cluster # 3874

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Oryza sativa
cluster # 3874 cluster # 3874 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3874#0 length = 3045 sequences # 2
consensusID : consensus_3874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3045
fasta sequence
                              [AGCTACAGCTAGTCTTCCACAAACATAACAGCAACAACATCCATAGTAGCGGATAGATGATTCCTATAGGAACTCTCACTCCCTCACTTCTCACTTTTGCTGTCCTGTATGCTTTCTTGACCCTCCCATTAATTCCGTCACTAAGTAGCACCGCACTCGATGATGAATCCAACAAGGATCTCCAGGCCCTCCTTTGTCTCAAGTCTCGTCTCTCTAACAATGCAAGATCCCTAGCCTCATGGAACGAGTCTCTCCAATTTTGCACTTGGCCCGGTATCACCTGCGGAAAGAGACATGAATCTCGTGTCACAGCACTGCACCTAGAGTCCTTAGACCTCAATGGCCATTTACCCCCCTGTATTGGCAATCTCACTTTCCTCACACGAATTCACCTATCGAATAATAGGTTGAATGGTGAGATCCCAATTGAAGTAGGCCACCTACGCCGTCTAGTTTACATAAACCTTTCTTCAAACAATCTTACTGGTGTGATACCAAACTCTCTATCTTCTTGCTCTAGCCTTGAAATACTTAATCTTGGGAACAACTTCCTCCAAGGGGAGATACCCCTTGGTCTGAGCAACTGTTCAAATCTCAAAAGAATCGTCCTCCATGAAAACATGCTTCACGGTGGCATTCCTGATGGGTTCACCGCGCTCGACAAACTTTCGGTTTTGTTTGCCCATAGCAACAACTTGTCAGGTAACATTCCTCATTCACTTGGAAGCGTCTCGTCACTCACCTATGTCGTTCTCGCAAACAATAGTCTTACTGGAGGTATACCCCCTGTGCTAGCAAATTGTTCATCACTTCAGTGGCTTGACTTAAGGAAGAATCACATCGGTGGAGAGATACCACCCGCTCTATTCAATAGCTCCTCACTACAGGCCATAAATTTGGCAGAAAACAACTTTTTTGGGTCCATTCCACCTTTGTCAGACCTCTCATCAATTCAATTTCTTTATCTGTCCTACAATAATCTCTCAGGTAGCATACCATCTTCTCTAGGCAACTCCACTTCACTTTACTCACTTCTGCTTGCATGGAATGAATTGCAAGGAAGTATTCCATCGAGTTTAAGTAGAATTCCGTACTTAGAAGAACTGGAATTCACTGGGAACAACTTGACAGGAACAGTTCCACTCCCTCTCTACAATATGTCAACACTCACATTCCTTGGCATGGCAGAAAATAATCTGATAGGAGAATTACCACAAAATATTGGGTATACTCTTAAAAGCATCGAAATGTTCATTCTGCAAGGAAACAAATTCCATGGTCAAATTCCCAAATCATTGGCCAAAGCAACAAATCTTCAATTGATTAATCTCAGAGAAAATGCATTCAAAGGTATTATTCCTTATTTTGGGTCCTTACCCAACTTGACCATTCTCGATCTAGGTAAGAACCAGCTTGAAGCTGGAGATTGGACTTTCCTCCCAGCATTAGCACATACACAGCTGGCCGAATTATATTTAGATGCAAATAACCTTCAAGGAAGCCTGCCAAGTTCCACTGGTGATCTTCCACAAAGCATGAAAATATTAGTTTTGACATCCAATTTCATCTCTGGCACCATACCACAGGAGATAGAACAACTCAGAAACCTCGTACTGCTTCAAATTGACCATAATTTGCTGACAGGCAACCTTCCTGACTCACTTGGAAATCTTTCAAACTTACTCATTCTAAGCTTAGCACAAAACAGTTTTTATGGGAAAATCCCACTTTCAATTGGTAAACTAAATCAGTTAACTGAGCTTTACCTGCAAGATAACTCTTTCAGTGGACTCATCCCCAAGGCCTTAGGACAATGCCAAAAACTAGATATACTAAATCTTTCTTGTAACTCCTTGGAAGGAACAATACCAAAGGAATTATTTACTATTTCCACACTTTCTGAAGGTCTGGACCTCTCACACAACAGACTCTCTGGACCTATACCAGTGGAAGTTGGTAGTTTGATTAATCTTGGCCCCCTCAATATTTCAAACAACAAATTGTCAGGAGAAATTCCCTCAGCTCTAGGTGATTGTGTCCGTCTTGAGTATCTCAACATGGAGGGGAATGTTCTTAATGGGCAAATTCCTAAATCTTTTTCTGCACTGAGAGGCATCATTCAGATGGATCTTTCTCGGAACAACTTATCTGGTCAAATTCCAGAGTTTTTTGAGACTCTGAGCTCTATGGTGCTTCTTAATTTGTCATTCAACAACCTAGAGGGACCCATACCATCCAATGGGATCTTCCAAAATGCAAGCAAGGTTTTTCTCCAAGGGAACAAGGAGTTGTGTGCCATCTCACCACTACTGAAATTGCCACTTTGTCAGATATCTGCTTCTAAAAACAACCACACTTCCTATATTGCAAAGGTAGTAGGGCTCAGCGTTTTCTGTTTGGTATTTTTGTCATGTTTAGCAGTGTTTTTTCTGAAGAGAAAAAAAGCTAAAAATCCAACAGACCCATCATATAAGAAATTGGAGAAACTCACATATGCTGATTTAGTCAAAGTAACGAACAACTTTTCTCCAACCAACTTAATTGGTTCGGGGAAATATGGATCAGTATATGTTGGTAAATTTGACGCCGAAGCACATGCAGTTGCTATCAAAGTTTTCAAACTTGATCAACTTGGAGCACCAAAAAGCTTCATAGCAGAGTGTGAGGCCTTGAGGAACACCCGCCATCGCAATCTCGTAAGGGTGATCACCGCATGCTCAACATTTGATCCGACAGGACATGAGTTCAAAGCTCTTGTTCTTGAATACATGGTTAATGGCAACCTAGAATGTTGGCTGCATCCAACATCCTACAAGAATCGTCCGAGGAATCCAGTGAGGTTATCTACAAGAATAGAAATAGCATTGGACATGGCTGCTGCTTTGGATTATCTCCATAACCGTTGCATGCCACCTATTGTCCATTGTGATCTGAAGCCAAGCAATGTCCTTCTGGATAATGCCATGGGTGCACGTGTTAGCGACTTTGGATTAGCTAAGTTCCTTCACAGCAATATTTCTTCGACAAGTGATAGGTCTACAAGCT]

[+] EMBL AK099816             [AGCTACAGCTAGTCTTCCACAAACATAACAGCAACAACATCCATAGTAGCGGATAGATGATTCCTATAGGAACTCTCACTCCCTCACTTCTCACTTTTGCTGTCCTGTATGCTTTCTTGACCCTCCCATTAATTCCGTCACTAAGTAGCACCGCACTCGATGATGAATCCAACAAGGATCTCCAGGCCCTCCTTTGTCTCAAGTCTCGTCTCTCTAACAATGCAAGATCCCTAGCCTCATGGAACGAGTCTCTCCAATTTTGCACTTGGCCCGGTATCACCTGCGGAAAGAGACATGAATCTCGTGTCACAGCACTGCACCTAGAGTCCTTAGACCTCAATGGCCATTTACCCCCCTGTATTGGCAATCTCACTTTCCTCACACGAATTCACCTATCGAATAATAGGTTGAATGGTGAGATCCCAATTGAAGTAGGCCACCTACGCCGTCTAGTTTACATAAACCTTTCTTCAAACAATCTTACTGGTGTGATACCAAACTCTCTATCTTCTTGCTCTAGCCTTGAAATACTTAATCTTGGGAACAACTTCCTCCAAGGGGAGATACCCCTTGGTCTGAGCAACTGTTCAAATCTCAAAAGAATCGTCCTCCATGAAAACATGCTTCACGGTGGCATTCCTGATGGGTTCACCGCGCTCGACAAACTTTCGGTTTTGTTTGCCCATAGCAACAACTTGTCAGGTAACATTCCTCATTCACTTGGAAGCGTCTCGTCACTCACCTATGTCGTTCTCGCAAACAATAGTCTTACTGGAGGTATACCCCCTGTGCTAGCAAATTGTTCATCACTTCAGTGGCTTGACTTAAGGAAGAATCACATCGGTGGAGAGATACCACCCGCTCTATTCAATAGCTCCTCACTACAGGCCATAAATTTGGCAGAAAACAACTTTTTTGGGTCCATTCCACCTTTGTCAGACCTCTCATCAATTCAATTTCTTTATCTGTCCTACAATAATCTCTCAGGTAGCATACCATCTTCTCTAGGCAACTCCACTTCACTTTACTCACTTCTGCTTGCATGGAATGAATTGCAAGGAAGTATTCCATCGAGTTTAAGTAGAATTCCGTACTTAGAAGAACTGGAATTCACTGGGAACAACTTGACAGGAACAGTTCCACTCCCTCTCTACAATATGTCAACACTCACATTCCTTGGCATGGCAGAAAATAATCTGATAGGAGAATTACCACAAAATATTGGGTATACTCTTAAAAGCATCGAAATGTTCATTCTGCAAGGAAACAAATTCCATGGTCAAATTCCCAAATCATTGGCCAAAGCAACAAATCTTCAATTGATTAATCTCAGAGAAAATGCATTCAAAGGTATTATTCCTTATTTTGGGTCCTTACCCAACTTGACCATTCTCGATCTAGGTAAGAACCAGCTTGAAGCTGGAGATTGGACTTTCCTCCCAGCATTAGCACATACACAGCTGGCCGAATTATATTTAGATGCAAATAACCTTCAAGGAAGCCTGCCAAGTTCCACTGGTGATCTTCCACAAAGCATGAAAATATTAGTTTTGACATCCAATTTCATCTCTGGCACCATACCACAGGAGATAGAACAACTCAGAAACCTCGTACTGCTTCAAATTGACCATAATTTGCTGACAGGCAACCTTCCTGACTCACTTGGAAATCTTTCAAACTTACTCATTCTAAGCTTAGCACAAAACAGTTTTTATGGGAAAATCCCACTTTCAATTGGTAAACTAAATCAGTTAACTGAGCTTTACCTGCAAGATAACTCTTTCAGTGGACTCATCCCCAAGGCCTTAGGACAATGCCAAAAACTAGATATACTAAATCTTTCTTGTAACTCCTTGGAAGGAACAATACCAAAGGAATTATTTACTATTTCCACACTTTCTGAAGGTCTGGACCTCTCACACAACAGACTCTCTGGACCTATACCAGTGGAAGTTGGTAGTTTGATTAATCTTGGCCCCCTCAATATTTCAAACAACAAATTGTCAGGAGAAATTCCCTCAGCTCTAGGTGATTGTGTCCGTCTTGAGTATCTCAACATGGAGGGGAATGTTCTTAATGGGCAAATTCCTAAATCTTTTTCTGCACTGAGAGGCATCATTCAGATGGATCTTTCTCGGAACAACTTATCTGGTCAAATTCCAGAGTTTTTTGAGACTCTGAGCTCTATGGTGCTTCTTAATTTGTCATTCAACAACCTAGAGGGACCCATACCATCCAATGGGATCTTCCAAAATGCAAGCAAGGTTTTTCTCCAAGGGAACAAGGAGTTGTGTGCCATCTCACCACTACTGAAATTGCCACTTTGTCAGATATCTGCTTCTAAAAACAACCACACTTCCTATATTGCAAAGGTAGTAGGGCTCAGCGTTTTCTGTTTGGTATTTTTGTCATGTTTAGCAGTGTTTTTTCTGAAGAGAAAAAAAGCTAAAAATCCAACAGACCCATCATATAAGAAATTGGAGAAACTCACATATGCTGATTTAGTCAAAGTAACGAACAACTTTTCTCCAACCAACTTAATTGGTTCGGGGAAATATGGATCAGTATATGTTGGTAAATTTGACGCCGAAGCACATGCAGTTGCTATCAAAGTTTTCAAACTTGATCAACTTGGAGCACCAAAAAGCTTCATAGCAGAGTGTGAGGCCTTGAGGAACACCCGCCATCGCAATCTCGTAAGGGTGATCACCGCATGCTCAACATTTGATCCGACAGGACATGAGTTCAAAGCTCTTGTTCTTGAATACATGGTTAATGGCAACCTAGAATGTTGGCTGCATCCAACATCCTACAAGAATCGTCCGAGGAATCCAGTGAGGTTATCTACAAGAATAGAAATAGCATTGGACATGGCTGCTGCTTTGGATTATCTCCATAACCGTTGCATGCCACCTATTGTCCATTGTGATCTGAAGCCAAGCAATGTCCTTCTGGATAATGCCATGGGTGCACGTGTTAGCGACTTTGGATTAGCTAAGTTCCTTCACAGCAATATTTCTTCGACAAGTGATAGGTCTACAAGCT]
[-] EMBL CF305559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAACTAGATATACTAAATCTTTCTTGTAACTCCTTGGAAGGAACAATACCAAAGGAATTATTTACTATTTCCACACTTTCTGAAGGTCTGGACCTCTCACACAACAGACTCTCTGGACCTATACCAGTGGAAGTTGGTAGTTTGATTAATCTTGGCCCCCTCAATATTTCAAACAACAAATTGTCAGGAGAAATTCCCTCAGCTCTAGGTGATTGTGTCCGTCTTGAGTATCTCAACATGGAGGGGAATGTTCTTAATGGGCAAATTCCTAAATCTTTTTCTGCACTGAGAGGCATCATTCAGATGGATCTTTCTCGGAACAACTTATCTGGTCAAATTCCAGAGTTTTTTGAGACTCTGAGCTCTATGGTGCTTCTTAATTTGACATTCAACAACCTAGAGGGACCCATACCATCCAATGGGATCTTCCAAAATGCAAGCAAGGTTTTTCTCCAAGGGAACAAGGAGTTGTGTGCCATCTCACCACTACTGAAATTGCCACTTTGTCAGATATCTGCTTCTAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_3874#0
AGCTACAGCTAGTCTTCCACAAACATAACAGCAACAACATCCATAGTAGCGGATAGATGA
TTCCTATAGGAACTCTCACTCCCTCACTTCTCACTTTTGCTGTCCTGTATGCTTTCTTGA
CCCTCCCATTAATTCCGTCACTAAGTAGCACCGCACTCGATGATGAATCCAACAAGGATC
TCCAGGCCCTCCTTTGTCTCAAGTCTCGTCTCTCTAACAATGCAAGATCCCTAGCCTCAT
GGAACGAGTCTCTCCAATTTTGCACTTGGCCCGGTATCACCTGCGGAAAGAGACATGAAT
CTCGTGTCACAGCACTGCACCTAGAGTCCTTAGACCTCAATGGCCATTTACCCCCCTGTA
TTGGCAATCTCACTTTCCTCACACGAATTCACCTATCGAATAATAGGTTGAATGGTGAGA
TCCCAATTGAAGTAGGCCACCTACGCCGTCTAGTTTACATAAACCTTTCTTCAAACAATC
TTACTGGTGTGATACCAAACTCTCTATCTTCTTGCTCTAGCCTTGAAATACTTAATCTTG
GGAACAACTTCCTCCAAGGGGAGATACCCCTTGGTCTGAGCAACTGTTCAAATCTCAAAA
GAATCGTCCTCCATGAAAACATGCTTCACGGTGGCATTCCTGATGGGTTCACCGCGCTCG
ACAAACTTTCGGTTTTGTTTGCCCATAGCAACAACTTGTCAGGTAACATTCCTCATTCAC
TTGGAAGCGTCTCGTCACTCACCTATGTCGTTCTCGCAAACAATAGTCTTACTGGAGGTA
TACCCCCTGTGCTAGCAAATTGTTCATCACTTCAGTGGCTTGACTTAAGGAAGAATCACA
TCGGTGGAGAGATACCACCCGCTCTATTCAATAGCTCCTCACTACAGGCCATAAATTTGG
CAGAAAACAACTTTTTTGGGTCCATTCCACCTTTGTCAGACCTCTCATCAATTCAATTTC
TTTATCTGTCCTACAATAATCTCTCAGGTAGCATACCATCTTCTCTAGGCAACTCCACTT
CACTTTACTCACTTCTGCTTGCATGGAATGAATTGCAAGGAAGTATTCCATCGAGTTTAA
GTAGAATTCCGTACTTAGAAGAACTGGAATTCACTGGGAACAACTTGACAGGAACAGTTC
CACTCCCTCTCTACAATATGTCAACACTCACATTCCTTGGCATGGCAGAAAATAATCTGA
TAGGAGAATTACCACAAAATATTGGGTATACTCTTAAAAGCATCGAAATGTTCATTCTGC
AAGGAAACAAATTCCATGGTCAAATTCCCAAATCATTGGCCAAAGCAACAAATCTTCAAT
TGATTAATCTCAGAGAAAATGCATTCAAAGGTATTATTCCTTATTTTGGGTCCTTACCCA
ACTTGACCATTCTCGATCTAGGTAAGAACCAGCTTGAAGCTGGAGATTGGACTTTCCTCC
CAGCATTAGCACATACACAGCTGGCCGAATTATATTTAGATGCAAATAACCTTCAAGGAA
GCCTGCCAAGTTCCACTGGTGATCTTCCACAAAGCATGAAAATATTAGTTTTGACATCCA
ATTTCATCTCTGGCACCATACCACAGGAGATAGAACAACTCAGAAACCTCGTACTGCTTC
AAATTGACCATAATTTGCTGACAGGCAACCTTCCTGACTCACTTGGAAATCTTTCAAACT
TACTCATTCTAAGCTTAGCACAAAACAGTTTTTATGGGAAAATCCCACTTTCAATTGGTA
AACTAAATCAGTTAACTGAGCTTTACCTGCAAGATAACTCTTTCAGTGGACTCATCCCCA
AGGCCTTAGGACAATGCCAAAAACTAGATATACTAAATCTTTCTTGTAACTCCTTGGAAG
GAACAATACCAAAGGAATTATTTACTATTTCCACACTTTCTGAAGGTCTGGACCTCTCAC
ACAACAGACTCTCTGGACCTATACCAGTGGAAGTTGGTAGTTTGATTAATCTTGGCCCCC
TCAATATTTCAAACAACAAATTGTCAGGAGAAATTCCCTCAGCTCTAGGTGATTGTGTCC
GTCTTGAGTATCTCAACATGGAGGGGAATGTTCTTAATGGGCAAATTCCTAAATCTTTTT
CTGCACTGAGAGGCATCATTCAGATGGATCTTTCTCGGAACAACTTATCTGGTCAAATTC
CAGAGTTTTTTGAGACTCTGAGCTCTATGGTGCTTCTTAATTTGTCATTCAACAACCTAG
AGGGACCCATACCATCCAATGGGATCTTCCAAAATGCAAGCAAGGTTTTTCTCCAAGGGA
ACAAGGAGTTGTGTGCCATCTCACCACTACTGAAATTGCCACTTTGTCAGATATCTGCTT
CTAAAAACAACCACACTTCCTATATTGCAAAGGTAGTAGGGCTCAGCGTTTTCTGTTTGG
TATTTTTGTCATGTTTAGCAGTGTTTTTTCTGAAGAGAAAAAAAGCTAAAAATCCAACAG
ACCCATCATATAAGAAATTGGAGAAACTCACATATGCTGATTTAGTCAAAGTAACGAACA
ACTTTTCTCCAACCAACTTAATTGGTTCGGGGAAATATGGATCAGTATATGTTGGTAAAT
TTGACGCCGAAGCACATGCAGTTGCTATCAAAGTTTTCAAACTTGATCAACTTGGAGCAC
CAAAAAGCTTCATAGCAGAGTGTGAGGCCTTGAGGAACACCCGCCATCGCAATCTCGTAA
GGGTGATCACCGCATGCTCAACATTTGATCCGACAGGACATGAGTTCAAAGCTCTTGTTC
TTGAATACATGGTTAATGGCAACCTAGAATGTTGGCTGCATCCAACATCCTACAAGAATC
GTCCGAGGAATCCAGTGAGGTTATCTACAAGAATAGAAATAGCATTGGACATGGCTGCTG
CTTTGGATTATCTCCATAACCGTTGCATGCCACCTATTGTCCATTGTGATCTGAAGCCAA
GCAATGTCCTTCTGGATAATGCCATGGGTGCACGTGTTAGCGACTTTGGATTAGCTAAGT
TCCTTCACAGCAATATTTCTTCGACAAGTGATAGGTCTACAAGCT
clustalw multiple alignements is not computed in this case