cluster # 3853

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Oryza sativa
cluster # 3853 cluster # 3853 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3853#0 length = 451 sequences # 2

consensusID : consensus_3853#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 451
fasta sequence

                              [CAAGGTCAGAGATGTCACCTTTTCCTTTCCACTATAGTCGTCGACCTCGAACTCCACATGAGTCTCAGCCTCCCTCTTGTCTTCCTTCAGATGTTCCAACTAGTACCATTAATGCTCAATCTGATGATCCACCCGTTGCTCCGCTCATTGATGATCCACTTGTGTCATCACCACAGTCTGCTACACCACGATATGGTCTTCGAGATCGCAGCAAGATAATGCCTCATCCTCGCTATATGTGTGCAGCAATTGATGGTGTTCAGGAGCCTAGTACATATCAAGAGGCTGCTGCCATTCCTGAGTGGCAATTGGCTATGACAGAGGAGCTTGCTGCCTTAGAGC-GAACAAGAACCTGGGATATTGTT-CCTC-TTCCTTGTCAT-GCCAT-TCC-AATTACTTG-CAAGTGGGTGTTTAAGGTG-AAGAC-TCGCT-CTGATGGCTCTATTGAGCGCTACAA]

[+] EMBL C96904               [CAAGGTCAGAGATGTCACCTTTTCCTTTCCACTATAGTCGTCGACCTCGAACTCCACATGAGTCTCAGCCTCCCTCTTGTCTTCCTTCAGATGTTCCAACTAGTACCATTAATGCTCAATCTGATGATCCACCCGTTGCTCCGCTCATTGATGATCCACTTGTGTCATCACCACAGTCTGCTACACCACGATATGGTCTTCGAGATCGCAGCAAGATAATGCCTCATCCTCGCTATATGTGTGCAGCAATTGATGGTGTTCAGGAGCCTAGTACATATCAAGAGGCTGCTGCCATTCCTGAGTGGCAATTGGCTATGACAGAGGAGCTTGCTGCCTTAGAGC GAACAAGAACCTGGGATATTGTT CCTC TTCCTTGTCAT GCCAT TCC AATTACTTG CAAGTGGGTGTTTAAGGTG AAGAC TCGCT CTGATGGCTCTATTGAGCGCTACAA]
[+] EMBL AU070822             [CAAGGTCAGAGATGTCACCTTTTCCTTTCCACTATAGTCGTCGACCTCGAACTCCACATGAGTCTCAGCCTCCCTCTTGTCTTCCTTCAGATGTTCCAACTAGTACCATTAATGCTCAATCTGATGATCCACCCGTTGCTCCGCTCATTGATGATCCACTTGTGTCATCACCACAGTCTGCTACACCACGATATGGTCTTCGAGATCGCAGCAAGATAATGCCTCATCCTCGCTATATGTGTGCAGCAATTGATGGTGTTCAGGAGCCTAGTACATATCAAGAGGCTGCTGCCATTCCTGAGTGGCAATTGGCTATGACAGAGGAGCTTGCTGCCTTAGAGCGGAACAAGAACCTGGGATANTGTTNCCTCTTTCCTTGTCATGGCCATATCCNAATTACTTGACAANTGGGTGTTTAAGGTGTAAGACTTCGCTCCTGA                     ]




>consensus_3853#0
CAAGGTCAGAGATGTCACCTTTTCCTTTCCACTATAGTCGTCGACCTCGAACTCCACATG
AGTCTCAGCCTCCCTCTTGTCTTCCTTCAGATGTTCCAACTAGTACCATTAATGCTCAAT
CTGATGATCCACCCGTTGCTCCGCTCATTGATGATCCACTTGTGTCATCACCACAGTCTG
CTACACCACGATATGGTCTTCGAGATCGCAGCAAGATAATGCCTCATCCTCGCTATATGT
GTGCAGCAATTGATGGTGTTCAGGAGCCTAGTACATATCAAGAGGCTGCTGCCATTCCTG
AGTGGCAATTGGCTATGACAGAGGAGCTTGCTGCCTTAGAGCGAACAAGAACCTGGGATA
TTGTTCCTCTTCCTTGTCATGCCATTCCAATTACTTGCAAGTGGGTGTTTAAGGTGAAGA
CTCGCTCTGATGGCTCTATTGAGCGCTACAA

clustalw multiple alignements is not computed in this case