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Oryza sativa
cluster # 3843 cluster # 3843       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3843#0 length = 2288 sequences # 2  

consensusID : consensus_3843#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2288
fasta sequence
                              [TAGAATTGCCAGAGTAATCGGAGCTCCGGTTCCGATCCCTGTCCATGGCGCGCTGCGGCGGCGAAAGGATGGTGGACGAGCTGCGCGACGTGCTGGACGACTTCGCGTTCCGGGCCAAGCGGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACGGCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCGTGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGGCCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGTTCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCTTCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACGATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTGAGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGCGGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCTACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACATCTACAATGATGGGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCCAAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTTGCGGCTTCGCTGAGATG-AATCAACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGCGATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGTCTACTCCGCTGGACAAGCTTGCTGGTTCCTCTAAAATCTGCTGCACCTGGTAGTAGAATTGTAGTGACGACTAGAAGTGCTAAAGTTGCTCGAATGATGGCATTCAAGATACACCAACTGGGGTACCTCACTGATACTACCTGCTGGTCTGTGTGCCGAAATGCTGCCTTGCAAGACCGTGATCCTAGTATTATTGATGACGGCTTGATTTCTATAGGTAAATCTGTTGCAGCCAAGTGCAAAGGCTTGCCATTGGCTGCAAATGCAGCAGGAAGTGTTCTATCCATTGCAATTGATAGGAAGCACTGGGAGACTGTTGAGCAAAGTGACTTGTGGGCTAACAATGAAGTGATTGATCATACCCTTCCTGCTCTTCTAGTGAGCTACAATAGCTTACAGAAGCCTTTGAAACATTGTTTCTCGTATTGCTCGCTGTTTCCGAAGGAGTATGTGTTTAGAAAAGACAAGCTGGTCAGGCTATGGTTGGCACAAGGCTTTGCTGCAGCAGATGGAGAAAGCGATGCTGAAGATATTGCTTGCAGGTACTTTCATAACCTCGTGGAGAGGTTCTTTCTTCAGCAATCTCCATCTTATGACCATAACGAGCAAAGGTATGTCATGCATGATCTCTACCATGAGCTTGCTGAGTACGTAGCAGCCGATGAGTACTCTAGAATAGAGAGATTTACATTGAGCAACGTAAATGGAGAAGCTCGCCATCTATCCTTGACTCCAAGCGAGACTCATTCTCATGAAATAGGAGAATTTCATGCATCCAATAACAAATATATGAATGAATCCCAATACCCTGGCCTGCGAACTTTGCTGGTTGTCCAGAGAACCAAACATGACGATGGAAGAAAAACTTCGAGCATACAAAAACCAAGTGTTCTGTTCAAAGCTTTTGTATGTTTAAGGGCTCTGGATTTGAGTAATACTGACATGGAGGGCCTGCCAAACTCTATTGGGGAACTGATACACCTTAGGTACCTCAGTCTTGAGAACACCAAAATCAAGTGCCTGCCAGAGTCAATAAGTTCTCTATTCAAGTTGCACACGATGAACCTCAAGTGTTGCAACTATCTTAGTGAGCTGCCACAAGGGATAAAATTCCTTGCTAACTTAAGGCATCTTGAACTACCACGCATAGATAACTGGAATGTGTACATGCCATGTGGAATTTCTGAATTAACTAATCTCCAAACAATGCACACGATCAAGTTCACAAGTGATTCAGGAAGTTGTGGGATTGCTGACTTGGTTAACTTGGACAATCTTAGAGGTGAGCTGTGCATATCAGGCATAGAGAACGTAAGCAAAGAACAAATTGCTACAGAAGCTATCATGAAG]

[+] EMBL AK067204             [TAGAATTGCCAGAGTAATCGGAGCTCCGGTTCCGATCCCTGTCCATGGCGCGCTGCGGCGGCGAAAGGATGGTGGACGAGCTGCGCGACGTGCTGGACGACTTCGCGTTCCGGGCCAAGCGGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACGGCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCGTGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGGCCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGTTCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCTTCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACGATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTGAGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGCGGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCTACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACATCTACAATGATGGGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCCAAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTTGCGGCTTCGCTGAGATG AATCAACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGCGATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGTCTACTCCGCTGGACAAGCTTGCTGGTTCCTCTAAAATCTGCTGCACCTGGTAGTAGAATTGTAGTGACGACTAGAAGTGCTAAAGTTGCTCGAATGATGGCATTCAAGATACACCAACTGGGGTACCTCACTGATACTACCTGCTGGTCTGTGTGCCGAAATGCTGCCTTGCAAGACCGTGATCCTAGTATTATTGATGACGGCTTGATTTCTATAGGTAAATCTGTTGCAGCCAAGTGCAAAGGCTTGCCATTGGCTGCAAATGCAGCAGGAAGTGTTCTATCCATTGCAATTGATAGGAAGCACTGGGAGACTGTTGAGCAAAGTGACTTGTGGGCTAACAATGAAGTGATTGATCATACCCTTCCTGCTCTTCTAGTGAGCTACAATAGCTTACAGAAGCCTTTGAAACATTGTTTCTCGTATTGCTCGCTGTTTCCGAAGGAGTATGTGTTTAGAAAAGACAAGCTGGTCAGGCTATGGTTGGCACAAGGCTTTGCTGCAGCAGATGGAGAAAGCGATGCTGAAGATATTGCTTGCAGGTACTTTCATAACCTCGTGGAGAGGTTCTTTCTTCAGCAATCTCCATCTTATGACCATAACGAGCAAAGGTATGTCATGCATGATCTCTACCATGAGCTTGCTGAGTACGTAGCAGCCGATGAGTACTCTAGAATAGAGAGATTTACATTGAGCAACGTAAATGGAGAAGCTCGCCATCTATCCTTGACTCCAAGCGAGACTCATTCTCATGAAATAGGAGAATTTCATGCATCCAATAACAAATATATGAATGAATCCCAATACCCTGGCCTGCGAACTTTGCTGGTTGTCCAGAGAACCAAACATGACGATGGAAGAAAAACTTCGAGCATACAAAAACCAAGTGTTCTGTTCAAAGCTTTTGTATGTTTAAGGGCTCTGGATTTGAGTAATACTGACATGGAGGGCCTGCCAAACTCTATTGGGGAACTGATACACCTTAGGTACCTCAGTCTTGAGAACACCAAAATCAAGTGCCTGCCAGAGTCAATAAGTTCTCTATTCAAGTTGCACACGATGAACCTCAAGTGTTGCAACTATCTTAGTGAGCTGCCACAAGGGATAAAATTCCTTGCTAACTTAAGGCATCTTGAACTACCACGCATAGATAACTGGAATGTGTACATGCCATGTGGAATTTCTGAATTAACTAATCTCCAAACAATGCACACGATCAAGTTCACAAGTGATTCAGGAAGTTGTGGGATTGCTGACTTGGTTAACTTGGACAATCTTAGAGGTGAGCTGTGCATATCAGGCATAGAGAACGTAAGCAAAGAACAAATTGCTACAGAAGCTATCATGAAG]
[+] EMBL CB634337             [                                                                                       ACGTGCTGGACGACTTCGCGTTCCGGGCCAAGCGGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACGGCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCGTGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGGCCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGTTCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCTTCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACGATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTGAGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGCGGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCTACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACATCTACAATGATGAGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCCAAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTTGCGGCTTCGCTGAGATGAAATC ACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGCGATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_3843#0 TAGAATTGCCAGAGTAATCGGAGCTCCGGTTCCGATCCCTGTCCATGGCGCGCTGCGGCG GCGAAAGGATGGTGGACGAGCTGCGCGACGTGCTGGACGACTTCGCGTTCCGGGCCAAGC GGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACG GCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCG TGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGG CCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGT TCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCT TCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACG ATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTG AGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGC GGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCT ACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACA TCTACAATGATGGGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCC AAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTT GCGGCTTCGCTGAGATGAATCAACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGC GATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGTCTACTCCGCTGGACAAGCTTGC TGGTTCCTCTAAAATCTGCTGCACCTGGTAGTAGAATTGTAGTGACGACTAGAAGTGCTA AAGTTGCTCGAATGATGGCATTCAAGATACACCAACTGGGGTACCTCACTGATACTACCT GCTGGTCTGTGTGCCGAAATGCTGCCTTGCAAGACCGTGATCCTAGTATTATTGATGACG GCTTGATTTCTATAGGTAAATCTGTTGCAGCCAAGTGCAAAGGCTTGCCATTGGCTGCAA ATGCAGCAGGAAGTGTTCTATCCATTGCAATTGATAGGAAGCACTGGGAGACTGTTGAGC AAAGTGACTTGTGGGCTAACAATGAAGTGATTGATCATACCCTTCCTGCTCTTCTAGTGA GCTACAATAGCTTACAGAAGCCTTTGAAACATTGTTTCTCGTATTGCTCGCTGTTTCCGA AGGAGTATGTGTTTAGAAAAGACAAGCTGGTCAGGCTATGGTTGGCACAAGGCTTTGCTG CAGCAGATGGAGAAAGCGATGCTGAAGATATTGCTTGCAGGTACTTTCATAACCTCGTGG AGAGGTTCTTTCTTCAGCAATCTCCATCTTATGACCATAACGAGCAAAGGTATGTCATGC ATGATCTCTACCATGAGCTTGCTGAGTACGTAGCAGCCGATGAGTACTCTAGAATAGAGA GATTTACATTGAGCAACGTAAATGGAGAAGCTCGCCATCTATCCTTGACTCCAAGCGAGA CTCATTCTCATGAAATAGGAGAATTTCATGCATCCAATAACAAATATATGAATGAATCCC AATACCCTGGCCTGCGAACTTTGCTGGTTGTCCAGAGAACCAAACATGACGATGGAAGAA AAACTTCGAGCATACAAAAACCAAGTGTTCTGTTCAAAGCTTTTGTATGTTTAAGGGCTC TGGATTTGAGTAATACTGACATGGAGGGCCTGCCAAACTCTATTGGGGAACTGATACACC TTAGGTACCTCAGTCTTGAGAACACCAAAATCAAGTGCCTGCCAGAGTCAATAAGTTCTC TATTCAAGTTGCACACGATGAACCTCAAGTGTTGCAACTATCTTAGTGAGCTGCCACAAG GGATAAAATTCCTTGCTAACTTAAGGCATCTTGAACTACCACGCATAGATAACTGGAATG TGTACATGCCATGTGGAATTTCTGAATTAACTAATCTCCAAACAATGCACACGATCAAGT TCACAAGTGATTCAGGAAGTTGTGGGATTGCTGACTTGGTTAACTTGGACAATCTTAGAG GTGAGCTGTGCATATCAGGCATAGAGAACGTAAGCAAAGAACAAATTGCTACAGAAGCTA TCATGAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)