cluster # 3812

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Oryza sativa
cluster # 3812 cluster # 3812 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3812#0 length = 890 sequences # 2

consensusID : consensus_3812#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 890
fasta sequence

                              [AAACAAT-TAAAACCGTAGAAGATCCATAATAGAATAAGGCATATAATGGCTCAATGGCTCTAAGTAAGAAAAGCTTTATCAGATTCTATTTTCCGAAGTTGCACCTACAACTATTCATTGAAAAGAATCCTACTCTTATGGGTAAATGCTCAATATCCAAGTGGGCTTACAAATTTGATCATGATCAATTGCTTTGTGGATTGTCTCGCGTCTCTTGATTAGTTGGTATTTATCCCCCCCAATATTGCAAGTTTCTTACGTCCAAACAAAGTATTTACTTGTTACTAATAAAAAATCAAAAAGTTTAGCCTACGTTCTTCCTTAGATCCCTTCTTTTACTCCGATAGTATTGCAGATCGCAATCGATGCAAAGAAAATGAATGCATTTCCATACTATAATAAAAAGTAAGTGTAATAAATAGAGAATTGGATCATGTCACATGACTTATTCCATTTCTACTCTATGGGATCTTACGGAGCCTCTTCATGGATGACATGGTTGAGGTATGATCATAGAAAATATTCTCCTCAAGTGAACCAGCCTATCCTTACTAGACAGGGGACTTACGTGTTGATTGGATATGGAGACACCTTTGGTCGTGAATTCTAATGTGGCAGATCCAACTCTCTATCTGCATGGCCAAATCAATAATTCAAGTCGCACACTCCAATAATCCGCCTTCTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTATTTGTATCACAATAGTTCGGAGTTGAAGAGAAGTATCTAAATGACATGTCTTATTTTAGAATAACCCATGTTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGAGAATTAGAACTCTCTATGAGATGCCTTCCTTATAAAGGGCCCGAAATACCTTGCTT]

[+] EMBL CB633454             [AAACAAT TAAAACCGTAGAAGATCCATAATAGAATAAGGCATATAATGGCTCAATGGCTCTAAGTAAGAAAAGCTTTATCAGATTCTATTTTCCGAAGTTGCACCTACAACTATTCATTGAAAAGAATCCTACTCTTATGGGTAAATGCTCAATATCCAAGTGGGCTTACAAATTTGATCATGATCAATTGCTTTGTGGATTGTCTCGCGTCTCTTGATTAGTTGGTATTTATCCCCCCCAATATTGCAAGTTTCTTACGTCCAAACAAAGTATTTACTTGTTACTAATAAAAAATCAAAAAGTTTAGCCTACGTTCTTCCTTAGATCCCTTCTTTTACTCCGATAGTATTGCAGATCGCAATCGATGCAAAGAAAATGAATGCATTTCCATACTATAATAAAAAGTAAGTGTAATAAATAGAGAATTGGATCATGTCACATGACTTATTCCATTTCTACTCTATGGGATCTTACGGAGCCTCTTCATGGATGACATGGTTGAGGTATGATCATAGAAAATATTCTCCTCAAGTGAACCAGCCTATCCTTACTAGACAGGGGACTTACGTGTTGATTGGATATGGAGACACCTTTGGTCGTGAATTCTAATGTGGCAGATCCAACTCTCTATCTGCATGGCCAAATCAATAATTCAAGTCGCACACTCCAATAATCCGCCTTCTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTATTTGTATCACAATAGTTCGGAGTTGAAGAGAAGTATCTAAATGACATGTCTTATTTTAGAATAACCCATGTTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGAGAATTAGAACTCTCTATGAGATGCCTTCCTTATAAAGGGCCCGAAATACCTTGCTT]
[+] EMBL CB633807             [ AACGATATAAAACCGTAGAAGATCCATAATAGAATAAGGTATACATTGGCTCAATGGCTCTAAGTAAGAAAAGCTTTATCAGATTCTATTTTCCGAAGTTGCACCTACAACTATTCCTTGAAAAGAATCCTACTCTTATGGGTAAATGCTCAATATCCAAGTGGGCTTACAAATTTGATCATGATCAATTGCTTTGTGGATTGTCTCGCGTCTCTTGATTAGTTGGTATTTATCCCCCCCAATATTGCAAGTTTCTTACGTCCAAACAAAGTATTTACTTGTTACTAATAAAAAATCAAAAAGTTTAGCCTACGTTCTTCCTTAGATCCCTTCTTTTACTCCGATAGTATTGCAGATCGCAATCGATGCAAAGAAAATGAATGCATTTCCATACTATAATAAAAAGTAAGTGTAATAAATAGAGAATTGGATCATGTCACATGACTTATTCCATTTCTACTCTATGGGATCTTACGGAGCCTCTTCATGGATGACATGGTTGAGGTATGATCATAGAAAATATTCTCCTCAAGTGAACCAGCCTATCCTTACTAGACAGGGGACTTACGTGTTGATTGGATATGGAGACACCTTTGGTCGTGAATTCTAATGTGGCAGATCCAACTCTCTATCTGCATGGCCAAATCAATAATTCAAGTCGCACACTCCAATAATCCGCCTTCTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTATTTGTATCACAATAGTTCGGAGTTGAAGAGAAGTATCTAAATGACATGTCTTATTTTAGAATAACCCATGTTTGTAGCAATGAAATACCACAACCTACCCGAT                                                                   ]




>consensus_3812#0
AAACAATTAAAACCGTAGAAGATCCATAATAGAATAAGGCATATAATGGCTCAATGGCTC
TAAGTAAGAAAAGCTTTATCAGATTCTATTTTCCGAAGTTGCACCTACAACTATTCATTG
AAAAGAATCCTACTCTTATGGGTAAATGCTCAATATCCAAGTGGGCTTACAAATTTGATC
ATGATCAATTGCTTTGTGGATTGTCTCGCGTCTCTTGATTAGTTGGTATTTATCCCCCCC
AATATTGCAAGTTTCTTACGTCCAAACAAAGTATTTACTTGTTACTAATAAAAAATCAAA
AAGTTTAGCCTACGTTCTTCCTTAGATCCCTTCTTTTACTCCGATAGTATTGCAGATCGC
AATCGATGCAAAGAAAATGAATGCATTTCCATACTATAATAAAAAGTAAGTGTAATAAAT
AGAGAATTGGATCATGTCACATGACTTATTCCATTTCTACTCTATGGGATCTTACGGAGC
CTCTTCATGGATGACATGGTTGAGGTATGATCATAGAAAATATTCTCCTCAAGTGAACCA
GCCTATCCTTACTAGACAGGGGACTTACGTGTTGATTGGATATGGAGACACCTTTGGTCG
TGAATTCTAATGTGGCAGATCCAACTCTCTATCTGCATGGCCAAATCAATAATTCAAGTC
GCACACTCCAATAATCCGCCTTCTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTA
TTTGTATCACAATAGTTCGGAGTTGAAGAGAAGTATCTAAATGACATGTCTTATTTTAGA
ATAACCCATGTTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGAGAATTA
GAACTCTCTATGAGATGCCTTCCTTATAAAGGGCCCGAAATACCTTGCTT

clustalw multiple alignements is not computed in this case