensus_379#1
GGGGTCGGAGACCGCCTGGCTAATGCCCCGCGCGACTGGCGCCCGGCCGCCGGTGCCGAT
ACAGCAGGGCACACGGCACCCAGCCAGCGCTCAGCGCCCCGATCGGCGCCCCCAGATCAT
GCGCTCCCTTGTTCGCAAAGACCCGGAGGCACCCCGAGTCTGACCGAGGTGTTCCCCCAC
ATGAGGAAGGCGGGGTCTCTGCCGGACTGGGACACGATCGCCATCCCGATGAATGCTCAT
GGTAAGCTGAAGGAGTTCGCCAAGGCGCTGGCGCTGTACCGGGCGATGAGGGAGGAAGCA
TGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCCCAGAAGGAC
TTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATCGACAAGAGG
GAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGATGAGTCGTCA
CAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTCAGATGAGAA
CCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACACACCATAGT
GTTGTTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTTGTGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_379#0      TCCCCGTGCCCCACCACTGGCGCCGCTCACCGGTCACGACCAATGCCGCCGACCGCCGCC 60
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GTCGCCGTCGCCGTGGCCGCGGCCACCGCGCTCCCTTCTCCCTCCTCCTCCTCCTCCCAC 120
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CGCCGCCTCCCCGCCACCGCAAAATCCGTCTGGGTAAACCCCAGCCTCCCGAGCTCCCAG 180
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CCCTTCCATCGCCGGAAACCCGCCGAGCCCCAGCACCAGCGCCAGGACCACGTGCCCGAC 240
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CTCCCCGCGCTCCTCGCGGCCCTCTCCGCCGCGCGCACGGCCTCCGACCTGGCCGCCGCG 300
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GTCTCCCCGCACCGCCCCGTCTCCCCGCGCCTCCTCGGCACGCTCCTCTCCCGCCTCCCC 360
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GACGCGCGCCGCGGCGTCGCGCTCCTCGACCTCCTCGCGCCAGACCTCCCCGCCTCCGCG 420
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CTCCTCATCCCGTACAACCTCCTGCTCCGCTCCGCGTGCCGCGCCGGGATGCTCCGCCTC 480
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GCCTCCGGCCTCCTCCTGGAGATGCGGGACAGAGGGGTCGCCCCCGACGCGTTCTCGTAC 540
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      TCCACGCTCCTCGCGGCGCTCACCCGCGCGGGCCACCTCGACCACGCGCTCACCTTCCTG 600
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CCGCTCATGGAGGACGACGCCGTAGCGCCCGACCTCGTGCTCTTCTCCAACCTCATCCAC 660
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CTCGCCCTCCGCGGGGGCGACGCGCCCAAGGCGCTCGCGCTCTTCTCCCGCCTTCGGGGC 720
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GCCGCCGGGATCAAGCCCGACCTCAAGGCCTACAACGCCGCCATCGCCGCGTACTGCAAG 780
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      TCCGACCTGCTCCGGGACGCCAACCGGCTCCTCCTCCACGACATGCCCTCCGACGGCGTC 840
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GCGCCCGACGCGGAGTCGTACTCCCCCATCCTCGCCGCGCTGGCGCGCCGCGGGCGGCAC 900
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CTCGCGGCCGTGTCGCTCTTCACGCACATGCGCGCCGTGGCTCGCGTCAAGCCCGACCTG 960
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      TCCGTGTTCAACATCGTGCTCAACGCGTACGGGCAGCTCGACCTCGCGCGGGAGGCGGAC 1020
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      CGGCTGTTCTGGTCCATGCGCCGTGCTGGTGTCGCCCCGAGCGTGGTCACCTACAACACC 1080
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      ATGCTCCGCGTGTACGGCGACGCCGGGCTGTTCGGGGAGGCGGTCCACCTGTTCGGCCTC 1140
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      ATGCGTAGCGCCGCCTCCGATGGCAGCGACCGCGGTGGCAGCGTCATCAAGCCGAACGTG 1200
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      GTGACGTACAACACCATGATCGCCATCTACGGCAAGTCGCTGGAGGACGAGAAAGCCGGG 1260
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      AGCCTGGTGCAGGACATGCAGGCCAATGGCATCCAGCCCAATGCCATCACCTACTCAACC 1320
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      ATCCTGTCCATATGGGTGAAGGCCGGGAAGCTCGACCGTGCGGGAAGCTGTTCGAGAAGC 1380
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      TCCGGGAAGCCGGCACGGAGATCGACCCGGTGCTTTACCAGACGATGGTCGTGGCCTACG 1440
consensus_379#1      ------------------------------------------------------------
                                                                                 

consensus_379#0      AGCGTGCCGGGCTTGTTTCACAATCCAAGCGCCTGTTGCATGACCTCAAAGACTCAGAGG 1500
consensus_379#1      -----------------------------------------------------------G 1
                                                                                *

consensus_379#0      ACGTCCCCAAGGAGACAGCC--ATCAAAATCTTG-GCGAATGCCGGCCGAGTGGAGGAGG 1557
consensus_379#1      GGGTC-----GGAGACCGCCTGGCTAATGCCCCGCGCGACTGGCGCCCGGCCGCCGGTGC 56
                       ***     ****** ***     **   *  * **** ** ** ***   *  ** * 

consensus_379#0      CCGCATGGCTGTTCCGCCGTGCAGCCGACGCCGGCGACGTCAGGGACAC-ATCGGTGTAC 1616
consensus_379#1      CGATACAGCAGGGCACACG-GCACCCA--GCCAGCGC--TCAGCGCCCCGATCGGCGCCC 111
                     *   *  ** *  *   ** *** **   *** ***   **** * * * ***** *  *

consensus_379#0      CGA-ATGATG-ATTGACTTGTTCGCAAAGAGCCGGAGGCACCG-GAGTGTGATCGAGGTG 1673
consensus_379#1      CCAGATCATGCGCTCCCTTGTTCGCAAAGACCCGGAGGCACCCCGAGTCTGACCGAGGTG 171
                     * * ** ***   *  ************** ***********  **** *** *******

consensus_379#0      TTCGACGAAATGAGGAAGGCGGGGTCTTTGCCGGACTCGGAGACGATCGCCATCACGATG 1733
consensus_379#1      TTCCCCCACATGAGGAAGGCGGGGTCTCTGCCGGACTGGGACACGATCGCCATCCCGATG 231
                     ***  * * ****************** ********* *** ************ *****

consensus_379#0      AATGCTCATGGTAAGCTGAAGGAGTTCGACAAGGCGGCGGCGCTGTACCGGGCGATGAGG 1793
consensus_379#1      AATGCTCATGGTAAGCTGAAGGAGTTCGCCAAGGCGCTGGCGCTGTACCGGGCGATGAGG 291
                     **************************** *******  **********************

consensus_379#0      GAGGAAGGATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCC 1853
consensus_379#1      GAGGAAGCATGCGTCTTCTCAGACAGGGTGCACTTCCAGATGGTCAGCCTGCTCGGCGCC 351
                     ******* ****************************************************

consensus_379#0      CAGAAGGACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATC 1913
consensus_379#1      CAGAAGGACTTCGACGCGCTGGAGGCACTGCTCGGTGAGCTTAGCGATGACCCGAGCATC 411
                     ************************************************************

consensus_379#0      GACAAGAGGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGAT 1973
consensus_379#1      GACAAGAGGGAGCTTTACCTTGTGGCTGCCGGCGTGTACGAGAGAGCATGCAAGTTTGAT 471
                     ************************************************************

consensus_379#0      GAGTCGTCACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTC 2033
consensus_379#1      GAGTCGTCACAGATTATCAGCCAGATAAGAAGCCCCAACGCCATTGGTGTCCAGAAGTTC 531
                     ************************************************************

consensus_379#0      AGATGAGAACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACA 2093
consensus_379#1      AGATGAGAACCTCCAGTTTCTCTGACGACAAATTCAGGTGTATTGCCAGACAGCAATACA 591
                     ************************************************************

consensus_379#0      CACCATAGTGTCATTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACT-GTGG 2152
consensus_379#1      CACCATAGTGTTGTTGACAATTCAAGGTTGTAACTTGTAAGTGCGCGTGGCCACTTGTGG 651
                     ***********  ****************************************** ****

consensus_379#0      AAGTTCTTTTTCAATTAAATTTTAGACACCA 2183
consensus_379#1      A------------------------------ 652
                     *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)