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Oryza sativa
cluster # 3863 cluster # 3863       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3863#0 length = 1593 sequences # 2  

consensusID : consensus_3863#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1593
fasta sequence
                              [TTGTCTTACTGGGCTGCTCTGTATCTTGATAACGTTGATTTTGGCTCAAGATATATTGACCAAGGTTTGCCTCGCATTTCTGTTTGGAAGGATGACATGATTTCAGTATTCTCTGACTTAGACAAAATAGATGATAACACCTTTGGACTAAGGCCTCTCAAGGATTTCCGAGCAACATGCTATTTTCAGCCCAAACCTACACATTCTAGGTCAAATGCAATTAGAGCTAAACTAGATTCAGCCATTGGCAGTATGATTCCAGATTGTCTCAAGGAGAAAATTTCTGAATTGTTGAGTAGCCATTTCTGCAGTCACCATGTACTTGACAGTGAGCCATGTGAAGATATATTGATTTCTATATTGGCTTTACTTGCTGAATCAAGTCAATTTCATCCACTAGAAGTTCCAACAACCCATATCTCTCCTCAAATAAACACTGAAGCTGGACCTAGTAACCGTGAACCTACAAGTCCAAAAGCAAGGCAATCTGATTTTTGTGTTTTAAATGATGATGGTGTTCGATCTCCTGCTAAACACACCAGTTTAAGCAATGTTGAATTGTATGAGAAATCTGTTTCAAGATCTACTGGAAAGGGCTGTACATCTCTTGATAGAATCGCAGATTTATATGGTTCTATAGCCAACTGCGATGATGACAACATGTTGCTGAATAATCTGTCAGCACACCCCAAGGCTGTCGTTACTCCTTGTGGTAATGCTAATGCTTCAAGCTCTCATGAAGATGAACCTTTGTTGACTCCAGATGTTGCATATTTGAGAACTAGGAAACACATTCTGAATGAAACTAATGAAGGTCCTTCTTTTGCTGCTCTCAGCCTTGTCAAGAATGTTGCAAATAAGTTTAGGTCCAGAATAACACATTTCAATAGTAGAACTCCTTTTTTGGGCGAAGAAATGCCATCATTTAAGTTGTTAGATTCAGATGATGATATTAGTGATTGTGACAAAGAGAATGAAGTTGCTGAAGCTATAACACCTGCTTGTTCTCAGGTATTTTTTTTTGCTAAGTTTTTGTTTTGAATATTTCATGAAACAATTTTTTTTATTGTACCATTGTAGGATTTTCTCTCTTTTCATTCTGTTGAGGACACTCCTGATGATATGATTCGTGGCAATTCAAATTTGCATACATCTCTAAGAAACAACTGTGGAAATATGAGCAAGAGGTTATTTCGAGATTTAACAGTAAGTTATACTTTTCTAATAATTTTGATTAGTATGTTCAATTTGTTATCTTACTGTATAAAGTTGTGTTAGCAGCTGTTTTAATGTAGTGTTGAGCTTTGTTTTTTAGTTTTCTTAATCTTTTTACTAATTTATTCAGTGTTATAGTAAATTTAGTCTTGGTAATTTAGTATTTCACTTCACCTCTATAGAGTTGTTGCTTACTGTCCTTTGTGGAAGTAAAGAAGCAAGATGGTATGGTTCTGTGCTGTCATTTTATAGATTTTTCTTGTTTTGTTTTCTTTTCCTGATCTAAATTTCATTTTTCTTTTTCCCCTGATGTGCGCTCTGAATTTCATTTCCTCTTTTTCATGATCTGTATTCTGAATTTTCATTTTCCTCTTGGCT]

[+] EMBL CB635199             [TTGTCTTACTGGGCTGCTCTGTATCTTGATAACGTTGATTTTGGCTCAAGATATATTGACCAAGGTTTGCCTCGCATTTCTGTTTGGAAGGATGACATGATTTCAGTATTCTCTGACTTAGACAAAATAGATGATAACACCTTTGGACTAAGGCCTCTCAAGGATTTCCGAGCAACATGCTATTTTCAGCCCAAACCTACACATTCTAGGTCAAATGCAATTAGAGCTAAACTAGATTCAGCCATTGGCAGTATGATTCCAGATTGTCTCAAGGAGAAAATTTCTGAATTGTTGAGTAGCCATTTCTGCAGTCACCATGTACTTGACAGTGAGCCATGTGAAGATATATTGATTTCTATATTGGCTTTACTTGCTGAATCAAGTCAATTTCATCCACTAGAAGTTCCAACAACCCATATCTCTCCTCAAATAAACACTGAAGCTGGACCTAGTAACCGTGAACCTACAAGTCCAAAAGCAAGGCAATCTGATTTTTGTGTTTTAAATGATGATGGTGTTCGATCTCCTGCTAAACACACCAGTTTAAGCAATGTTGAATTGTATGAGAAATCTGTTTCAAGATCTACTGGAAAGGGCTGTACATCTCTTGATAGAATCGCAGATTTATATGGTTCTATAGCCAACTGCGATGATGACAACATGTTGCTGAATAATCTGTCAGCACACCCCAAGGCTGTCGTTACTCCTTGTGGTAATGCTAATGCTTCAAGCTCTCATGAAGATGAACCTTTGTTGACTCCAGATGTTGCATATTTGAGAACTAGGAAACACATTCTGAATGAAACTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB635035             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tctctcTGACTCCAGATGTTGCATATTTGAGAACTAGGAACAACATTCTGAATGAAACTAATGAAGGTCCTTCTTTTGCTGCTCTCAGCCTTGTCAAGAATGTTGCAAATAAGTTTAGGTCCAGAATAACACATTTCAATAGTAGAACTCCTTTTTTGGGCGAAGAAATGCCATCATTTAAGTTGTTAGATTCAGATGATGATATTAGTGATTGTGACAAAGAGAATGAAGTTGCTGAAGCTATAACACCTGCTTGTTCTCAGGTATTTTTTTTTGCTAAGTTTTTGTTTTGAATATTTCATGAAACAATTTTTTTTATTGTACCATTGTAGGATTTTCTCTCTTTTCATTCTGTTGAGGACACTCCTGATGATATGATTCGTGGCAATTCAAATTTGCATACATCTCTAAGAAACAACTGTGGAAATATGAGCAAGAGGTTATTTCGAGATTTAACAGTAAGTTATACTTTTCTAATAATTTTGATTAGTATGTTCAATTTGTTATCTTACTGTATAAAGTTGTGTTAGCAGCTGTTTTAATGTAGTGTTGAGCTTTGTTTTTTAGTTTTCTTAATCTTTTTACTAATTTATTCAGTGTTATAGTAAATTTAGTCTTGGTAATTTAGTATTTCACTTCACCTCTATAGAGTTGTTGCTTACTGTCCTTTGTGGAAGTAAAGAAGCAAGATGGTATGGTTCTGTGCTGTCATTTTATAGATTTTTCTTGTTTTGTTTTCTTTTCCTGATCTAAATTTCATTTTTCTTTTTCCCCTGATGTGCGCTCTGAATTTCATTTCCTCTTTTTCATGATCTGTATTCTGAATTTTCATTTTCCTCTTGGCT]


>consensus_3863#0 TTGTCTTACTGGGCTGCTCTGTATCTTGATAACGTTGATTTTGGCTCAAGATATATTGAC CAAGGTTTGCCTCGCATTTCTGTTTGGAAGGATGACATGATTTCAGTATTCTCTGACTTA GACAAAATAGATGATAACACCTTTGGACTAAGGCCTCTCAAGGATTTCCGAGCAACATGC TATTTTCAGCCCAAACCTACACATTCTAGGTCAAATGCAATTAGAGCTAAACTAGATTCA GCCATTGGCAGTATGATTCCAGATTGTCTCAAGGAGAAAATTTCTGAATTGTTGAGTAGC CATTTCTGCAGTCACCATGTACTTGACAGTGAGCCATGTGAAGATATATTGATTTCTATA TTGGCTTTACTTGCTGAATCAAGTCAATTTCATCCACTAGAAGTTCCAACAACCCATATC TCTCCTCAAATAAACACTGAAGCTGGACCTAGTAACCGTGAACCTACAAGTCCAAAAGCA AGGCAATCTGATTTTTGTGTTTTAAATGATGATGGTGTTCGATCTCCTGCTAAACACACC AGTTTAAGCAATGTTGAATTGTATGAGAAATCTGTTTCAAGATCTACTGGAAAGGGCTGT ACATCTCTTGATAGAATCGCAGATTTATATGGTTCTATAGCCAACTGCGATGATGACAAC ATGTTGCTGAATAATCTGTCAGCACACCCCAAGGCTGTCGTTACTCCTTGTGGTAATGCT AATGCTTCAAGCTCTCATGAAGATGAACCTTTGTTGACTCCAGATGTTGCATATTTGAGA ACTAGGAAACACATTCTGAATGAAACTAATGAAGGTCCTTCTTTTGCTGCTCTCAGCCTT GTCAAGAATGTTGCAAATAAGTTTAGGTCCAGAATAACACATTTCAATAGTAGAACTCCT TTTTTGGGCGAAGAAATGCCATCATTTAAGTTGTTAGATTCAGATGATGATATTAGTGAT TGTGACAAAGAGAATGAAGTTGCTGAAGCTATAACACCTGCTTGTTCTCAGGTATTTTTT TTTGCTAAGTTTTTGTTTTGAATATTTCATGAAACAATTTTTTTTATTGTACCATTGTAG GATTTTCTCTCTTTTCATTCTGTTGAGGACACTCCTGATGATATGATTCGTGGCAATTCA AATTTGCATACATCTCTAAGAAACAACTGTGGAAATATGAGCAAGAGGTTATTTCGAGAT TTAACAGTAAGTTATACTTTTCTAATAATTTTGATTAGTATGTTCAATTTGTTATCTTAC TGTATAAAGTTGTGTTAGCAGCTGTTTTAATGTAGTGTTGAGCTTTGTTTTTTAGTTTTC TTAATCTTTTTACTAATTTATTCAGTGTTATAGTAAATTTAGTCTTGGTAATTTAGTATT TCACTTCACCTCTATAGAGTTGTTGCTTACTGTCCTTTGTGGAAGTAAAGAAGCAAGATG GTATGGTTCTGTGCTGTCATTTTATAGATTTTTCTTGTTTTGTTTTCTTTTCCTGATCTA AATTTCATTTTTCTTTTTCCCCTGATGTGCGCTCTGAATTTCATTTCCTCTTTTTCATGA TCTGTATTCTGAATTTTCATTTTCCTCTTGGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)