These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3891#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2551 fasta sequence [GCAATGGAAGGCGACGAAGAGCCACCGGCGGCGGCGGCGATGGCGGCCGTGCTGACGGACGATTTCCTGCTCCGATCCATCCTGAAGTGTCTGTGTCCGAGGGATGTGGTCCGCGCGGCCCTTGCCAACAAGAGCTGGCGGCGCGCGGCGGCCCTCGCCGTCCCCCGCACACCGCCGCTCGTCGGCTACCTCCTGCACCCGGAGAAAATCCGGTCGGCCCAGATCCCCCCCGTCTTCGTCCCCAGCGACGCCTCGTTCCCGCGCCTCTCCCTCCCCTTGGCTCCCGACGACCTCTCCGGTGTGTCCGTGCACGATGTCCACCACGGCCTGGTCCTTCTACTACCCTGCGAGCTTCCCGACATTCTCCTGCTCCGCATACTGGTGCTCGATCCGGCATCCGGACGCCGGGCTCTGCTCCCTCCTCCGCCGCGCGACGCTCTGCCCGACGACCAGTGGCGCCAAACCCGGCGCATCATCGGCGCCGCGGTGCTCTCGCGCGCGCATCCCAGTAGGCTGCACTTCCAGGCGGTCTGCGTCACCATCGACGACGACCGCCCTCGCGCCTGGGTCGCCTTCGTCAACGGCGAGGATTGCCTCTGGTGCATCCTTCCACGCTCCAAGCATGTTAGGGTTCTTCGTTTTGATCTCAGCATGTGCTGTGCCGCCCACGATCAGGGACAGATCTGCTGGATCGCCTCCAACTCCAACCAAGTGCTCGCACTGGAACCTTCATCTTTGGAGTTTCAGTTCATAACTTCTTCTCCAGCTGCTGTGCCGGTTGATGTATTTGCATATTTTCTGTCTTGGCCACCTGCATTTCTTAGCCTGCTCGAGGAGAATGATGATGCGCTAACTGACAGCTTGATGAGTCTTATTAAAATAGTCTTCTACAATATATGCTACGTGAGAGGATTGTTTTCTAAGGAGTTCTTCTCTGATATGCCTTTTCTACCGACAGGGATGCAGATAAAAAAGCTTACGCCGATGGATGACGAGTCCCAAAGGCTTGTTGATTGGCTAGAAAAAGGTGTTTATGATGCTCTGAAAAAGAAGTTCCTCAAAACTATCATCTTCTCTATCTATGATGAGAAGGGCCCTCTGTTGGAGGAGTATTGCCTATCATTCACATACTTCAGCGAAATTACAATCGACTTACGGCTGACGGGATCCACTCAAAGTATATGGACAATGAGGTCCGATGCAGCTGAGAGCTTTGTTAATCAAATTTGCCTCTGGACTATGAACCTCCTTTTTTTGAGAGTTATGATGATATGAGAAAACGTTGTCCGCTCCCACTACATACTACTTTATCAGATTACTCACAAGATTTGATCAGTTTACATGATGTAAAATCAGTGCTCTCCAACAATCCCTTTCATTCCAACAAGGTTTTTGCAATGGACCCAAAAAGCAAAATCCAACAAGGGCACCTTTTTTGCATTACTAAGAAAGATGTCCACTTCTATTTTGATTCTGGTGCTAGCCACCACATGTGTGATGATGATAAACTCTTCAAAAATCTCCATGAGGTTCCTACTGAACATCAGGATACTGTTTATGATGCTAGTGGCGACCCAGTGTGCCTGCACATGTCCGGTGAAGTGATATATGATCAAATCAAATTGAGTCCAGTATTCTACCACTCTACTCTCAAATTTAAAGTTGTATCTCTTGGTGAACTGGATGATTCTAACACCCTCATGTATGTTGGAGATAAAAGGATTAAAATCTTTGATGTAAATAAAGGTGAAATGATCGGCGAGGGATATCTCCACGAAAAGAGAAATGAATATATAGTTCGAAGCATCATATGCAGAAAAGAAGAACAACAAGCTATAACCAGATCGATGTTGTCCTCAACGGCAATTGATGAGAAAAATTTGTGGGTAGTTGATTCTCTATGCTGCA-ATCACATGACTGGTATAAAGGGACTTCTAT-CTGATACAAGACACGAGGTAGAGTCATTT-GTTACCCCCAGAGGTGCAT-TTTTAAGCTC-AAAAATTGGAAATGTGAAGACTAGTACA-GTAACACTGT-TTAATGTGTTGTACTGTAAGGG-A-CTGAG-ACAGAATCTCATATCCGAAGGTCAATTAGACCGTGACGGCTATTCATGTACAAGGCTTGCTCACAAATGC-AAGATTCAGTGGAGAGGGACTCAAGAAGTTGTTGGTCTAGCTCATCAGGACGAGAATGCACTGTATTACGTGGATTATTTTCACTATGTCAGCGACCCATCTTTGAAGCATACGAGGAATGATGGAGAATGCATAC-AGAAG-TTGAAGCGTCCGCGGCAAGATGGATCCTCTCCATCTAGTAGGAAAAGGACTGCGTAAACTGGATAGATGTGTTCATTTTGTCTTTTGTAAACATGAGAAGAATACCACCCAACA--TACGAAGATTTGATGTGCTCTGTTGTTTCAACATTTTTAAACCTCGTTCTTACAGATGATGGTTGCATGCTAGTAATACCCAGGAAAATGCTTTTTCCATTTGATTTACATTGGCTCGCGTTAGTATAGCCCTCAAAAAATCTAAGGACANCTTTCTTTAAAAA] [+] EMBL AK119338 [GCAATGGAAGGCGACGAAGAGCCACCGGCGGCGGCGGCGATGGCGGCCGTGCTGACGGACGATTTCCTGCTCCGATCCATCCTGAAGTGTCTGTGTCCGAGGGATGTGGTCCGCGCGGCCCTTGCCAACAAGAGCTGGCGGCGCGCGGCGGCCCTCGCCGTCCCCCGCACACCGCCGCTCGTCGGCTACCTCCTGCACCCGGAGAAAATCCGGTCGGCCCAGATCCCCCCCGTCTTCGTCCCCAGCGACGCCTCGTTCCCGCGCCTCTCCCTCCCCTTGGCTCCCGACGACCTCTCCGGTGTGTCCGTGCACGATGTCCACCACGGCCTGGTCCTTCTACTACCCTGCGAGCTTCCCGACATTCTCCTGCTCCGCATACTGGTGCTCGATCCGGCATCCGGACGCCGGGCTCTGCTCCCTCCTCCGCCGCGCGACGCTCTGCCCGACGACCAGTGGCGCCAAACCCGGCGCATCATCGGCGCCGCGGTGCTCTCGCGCGCGCATCCCAGTAGGCTGCACTTCCAGGCGGTCTGCGTCACCATCGACGACGACCGCCCTCGCGCCTGGGTCGCCTTCGTCAACGGCGAGGATTGCCTCTGGTGCATCCTTCCACGCTCCAAGCATGTTAGGGTTCTTCGTTTTGATCTCAGCATGTGCTGTGCCGCCCACGATCAGGGACAGATCTGCTGGATCGCCTCCAACTCCAACCAAGTGCTCGCACTGGAACCTTCATCTTTGGAGTTTCAGTTCATAACTTCTTCTCCAGCTGCTGTGCCGGTTGATGTATTTGCATATTTTCTGTCTTGGCCACCTGCATTTCTTAGCCTGCTCGAGGAGAATGATGATGCGCTAACTGACAGCTTGATGAGTCTTATTAAAATAGTCTTCTACAATATATGCTACGTGAGAGGATTGTTTTCTAAGGAGTTCTTCTCTGATATGCCTTTTCTACCGACAGGGATGCAGATAAAAAAGCTTACGCCGATGGATGACGAGTCCCAAAGGCTTGTTGATTGGCTAGAAAAAGGTGTTTATGATGCTCTGAAAAAGAAGTTCCTCAAAACTATCATCTTCTCTATCTATGATGAGAAGGGCCCTCTGTTGGAGGAGTATTGCCTATCATTCACATACTTCAGCGAAATTACAATCGACTTACGGCTGACGGGATCCACTCAAAGTATATGGACAATGAGGTCCGATGCAGCTGAGAGCTTTGTTAATCAAATTTGCCTCTGGACTATGAACCTCCTTTTTTTGAGAGTTATGATGATATGAGAAAACGTTGTCCGCTCCCACTACATACTACTTTATCAGATTACTCACAAGATTTGATCAGTTTACATGATGTAAAATCAGTGCTCTCCAACAATCCCTTTCATTCCAACAAGGTTTTTGCAATGGACCCAAAAAGCAAAATCCAACAAGGGCACCTTTTTTGCATTACTAAGAAAGATGTCCACTTCTATTTTGATTCTGGTGCTAGCCACCACATGTGTGATGATGATAAACTCTTCAAAAATCTCCATGAGGTTCCTACTGAACATCAGGATACTGTTTATGATGCTAGTGGCGACCCAGTGTGCCTGCACATGTCCGGTGAAGTGATATATGATCAAATCAAATTGAGTCCAGTATTCTACCACTCTACTCTCAAATTTAAAGTTGTATCTCTTGGTGAACTGGATGATTCTAACACCCTCATGTATGTTGGAGATAAAAGGATTAAAATCTTTGATGTAAATAAAGGTGAAATGATCGGCGAGGGATATCTCCACGAAAAGAGAAATGAATATATAGTTCGAAGCATCATATGCAGAAAAGAAGAACAACAAGCTATAACCAGATCGATGTTGTCCTCAACGGCAATTGATGAGAAAAATTTGTGGGTAGTTGATTCTCTATGCTGCA ATCACATGACTGGTATAAAGGGACTTCTAT CTGATACAAGACACGAGGTACAGTCATTT GTTACCCCCAGAGGTGCAT TTTTAAGCTC AAAAATTGGAAATGTGAAGACTAGTACA GTAACACTGT TTAATGTGTTGTACTGTAAGGG A CTGAG ACAGAATCTCATATCCGAAGGTCAATTAGACCGTGACGGCTATTCATGTACAAGGCTTGCTCACAAATGC AAGATTCAGTGGAGAGGGACTCAAGAAGTTGTTGGTCTAGCTCATCAGGACGAGAATGCACTGTATTACGTGGATTATTTTCACTATGTCAGCGACCCATCTTTGAAGCATACGAGGAATGATGGAGAATGCATAC AGAAG TTGAAGCGTCCGCGGCAAGATGGATCCTCTCCATCTAGTAGGAAAAGGACTGCGTAAACTGGATAGATGTGTTCATTTTGTCTTTTGTAAACATGAGAAGAATACCACCCAACA TACGAAGATTTGATGTGCTCTGTTGTTTCAACATTTTTAAACCTCGTTCTTACAGATGATGGTTGCATGCTAGT ] [+] EMBL BI806247 [ cataccagaAAGAACAACAAGCTATAACCAGATCGATG TGTCCTCAACGGCAATTGATGAGAAAAAATTGTGGGTAGTTGATTCTCTATGCTGCACATCACATGACTGGTATAAAGGGACTTCTAT CTGATACAAGACACGAGGTAGAGTCATTT GTTACCCCCAGAGGT CAT TTTTAAGCTC AAAAATTGGAAATGTGAAGACTAGTACA GTAACACTGT TTAATGTGTTGTACTGTAAGGG A CTGAG ACAGAATCTCATATCCGAAGGTCAATTAGACCGTGACGGCTATTCATGTACAAGGCTTGCTCACAAATGCAAAGATTCAGTGGAGAGGGACTCAAGAA TTGTTGGTCTAGCTCATCAGGACGAGAATGCACTGTATTACGTGGATTATTTTCACTATGTCAGCGACCCATCTTTGAAGCATACGAGGAATGATGGAGAATGCATACAAGAAGTTTGAAGCGTCC C GCAAGATGGATCCTCTCCATCTAGTAGGAAAAGGACTGCGTAAACTGGATAGATGTGTTCA TTTGTCTTTGGTAAACATGAGAAGAAT CCACCCAACA T CGAAGATTTGATGTaaaaaaaa ] [+] EMBL BI806567 [ GGACTTGGATGCNGAACCANGAC CGGGTTGGATCCATTTNGTGACCCCCAGA GNGCATNTNTAAAGCTCGAAAAATGGGAAATGTGAAGACT GT CAGGTAACACNGTGTTAATGTGTTGTACTGTAAGGGTACCTGAGTACAGAATCTCATATCCGAAGTTCAATTAGACCGTGACGGCTATTCATGTACAAGGCTTGCTCACAAATGC AAGATTCAGTGGAGAGGGACTCAAGAAGTTGTTGGTCTAGCTCATCAGGACGAGAATGCACTGTATTACGTGGATTATTTTCACTATGTCAGCGACCCATCTTTGAAGCATACGAGGAATGATGGAGAATGCATAC AGAAG TTGAAGCGTCCGCGGCAAGATGGATCCTCTCCATCTAGTAGGAAAAGGACTGCGTAAACTGGATAGATGTGTTCATTTTGTCTTTTGTAAACATGAGAAGAATACCACCCTACACNNCCGAAGATTTGATGTGCTCTGTTGTTTCAACATTTTTAAACCTCGTTCTTACAGATGATGGTTGCATGCTAGTAATACCCAGGAAAATGCTTTTTCCATTTGATTTACATTGGCTCGCGTTAGTATAGCCCTCAAAAAATCTAAGGACANCTTTCTTTAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||