cluster # 3860

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Oryza sativa
cluster # 3860 cluster # 3860 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3860#0 length = 1124 sequences # 2

consensusID : consensus_3860#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1124
fasta sequence

                              [TTCATTTTCTCTTAGCCAGCTTATTGCGGCAATTCCACGTGCAGATATATATTTCAGAATTAATGAAAAGCTTAGCTCTTTTGGCTCGTTGCAGTATAGCAAAATCATGGATATGGCTTTGGATAAGGCCATCAAAGAGATTATAGGTCCTGTCATTCAAAGAAGTGTTACAATAGCGAGCCGAACAACTAAGGAACTTATTCTAAAGGATTATGCAATGGAAGCGGATGATAGTGCCGTATCTCGTTCTGCACATTTGATGGTCGGTACACTAGCTGGAAGTCTTGCCCATGTTACATCCAAGGAACCTCTTCGTGTTGCTTTATCATCTCATCTTCGTAGTCTTATTCAGGGCATAACTAATAATACTGAATCCACAGAGCAGATTATGCTTATTCTTGTCAATGATAATCTGGATCTTGGATGTGCCCTAATAGAGACCGTTGCAACACGCAAGGCTGTTGAGATGATCGATGGGGAAATCAAGCAGCCCTTTTCACAACTAAGGAGACAAAAAGAACTACTTGGATCTGCATATTATGATGCTTTTCCTTACACTCAAGGTCTTAAGCGTGTTCCGGATGCTCTTCGTCCTAAGCCTACTGGCCATTTATCTGCTGCCCAACGACGAGTGTATGAGGACTTCATTACTGTATGGCACAGTCAGAGTAGTCAAAATGCGGGTGGTTCAGCTACTGCTACAGCGATGGCGGTCGCTCCAAGCAATTCCAGTGTACCTCGAGTTTACAGTCCAAATTCAGCACTGACAGACTCCAGTAGCTTTTCCT-CCATTTTGCATCTGCAAGTCAGACTACAGAACTGGTACATGAAGAATCAGATCGCAATGCACACCTTTCAAGCCTTTCTTCAAAAATTGGCGCGAGTGACACATCTACCCAAGTTATTGGAACCACAAATGTTGCATCTGTTTTTCCGCCTATGGTTCCCAATGACCTTCCAGTGGGTGAACCAACAACCACGAATAAAGATCTTGTTACTTCGGCACCACTTTCACCTACAACTGCTGTTGATCGGATGGGATCTGTTTTTGTGGAACCTTTGAATACTAGTGATGCGCTGGAGATGTACCAAACAGTTTCACAAAAGCTGGATACTTTGATCGC]

[+] EMBL CB634922             [TTCATTTTCTCTTAGCCAGCTTATTGCGGCAATTCCACGTGCAGATATATATTTCAGAATTAATGAAAAGCTTAGCTCTTTTGGCTCGTTGCAGTATAGCAAAATCATGGATATGGCTTTGGATAAGGCCATCAAAGAGATTATAGGTCCTGTCATTCAAAGAAGTGTTACAATAGCGAGCCGAACAACTAAGGAACTTATTCTAAAGGATTATGCAATGGAAGCGGATGATAGTGCCGTATCTCGTTCTGCACATTTGATGGTCGGTACACTAGCTGGAAGTCTTGCCCATGTTACATCCAAGGAACCTCTTCGTGTTGCTTTATCATCTCATCTTCGTAGTCTTATTCAGGGCATAACTAATAATACTGAATCCACAGAGCAGATTATGCTTATTCTTGTCAATGATAATCTGGATCTTGGATGTGCCCTAATAGAGACCGTTGCAACACGCAAGGCTGTTGAGATGATCGATGGGGAAATCAAGCAGCCCTTTTCACAACTAAGGAGACAAAAAGAACTACTTGGATCTGCATATTATGATGCTTTTCCTTACACTCAAGGTCTTAAGCGTGTTCCGGATGCTCTTCGTCCTAAGCCTACTGGCCATTTATCTGCTGCCCAACGACGAGTGTATGAGGACTTCATTACTGTATGGCACAGTCAGAGTAGTCAAAATGCGGGTGGTTCAGCTACTGCTACAGCGATGGCGGTCGCTCCAAGCAATTCCAGTGTACCTCGAGTTTACAGTCCAAATTCAGCACTGACAGACTCCAGTAGCTTTTCCT CCATTTTGCATCTGCA                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB649844             [                                                                                                                                                                                                                                                                                                                               GCTTTATCATCTCATCTTCGTAGTCTTATTCAGGGCATAACTAATAATACTGAATCCACAGAGCAGATTATGCTTATTCTTGTCAATGATAATCTGGATCTTGGATGTGCCCTAATAGAGACCGTTGCAACACGCAAGGCTGTTGAGATGATCGATGGGGAAATCAAGCAGCCCTTTTCACAACTAAGGAGACAAAAAGAACTACTTGGATCTGCATATTATGATGCTTTTCCTTACACTCAAGGTCTTAAGCGTGTTCCGGATGCTCTTCGTCCTAAGCCTACTGGCCATTTATCTGCTGCCCAACGACGAGTGTATGAGGACTTCATTACTGTATGGCACAGTCAGAGTAGTCAAAATGCGGGTGGTTCAGCTACTGCTACAGCGATGGCGGTCGCTCCAAGCAATTCCAGTGTACCTCGAGTTTACAGTCCAAATTCAGCACTGACAGACTCCAGTAGCTTTTCCTCCCATTTTGCATCTGCAAGTCAGACTACAGAACTGGTACATGAAGAATCAGATCGCAATGCACACCTTTCAAGCCTTTCTTCAAAAATTGGCGCGAGTGACACATCTACCCAAGTTATTGGAACCACAAATGTTGCATCTGTTTTTCCGCCTATGGTTCCCAATGACCTTCCAGTGGGTGAACCAACAACCACGAATAAAGATCTTGTTACTTCGGCACCACTTTCACCTACAACTGCTGTTGATCGGATGGGATCTGTTTTTGTGGAACCTTTGAATACTAGTGATGCGCTGGAGATGTACCAAACAGTTTCACAAAAGCTGGATACTTTGATCGC]




>consensus_3860#0
TTCATTTTCTCTTAGCCAGCTTATTGCGGCAATTCCACGTGCAGATATATATTTCAGAAT
TAATGAAAAGCTTAGCTCTTTTGGCTCGTTGCAGTATAGCAAAATCATGGATATGGCTTT
GGATAAGGCCATCAAAGAGATTATAGGTCCTGTCATTCAAAGAAGTGTTACAATAGCGAG
CCGAACAACTAAGGAACTTATTCTAAAGGATTATGCAATGGAAGCGGATGATAGTGCCGT
ATCTCGTTCTGCACATTTGATGGTCGGTACACTAGCTGGAAGTCTTGCCCATGTTACATC
CAAGGAACCTCTTCGTGTTGCTTTATCATCTCATCTTCGTAGTCTTATTCAGGGCATAAC
TAATAATACTGAATCCACAGAGCAGATTATGCTTATTCTTGTCAATGATAATCTGGATCT
TGGATGTGCCCTAATAGAGACCGTTGCAACACGCAAGGCTGTTGAGATGATCGATGGGGA
AATCAAGCAGCCCTTTTCACAACTAAGGAGACAAAAAGAACTACTTGGATCTGCATATTA
TGATGCTTTTCCTTACACTCAAGGTCTTAAGCGTGTTCCGGATGCTCTTCGTCCTAAGCC
TACTGGCCATTTATCTGCTGCCCAACGACGAGTGTATGAGGACTTCATTACTGTATGGCA
CAGTCAGAGTAGTCAAAATGCGGGTGGTTCAGCTACTGCTACAGCGATGGCGGTCGCTCC
AAGCAATTCCAGTGTACCTCGAGTTTACAGTCCAAATTCAGCACTGACAGACTCCAGTAG
CTTTTCCTCCATTTTGCATCTGCAAGTCAGACTACAGAACTGGTACATGAAGAATCAGAT
CGCAATGCACACCTTTCAAGCCTTTCTTCAAAAATTGGCGCGAGTGACACATCTACCCAA
GTTATTGGAACCACAAATGTTGCATCTGTTTTTCCGCCTATGGTTCCCAATGACCTTCCA
GTGGGTGAACCAACAACCACGAATAAAGATCTTGTTACTTCGGCACCACTTTCACCTACA
ACTGCTGTTGATCGGATGGGATCTGTTTTTGTGGAACCTTTGAATACTAGTGATGCGCTG
GAGATGTACCAAACAGTTTCACAAAAGCTGGATACTTTGATCGC

clustalw multiple alignements is not computed in this case