cluster # 3870

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Oryza sativa
cluster # 3870 cluster # 3870 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3870#0 length = 941 sequences # 2

consensusID : consensus_3870#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 941
fasta sequence

                              [CCGACAGAGAACACCTCTGATAGGTATTAAATTTTCATGCCAGTCACAAATGACTTGAGAAAGAGTAAATACTCCCCTCCTCCCGAGACCCTCGTCCTTTCCCTCTCCACCATCTCTTCCTTCTTCCTCTCCAACTCTCTCGTCCTTCTACCTCTCCACCACCCCTACCAACGGCTAAGAGCTGCTACCTCCATCCCCCAATTGCCGAGCGCTGCCTTCGACTGTCGACCGCCGCTGCCTCCATCCCCAATCGCCAGGCGCCGGATCCGTCCTCCACGAGGTCAGGGGATACGGATCTGCTTGCCGAGCACCGTATCCTCCGTCCCTATGCATCACCGCCGCCTTCGACCACCAAGAGTCACTGCCTCCATCCCTCGACTGTCGGGCACTGAATCCACATGCCCCAACCTCGTCCGCCAAGCGCCACCGCCC-CATCCCCTGTCCGTCGGGCATCGGATCCGTCCTCCACAAGGTTAGGGATGCAGATCTGGCCATCGGGCGCCGTCTCATCCATCCCAGTGCTCTGGCCGCCACCTCCGATCGTCGGGCGACGCCACCTCCATCCTACAACCGCGGGACACCATCTCCTCAATCCCCGAGCATCGTCTGCCACCTCCGACCACCGCCTCCATCCTCGAGCACCCGCCACCATGGCCTCCACCACCGTGGCCTCCTCCAAGCTCCTTGGAATTGCAAGTGTTTTATTTGTTTGTGTTTTATGATTTGATTTTGTATATCGCAAGTGTTCGATGCCATGTTTCTGATTGAGGTGCTTATGGTTGAGATTGGAGTGATTGAGGTGTGTTATGATTGAGATCGGAGAAGTAGATGACTCATTATAGAAGAAGAGTTGGGTCTTTTCTTTACTCTTGTTTTTCCTCTAGGAAGAATCTTATTCTAGATATTGCTAAAAAAAAAAAACCCTGTGATGCCGTTACGTA]

[+] EMBL AK072475             [CCGACAGAGAACACCTCTGATAGGTATTAAATTTTCATGCCAGTCACAAATGACTTGAGAAAGAGTAAATACTCCCCTCCTCCCGAGACCCTCGTCCTTTCCCTCTCCACCATCTCTTCCTTCTTCCTCTCCAACTCTCTCGTCCTTCTACCTCTCCACCACCCCTACCAACGGCTAAGAGCTGCTACCTCCATCCCCCAATTGCCGAGCGCTGCCTTCGACTGTCGACCGCCGCTGCCTCCATCCCCAATCGCCAGGCGCCGGATCCGTCCTCCACGAGGTCAGGGGATACGGATCTGCTTGCCGAGCACCGTATCCTCCGTCCCTATGCATCACCGCCGCCTTCGACCACCAAGAGTCACTGCCTCCATCCCTCGACTGTCGGGCACTGAATCCACATGCCCCAACCTCGTCCGCCAAGCGCCACCGCCC CATCCCCTGTCCGTCGGGCATCGGATCCGTCCTCCACAAGGTTAGGGATGCAGATCTGGCCATCGGGCGCCGTCTCATCCATCCCAGTGCTCTGGCCGCCACCTCCGATCGTCGGGCGACGCCACCTCCATCCTACAACCGCGGGACACCATCTCCTCAATCCCCGAGCATCGTCTGCCACCTCCGACCACCGCCTCCATCCTCGAGCACCCGCCACCATGGCCTCCACCACCGTGGCCTCCTCCAAGCTCCTTGGAATTGCAAGTGTTTTATTTGTTTGTGTTTTATGATTTGATTTTGTATATCGCAAGTGTTCGATGCCATGTTTCTGATTGAGGTGCTTATGGTTGAGATTGGAGTGATTGAGGTGTGTTATGATTGAGATCGGAGAAGTAGATGACTCATTATAGAAGAAGAGTTGGGTCTTTTCTTTACTCTTGTTTTTCCTCTAGGAAGAATCTTATTCTAGATATTGCT                                ]
[-] EMBL CF305537             [                                                                                                                                                                                                                                                            GCCAGGCGCCGGATCCGTCCTCCACGAGGTCAGGGGATACGGATCTGCTTGCCGAGCACCGTATCCTCCGTCCCTATGCATCACCGCCGCCTTCGACCACCAAGAGTCACTGCCTCCATCCCTCGACTGTCGGGCACTGAATCCACATGCCCCAACCTCGTCCGCCAAGCGCCACCGCCCNCATCCCCTGTCCGTCGGGCATCGGATCCGTCCTCCACAAGGTTAGGGATGCAGATCTGGCCATCGGGCGCCGTCTCATCCATCCCAGTGCTCTGGCCGCCACCTCCGATCGTCGGGCGACGCCACCTCCATCCTACAACCGCGGGACACCATCTCCTCAATCCCCGAGCATCGTCTGCCACCTCCGACCACCGCCTCCATCCTCGAGCACCCGCCACCATGGCCTCCACCACCGTGGCCTCCTCCAAGCTCCTTGGAATTGCAAGTGTTTTATTTGTTTGTGTTTTATGATTTGATTTTGTATATCGCAAGTGTTCGATGCCATGTTTCTGATTGAGGTGCTTATGGTTGAGATTGGAGTGATTGAGGTGTGTTATGATTGAGATCGGAGAAGTAGATGACTCATTATAGAAGAAGAGTTGGGTCTTTTCTTTACTCTTGTTTTTCCTCTAGGAGGAATCTTATTCTAGAAAAAAAAAAAAAAAAAAAACCCTGTGATGCCGTTACGTA]




>consensus_3870#0
CCGACAGAGAACACCTCTGATAGGTATTAAATTTTCATGCCAGTCACAAATGACTTGAGA
AAGAGTAAATACTCCCCTCCTCCCGAGACCCTCGTCCTTTCCCTCTCCACCATCTCTTCC
TTCTTCCTCTCCAACTCTCTCGTCCTTCTACCTCTCCACCACCCCTACCAACGGCTAAGA
GCTGCTACCTCCATCCCCCAATTGCCGAGCGCTGCCTTCGACTGTCGACCGCCGCTGCCT
CCATCCCCAATCGCCAGGCGCCGGATCCGTCCTCCACGAGGTCAGGGGATACGGATCTGC
TTGCCGAGCACCGTATCCTCCGTCCCTATGCATCACCGCCGCCTTCGACCACCAAGAGTC
ACTGCCTCCATCCCTCGACTGTCGGGCACTGAATCCACATGCCCCAACCTCGTCCGCCAA
GCGCCACCGCCCCATCCCCTGTCCGTCGGGCATCGGATCCGTCCTCCACAAGGTTAGGGA
TGCAGATCTGGCCATCGGGCGCCGTCTCATCCATCCCAGTGCTCTGGCCGCCACCTCCGA
TCGTCGGGCGACGCCACCTCCATCCTACAACCGCGGGACACCATCTCCTCAATCCCCGAG
CATCGTCTGCCACCTCCGACCACCGCCTCCATCCTCGAGCACCCGCCACCATGGCCTCCA
CCACCGTGGCCTCCTCCAAGCTCCTTGGAATTGCAAGTGTTTTATTTGTTTGTGTTTTAT
GATTTGATTTTGTATATCGCAAGTGTTCGATGCCATGTTTCTGATTGAGGTGCTTATGGT
TGAGATTGGAGTGATTGAGGTGTGTTATGATTGAGATCGGAGAAGTAGATGACTCATTAT
AGAAGAAGAGTTGGGTCTTTTCTTTACTCTTGTTTTTCCTCTAGGAAGAATCTTATTCTA
GATATTGCTAAAAAAAAAAAACCCTGTGATGCCGTTACGTA

clustalw multiple alignements is not computed in this case