cluster # 3792

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Oryza sativa
cluster # 3792 cluster # 3792 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3792#0 length = 1109 sequences # 2

consensusID : consensus_3792#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1109
fasta sequence

                              [AGAAAAGGAAGAAGAAAAACTCTCGTCGGCGGCGACCTAAACGCCGGCGAGCTGAAGGGGAAGGGAGGGAAGCCGCCGGCGACCACCCACCGCACCTACCACCACCTCGGCCTCATACACCCTCCTCTCTGTGCGCGTCTTTCTCTCCGCCGGACTGCGGCGCGGGCGGAAGCGGGGTGGTTTTAGGGTTTTGGCCGGCGACCAGATGGCGGCGGAGGCGGGGATGCGCGTGAACGTGGCGAGTCTGCTCGCCCTCGGGGACGACACCGTGGAGTTGCTCGGCGAGAGGAAGGACGGCGAGGCCCTCGCGCAGGCCTGCGCCGGGGCGCGGATGCTGCGTTCCGCCTGCCGCTCGGAGTCCGACGACCTCGAGGTGCAAATGAAAGAGTATCAGGAAAAAATAAAGTCCTGCAAAGAAAAGATAGAAAAGACAAAATCTGAAACAATTGCCGATGATGAACTGAATGCTCTGCAAAAAGAGATGGAGGAGAAACTTCAAGATGAGCAACGCCTTCGCCAGGATTTAAGAGCAGTACGTGATGAGCTTGATAACCTAGATAGCCAAAGAGATTCTATAGAACAAAGGAAGGAAGCTCTAAGGAAGATGGAAAAGGAAATGATGAAAGCACAAAATATGCTTTCCATGTGTGTGTCAGTGACCAAAATCATGCCAAATTTTGAAGACAAGGACAAGATCTCTGGTTATATTGTTGATAAGAACATGAAGAAACTAGAGAGGTTCGAGTTTGACAAGACGACGCCCCCTGTTGATATCTGCAACAACCTTTGGAAGATGGTTTAGATGTTGCGTGGAGATAACGGTCGTGGACGATGGACCTCCCATCGAACATCCCTTTTTTTTTGTTATCACCGTTGAATGCTGCCAAAGGACCAAGATGCGTCCAGTTCGCATTTCATGCAGAGATCTACAGAAGTGCTATCTGTTTGTAGATTTGCTAAGATCAAGATCTCTTTAGCTAGTCCTTGGCTCGTTGCCATGTTCCTTTTAGTATGTGTAAGTACTAAGTTGTATAACATTTCACATGCTATTGTTATTCCGGAAGCTGCTCTCACTTGCAAAGCTGCAAGTTTGCAGCCCAATGCCATTT]

[+] EMBL AK108515             [AGAAAAGGAAGAAGAAAAACTCTCGTCGGCGGCGACCTAAACGCCGGCGAGCTGAAGGGGAAGGGAGGGAAGCCGCCGGCGACCACCCACCGCACCTACCACCACCTCGGCCTCATACACCCTCCTCTCTGTGCGCGTCTTTCTCTCCGCCGGACTGCGGCGCGGGCGGAAGCGGGGTGGTTTTAGGGTTTTGGCCGGCGACCAGATGGCGGCGGAGGCGGGGATGCGCGTGAACGTGGCGAGTCTGCTCGCCCTCGGGGACGACACCGTGGAGTTGCTCGGCGAGAGGAAGGACGGCGAGGCCCTCGCGCAGGCCTGCGCCGGGGCGCGGATGCTGCGTTCCGCCTGCCGCTCGGAGTCCGACGACCTCGAGGTGCAAATGAAAGAGTATCAGGAAAAAATAAAGTCCTGCAAAGAAAAGATAGAAAAGACAAAATCTGAAACAATTGCCGATGATGAACTGAATGCTCTGCAAAAAGAGATGGAGGAGAAACTTCAAGATGAGCAACGCCTTCGCCAGGATTTAAGAGCAGTACGTGATGAGCTTGATAACCTAGATAGCCAAAGAGATTCTATAGAACAAAGGAAGGAAGCTCTAAGGAAGATGGAAAAGGAAATGATGAAAGCACAAAATATGCTTTCCATGTGTGTGTCAGTGACCAAAATCATGCCAAATTTTGAAGACAAGGACAAGATCTCTGGTTATATTGTTGATAAGAACATGAAGAAACTAGAGAGGTTCGAGTTTGACAAGACGACGCCCCCTGTTGATATCTGCAACAACCTTTGGAAGATGGTTTAGATGTTGCGTGGAGATAACGGTCGTGGACGATGGACCTCCCATCGAACATCCCTTTTTTTTTGTTATCACCGTTGAATGCTGCCAAAGGACCAAGATGCGTCCAGTTCGCATTTCATGCAGAGATCTACAGAAGTGCTATCTGTTTGTAGATTTGCTAAGATCAAGATCTCTTTAGCTAGTCCTTGGCTCGTTGCCATGTTCCTTTTAGTATGTGTAAGTACTAAGTTGTATAACATTTCACATGCTATTGTTATTCCGGAAGCTGCTCTCACTTGCAAAGCTGCAAGTTTGCAGCCCAATGCCATTT]
[+] EMBL OSC330               [                AAACTNTNGTCGGCGGCGACCTAAANGCCGGCGAGCTGAAGGGGAAGGNAGGGAAGCCGCCGGCGACCACCCACCGNACCTACCACCACCTCGGCCTCATACACCCTCCTCTCTGTGCGCGTNTTTNTCTCCGCCGGACTGCGGCGCGGGCGGAAGCGGGGTGGTTTTAGGGTTTTGGCCGGCGACCAGATGGCGGCGGAGGCGGGGATGCGCGTNAACGTGGCGAGTCTGCTCG CCTCGGGGACGACACCNTGGAGTTGCTCGGCGAGAGGAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_3792#0
AGAAAAGGAAGAAGAAAAACTCTCGTCGGCGGCGACCTAAACGCCGGCGAGCTGAAGGGG
AAGGGAGGGAAGCCGCCGGCGACCACCCACCGCACCTACCACCACCTCGGCCTCATACAC
CCTCCTCTCTGTGCGCGTCTTTCTCTCCGCCGGACTGCGGCGCGGGCGGAAGCGGGGTGG
TTTTAGGGTTTTGGCCGGCGACCAGATGGCGGCGGAGGCGGGGATGCGCGTGAACGTGGC
GAGTCTGCTCGCCCTCGGGGACGACACCGTGGAGTTGCTCGGCGAGAGGAAGGACGGCGA
GGCCCTCGCGCAGGCCTGCGCCGGGGCGCGGATGCTGCGTTCCGCCTGCCGCTCGGAGTC
CGACGACCTCGAGGTGCAAATGAAAGAGTATCAGGAAAAAATAAAGTCCTGCAAAGAAAA
GATAGAAAAGACAAAATCTGAAACAATTGCCGATGATGAACTGAATGCTCTGCAAAAAGA
GATGGAGGAGAAACTTCAAGATGAGCAACGCCTTCGCCAGGATTTAAGAGCAGTACGTGA
TGAGCTTGATAACCTAGATAGCCAAAGAGATTCTATAGAACAAAGGAAGGAAGCTCTAAG
GAAGATGGAAAAGGAAATGATGAAAGCACAAAATATGCTTTCCATGTGTGTGTCAGTGAC
CAAAATCATGCCAAATTTTGAAGACAAGGACAAGATCTCTGGTTATATTGTTGATAAGAA
CATGAAGAAACTAGAGAGGTTCGAGTTTGACAAGACGACGCCCCCTGTTGATATCTGCAA
CAACCTTTGGAAGATGGTTTAGATGTTGCGTGGAGATAACGGTCGTGGACGATGGACCTC
CCATCGAACATCCCTTTTTTTTTGTTATCACCGTTGAATGCTGCCAAAGGACCAAGATGC
GTCCAGTTCGCATTTCATGCAGAGATCTACAGAAGTGCTATCTGTTTGTAGATTTGCTAA
GATCAAGATCTCTTTAGCTAGTCCTTGGCTCGTTGCCATGTTCCTTTTAGTATGTGTAAG
TACTAAGTTGTATAACATTTCACATGCTATTGTTATTCCGGAAGCTGCTCTCACTTGCAA
AGCTGCAAGTTTGCAGCCCAATGCCATTT

clustalw multiple alignements is not computed in this case