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Oryza sativa
cluster # 3896 cluster # 3896       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3896#0 length = 3706 sequences # 2  
 consensus_3896#1 length = 282 sequences # 1  
consensusID : consensus_3896#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3706
fasta sequence 
                              [TCCTCGCTTACTCCTCAGTCCCCCACCCACCACCCCAGTTGCTCCCCCCGCTGGCGAGATGCGGGGCGGAGCGGGAGCCCTTCCGGTGCCAGGCGGCCTCGCGCTCGGGGTGGTGCTGCTTCTAGTTCTCGCCGTGCTGCCGTCCCGGGCGGCCGGGGTGAACGTGACGGCCGCGCTCGCGGCTTTCCCCAGCTTCGCCGACTTCGCGCGGCTTCTGGAGTCGAGCCCGGTGGCCGGGGAGCTGGCGGCGCGGTCGTCGCTGACGCTGCTGGCCGTGCCGAACAACAACCTGCCGCGCTCGCCCTCGGCGTTCGCGGCGGCCTCCGGCGCCGACATCGCCGATGTGCTGCGGTACCACGTCCTGCTTGAGTACCTCTCCCCTTCTGACCTCGCGCGCCTCCCCGCCTCCGGGAAGCTCGTGACGACGCTGTTCCAGACCACCGGGCGCGCGCCCTCCGATCTCGGCGCCGTCAACCTCACCGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGCCACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGGCCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGTCAACATCACCCACGTCCTCGCGGACGCGCGGGGGTTCAACGTTGCTGCCTCCATGCTGGAGGCATCGGGCGTCGCGGACGAGTTCACGGCAGACGAGCGCGGCGCCGGCATCACCGTCTTCGTGCCCACCGACGACGCCTTCGCCGACCTCCCCGCCACCGACCGCCTCCAGTCCCTCCCCGCAGATCGCAAGGCCACCGTGCTTCGCTTCCACGTGCTGCACTCGTACTATCCGCTCGGCTCCCTCGAGTCCATCGTGAACCCCGTGCAGCCCACGCTCGCCACCGAGCGCTTCGAGGCCGGCCAGTTCACGCTAAACATCACACGCGTCAATGGCTCCGTCGCCATCGACACCGGCATCGTGCAGGCTTCGATCACCCGCACGGTGTTCGACCAAAATCCCGTTGCGGTGTTTGCCGTCTCGAAGGTTCTACTGCCCAAGGAAATGTTCGGTCGGGGCGGTGCTGATAGCGACGTCATGGCGCCGCCGCCGGACGCGATGGCGCCAGATGCTGCCGAGAACGTGCGGACGCCGCCGACGAGACTGTCGTCACCTCCAGCACTGCGGGGTGGCGCTGATAGTGAGTCGTCATCAGCATTGTCAACGGCAAGGGCTGTCAATTGGTGGTGTATACGGTTGGTGCTCCTAAATCTGCATCTCTTACTACTACCTCTGGTATGAGATCCGGATGTTACCCATTGCTCGCTTCATTTTGCTCAATTTTTGTTCTTCTGTTACTATTTTCCCCATTTTAGAATGTGTACTACGGGAATGTGATGGGTAGAGAATTTTATAGGGGCAAAAGCAGTAGCAATTTGTCTAGTTTCTTTATTAGTTTTAACGAAATAATATCATGTGTAGAGAGACCTATGAAACCTACTTGTTCCAAAACGAACAGCAGCATGTTCATAGTTGTTCTAATCAGGTCAGTTTGTGTTTGAACTGAAGTCCAATTGGGGCTAGCATTACTGGGGAATTGGTGTGAGGAACTGAGGATTACTGGGGAATCGATTTGTGTGTCTTTTGTATTAAGGTAAGGTGCAGAAGAATTTGAAGACATGCATTTGCCTGGTATTTTGTTTATCAAGGACCTGAAGTCTTGGAGTCAGGGTTCTGGAGATTGATAGATAGGTGGTAAGCGTGAGGAATGAGCTGGCCAGCTTGGAGGTGGCCTGGTTGTCTACCCCTGTTTTTGATTCTCACTCCTCTTTCCTGCTAATGACGCGGACTCTAGTTGCGCTTGCTGTTACTATTCCCTGAAGACAAATTGAACACATGTCCACCCTTTAGCTGATTGGTCAGGATTTTCCACCGTTAAATTTCTGTTGAGGACATAAACCAACCATTTAGGGTGGCATATGCTCAATTATCCCTTTTTTTATCTAACCATATAGGGTGGCCTACCACGTACTCCTTGCTGATCATTTGGCTAGTTTCGTAGCGTGTGAACTGAAATCTGATAAGTTGGTTTGCAGTTAAATTAAATAGCTTATGCCCCAGCTCCAAAAGCTTCCTATATGAACTTTAGCAGCCCTAAGATCTGAAGAGAAGAAGTTTAGCAGCATTGTATACCAGGTTGCGAATTTACTGATAGGTAGGTGTTCTGATTCTTGTGACTACCTATCAGGTATTGCTCATTTCATGCAAGTTAGGTAGTTGTATATTGTTGTGTTTGGTAGAGATTTGAGGGAATTTAAACCATCCCAATAAAGAGTTTGAAATTCTAGGTGCTATTGTCATGCATTGCTAGTCTAACGTCTAAACATATCCAAATAGTCTGTCAGTTATCCAAACATGTCGACCAAAAACATGAGTTGTTGTAACTTGTATATGCCTCTGGTAGCTACCGTTTATATGTGCGGCTATTCCTAACATTCTGTGGTGTTTCATGTTCATAATGGCTGGTGGGTTTTTGGGGAGGGACCACTGTGCATGAAACTTTTGTATGTAGTTTCACTAGAGTCCATGAAAGTGGACCTATTGAGGTTGCCCATCTTTATTCGATTAGTTTCTGGACCCGTTTGGTCATGTGCCAGCTCATGCGTACTTTACAAGAGCCATGGGACCCATCAAGTTCTTTTCTGAATAATATCCATGAGATGAGCCATGGTTGAAATGTCAAACTTTCTAAATAATGACGTGCACATTTTCTGCTTTCTTTGTAAACTAGCGTCTTGGAAATTCAGCATTAATACTGGATGCGATGTGTTTGTCATAGACTTGTAACTATTCATTAAACTTGTAACTACTTCAGTAAAAGTGTATCCTCTGTACCACTGAAGAGTGAAGAAATGAATGCAGAATAGAAAACCCTGCCTATCTGAAATATACTGTTCAGATTGCGGAGAATATTTATACTAAAAAAAGTTCAATATTTATCATATGTCTCGAGTGTCTTCATGTCATGAAAACAAATGAGGTGATATTTATGAAAGATCAAAGTAATGAGTCGTTTGGAACACCTAGGTTCTTGGGCAAGATAAGATTTAGCAATAATGCATATAGGTATGTTGGATTAGTGGCAAATTACTGGTTTAGTTTATTGTTGCGGACTTGTCCATCTATAGCCTACAGTGAAATCAAGAGGCATTTGTATCTATGTTTTCAATTTCACATTCTGAAGTCTTGTCAGAAAAATACCGGCATATGCTGTAGAAAACAGTGTAACACCAATATCTTGTTCTTTGTTGTGCGCTGCAGCATGCACTTGTCACCTATTGTGCTACAGTTTTTTTTTTTTTTTGGGGGGGGGGATGGGTACAGTCTTGAGACTGAATTTCAGCAATAATGAATAAATGGAAGGTGCCCATCTATTTTAATATTTTTTACCTTTTGATTTTTGTTCTCATGCTCCTTGTCTGAAGCTTCATCTTTTCTGTAAGATCATTTAACCTATCTCTGTAACTTAAATCCTAGAGTAGGAATATGCAATGTTCTTTTCTGTAAGTTCTTGTAACCTATTCCTGCAAATGAGCTTAATGGAGTTCTGAACTTCTTATACATACTCCATCAAAGGATTGTGCATCTAAAATTCCTGATTACCTG]

[+] EMBL AK121828             [TCCTCGCTTACTCCTCAGTCCCCCACCCACCACCCCAGTTGCTCCCCCCGCTGGCGAGATGCGGGGCGGAGCGGGAGCCCTTCCGGTGCCAGGCGGCCTCGCGCTCGGGGTGGTGCTGCTTCTAGTTCTCGCCGTGCTGCCGTCCCGGGCGGCCGGGGTGAACGTGACGGCCGCGCTCGCGGCTTTCCCCAGCTTCGCCGACTTCGCGCGGCTTCTGGAGTCGAGCCCGGTGGCCGGGGAGCTGGCGGCGCGGTCGTCGCTGACGCTGCTGGCCGTGCCGAACAACAACCTGCCGCGCTCGCCCTCGGCGTTCGCGGCGGCCTCCGGCGCCGACATCGCCGATGTGCTGCGGTACCACGTCCTGCTTGAGTACCTCTCCCCTTCTGACCTCGCGCGCCTCCCCGCCTCCGGGAAGCTCGTGACGACGCTGTTCCAGACCACCGGGCGCGCGCCCTCCGATCTCGGCGCCGTCAACCTCACCGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGCCACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGGCCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGTCAACATCACCCACGTCCTCGCGGACGCGCGGGGGTTCAACGTTGCTGCCTCCATGCTGGAGGCATCGGGCGTCGCGGACGAGTTCACGGCAGACGAGCGCGGCGCCGGCATCACCGTCTTCGTGCCCACCGACGACGCCTTCGCCGACCTCCCCGCCACCGACCGCCTCCAGTCCCTCCCCGCAGATCGCAAGGCCACCGTGCTTCGCTTCCACGTGCTGCACTCGTACTATCCGCTCGGCTCCCTCGAGTCCATCGTGAACCCCGTGCAGCCCACGCTCGCCACCGAGCGCTTCGAGGCCGGCCAGTTCACGCTAAACATCACACGCGTCAATGGCTCCGTCGCCATCGACACCGGCATCGTGCAGGCTTCGATCACCCGCACGGTGTTCGACCAAAATCCCGTTGCGGTGTTTGCCGTCTCGAAGGTTCTACTGCCCAAGGAAATGTTCGGTCGGGGCGGTGCTGATAGCGACGTCATGGCGCCGCCGCCGGACGCGATGGCGCCAGATGCTGCCGAGAACGTGCGGACGCCGCCGACGAGACTGTCGTCACCTCCAGCACTGCGGGGTGGCGCTGATAGTGAGTCGTCATCAGCATTGTCAACGGCAAGGGCTGTCAATTGGTGGTGTATACGGTTGGTGCTCCTAAATCTGCATCTCTTACTACTACCTCTGGTATGAGATCCGGATGTTACCCATTGCTCGCTTCATTTTGCTCAATTTTTGTTCTTCTGTTACTATTTTCCCCATTTTAGAATGTGTACTACGGGAATGTGATGGGTAGAGAATTTTATAGGGGCAAAAGCAGTAGCAATTTGTCTAGTTTCTTTATTAGTTTTAACGAAATAATATCATGTGTAGAGAGACCTATGAAACCTACTTGTTCCAAAACGAACAGCAGCATGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK119375             [                 GTCCCCCACCCACCACCCCAGTTGCTCCCCCCGCTGGCGAGATGCGGGGCGGAGCGGGAGCCCTTCCGGTGCCAGGCGGCCTCGCGCTCGGGGTGGTGCTGCTTCTAGTTCTCGCCATGCTGCCGTCCCGGGCGGCCGGGGTGAACGTGACGGCCGCGCTCGCGGCTTTCCCCAGCTTCGCCGACTTCGCGCGGCTTCTGGAGTCGAGCCCGGTGGCCGGGGAGCTGGCGGCGCGGTCGTCGCTGACGCTGCTGGCCGTGCCGAGCAACAACCTGCCGCGCTCGCCCTCGGCGTTCGCGGCGGCCTCCGGCGCCGACATCGCCGATGTGCTGCGGTACCACGTCCTGCTTGAGTACCTCTCCCCTTCTGACCTCGCGCGCCTCCCCGCCCCCGGGAAGCTCGTGACGACGCTGTTCCAGACCACCGGGCGCGCGCCCTCCGATCTCGGCGCCGTCAACCTCACCGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGCCACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGGCCTCATCGACCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGTCAACATCACCCACGTCCTCGCGGACGCGCGGGGGTTCAACGTTGCTGCCTCCATGCTGGAGGCATCGGGCGTCGCGGACGAGTTCACGGCAGACGAGCGCGGCGCCGGCATCACCGTCTTCGTGCCCACCGACGACGCCTTCGCCGACCTCCCCGCCACCGACCGCCTCCAGTCCCTCCCCGCAGATCGCAAGGCCACCGTGCTTCGCTTCCACGTGCTGCACTCGTACTATCCGCTCGGCTCCCTCGAGTCCATCGTGAACCCCGTGCAGCCCACGCTCGCCACCGAGCGCTTCGAGGCCGGCCAGTTCACGCTAAACATCACACGCGTCAATGGCTCCGTCGCCATCGACACCGGCATCGTGCAGGCTTCGATCACCCGCACGGTGTTCGACCAAAATCCCGTTGCGGTGTTTGCCGTCTCGAAGGTTCTACTGCCCAAGGAAATGTTCGGTCGGGGCGGTGCTGATAGCGACGTCATGGCGCCGCCGCCGGACGCGATGGCGCCAGATGCTGCCGAGAACGTGCGGACGCCGCCGACGAGACTGTCGTCACCTCCAGCACTGCGGGGTGGCGCTGATAGTGAGTCGTCATCAGCATTGTCAACGGCAAGGGCTGTCAATTGGTGGTGTATACGGTTGGTGCTCCTAAATCTGCATCTCTTACTACTACCTCTGGTATGAGATCCGGATGTTACCCATTGCTCGCTTCATTTTGCTCAATTTTTGTTCTTCTGTTACTATTTTCCCCATTTTAGAATGTGTACTACGGGAATGTGATGGGTAGAGAATTTTATAGGGGCAAAAGCAGTAGCAATTTGTCTAGTTTCTTTATTAGTTTTAACGAAATAATATCATGTGTAGAGAGACCTATGAAACCTACTTGTTCCAAAACGAACAGCAGCATGTTCATAGTTGTTCTAATCAGGTCAGTTTGTGTTTGAACTGAAGTCCAATTGGGGCTAGCATTACTGGGGAATTGGTGTGAGGAACTGAGGATTACTGGGGAATCGATTTGTGTGTCTTTTGTATTAAGGTAAGGTGCAGAAGAATTTGAAGACATGCATTTGCCTGGTATTTTGTTTATCAAGGACCTGAAGTCTTGGAGTCAGGGTTCTGGAGATTGATAGATAGGTGGTAAGCGTGAGGAATGAGCTGGCCAGCTTGGAGGTGGCCTGGTTGTCTACCCCTGTTTTTGATTCTCACTCCTCTTTCCTGCTAATGACGCGGACTCTAGTTGCGCTTGCTGTTACTATTCCCTGAAGACAAATTGAACACATGTCCACCCTTTAGCTGATTGGTCAGGATTTTCCACCGTTAAATTTCTGTTGAGGACATAAACCAACCATTTAGGGTGGCATATGCTCAATTATCCCTTTTTTTATCTAACCATATAGGGTGGCCTACCACGTACTCCTTGCTGATCATTTGGCTAGTTTCGTAGCGTGTGAACTGAAATCTGATAAGTTGGTTTGCAGTTAAATTAAATAGCTTATGCCCCAGCTCCAAAAGCTTCCTATATGAACTTTAGCAGCCCTAAGATCTGAAGAGAAGAAGTTTAGCAGCATTGTATACCAGGTTGCGAATTTACTGATAGGTAGGTGTTCTGATTCTTGTGACTACCTATCAGGTATTGCTCATTTCATGCAAGTTAGGTAGTTGTATATTGTTGTGTTTGGTAGAGATTTGAGGGAATTTAAACCATCCCAATAAAGAGTTTGAAATTCTAGGTGCTATTGTCATGCATTGCTAGTCTAACGTCTAAACATATCCAAATAGTCTGTCAGTTATCCAAACATGTCGACCAAAAACATGAGTTGTTGTAACTTGTATATGCCTCTGGTAGCTACCGTTTATATGTGCGGCTATTCCTAACATTCTGTGGTGTTTCATGTTCATAATGGCTGGTGGGTTTTTGGGGAGGGACCACTGTGCATGAAACTTTTGTATGTAGTTTCACTAGAGTCCATGAAAGTGGACCTATTGAGGTTGCCCATCTTTATTCGATTAGTTTCTGGACCCGTTTGGTCATGTGCCAGCTCATGCGTACTTTACAAGAGCCATGGGACCCATCAAGTTCTTTTCTGAATAATATCCATGAGATGAGCCATGGTTGAAATGTCAAACTTTCTAAATAATGACGTGCACATTTTCTGCTTTCTTTGTAAACTAGCGTCTTGGAAATTCAGCATTAATACTGGATGCGATGTGTTTGTCATAGACTTGTAACTATTCATTAAACTTGTAACTACTTCAGTAAAAGTGTATCCTCTGTACCACTGAAGAGTGAAGAAATGAATGCAGAATAGAAAACCCTGCCTATCTGAAATATACTGTTCAGATTGCGGAGAATATTTATACTAAAAAAAGTTCAATATTTATCATATGTCTCGAGTGTCTTCATGTCATGAAAACAAATGAGGTGATATTTATGAAAGATCAAAGTAATGAGTCGTTTGGAACACCTAGGTTCTTGGGCAAGATAAGATTTAGCAATAATGCATATAGGTATGTTGGATTAGTGGCAAATTACTGGTTTAGTTTATTGTTGCGGACTTGTCCATCTATAGCCTACAGTGAAATCAAGAGGCATTTGTATCTATGTTTTCAATTTCACATTCTGAAGTCTTGTCAGAAAAATACCGGCATATGCTGTAGAAAACAGTGTAACACCAATATCTTGTTCTTTGTTGTGCGCTGCAGCATGCACTTGTCACCTATTGTGCTACAGTTTTTTTTTTTTTTTGGGGGGGGGGATGGGTACAGTCTTGAGACTGAATTTCAGCAATAATGAATAAATGGAAGGTGCCCATCTATTTTAATATTTTTTACCTTTTGATTTTTGTTCTCATGCTCCTTGTCTGAAGCTTCATCTTTTCTGTAAGATCATTTAACCTATCTCTGTAACTTAAATCCTAGAGTAGGAATATGCAATGTTCTTTTCTGTAAGTTCTTGTAACCTATTCCTGCAAATGAGCTTAATGGAGTTCTGAACTTCTTATACATACTCCATCAAAGGATTGTGCATCTAAAATTCCTGATTACCTG]




>consensus_3896#0
TCCTCGCTTACTCCTCAGTCCCCCACCCACCACCCCAGTTGCTCCCCCCGCTGGCGAGAT
GCGGGGCGGAGCGGGAGCCCTTCCGGTGCCAGGCGGCCTCGCGCTCGGGGTGGTGCTGCT
TCTAGTTCTCGCCGTGCTGCCGTCCCGGGCGGCCGGGGTGAACGTGACGGCCGCGCTCGC
GGCTTTCCCCAGCTTCGCCGACTTCGCGCGGCTTCTGGAGTCGAGCCCGGTGGCCGGGGA
GCTGGCGGCGCGGTCGTCGCTGACGCTGCTGGCCGTGCCGAACAACAACCTGCCGCGCTC
GCCCTCGGCGTTCGCGGCGGCCTCCGGCGCCGACATCGCCGATGTGCTGCGGTACCACGT
CCTGCTTGAGTACCTCTCCCCTTCTGACCTCGCGCGCCTCCCCGCCTCCGGGAAGCTCGT
GACGACGCTGTTCCAGACCACCGGGCGCGCGCCCTCCGATCTCGGCGCCGTCAACCTCAC
CGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGC
CACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGG
CCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGT
CAACATCACCCACGTCCTCGCGGACGCGCGGGGGTTCAACGTTGCTGCCTCCATGCTGGA
GGCATCGGGCGTCGCGGACGAGTTCACGGCAGACGAGCGCGGCGCCGGCATCACCGTCTT
CGTGCCCACCGACGACGCCTTCGCCGACCTCCCCGCCACCGACCGCCTCCAGTCCCTCCC
CGCAGATCGCAAGGCCACCGTGCTTCGCTTCCACGTGCTGCACTCGTACTATCCGCTCGG
CTCCCTCGAGTCCATCGTGAACCCCGTGCAGCCCACGCTCGCCACCGAGCGCTTCGAGGC
CGGCCAGTTCACGCTAAACATCACACGCGTCAATGGCTCCGTCGCCATCGACACCGGCAT
CGTGCAGGCTTCGATCACCCGCACGGTGTTCGACCAAAATCCCGTTGCGGTGTTTGCCGT
CTCGAAGGTTCTACTGCCCAAGGAAATGTTCGGTCGGGGCGGTGCTGATAGCGACGTCAT
GGCGCCGCCGCCGGACGCGATGGCGCCAGATGCTGCCGAGAACGTGCGGACGCCGCCGAC
GAGACTGTCGTCACCTCCAGCACTGCGGGGTGGCGCTGATAGTGAGTCGTCATCAGCATT
GTCAACGGCAAGGGCTGTCAATTGGTGGTGTATACGGTTGGTGCTCCTAAATCTGCATCT
CTTACTACTACCTCTGGTATGAGATCCGGATGTTACCCATTGCTCGCTTCATTTTGCTCA
ATTTTTGTTCTTCTGTTACTATTTTCCCCATTTTAGAATGTGTACTACGGGAATGTGATG
GGTAGAGAATTTTATAGGGGCAAAAGCAGTAGCAATTTGTCTAGTTTCTTTATTAGTTTT
AACGAAATAATATCATGTGTAGAGAGACCTATGAAACCTACTTGTTCCAAAACGAACAGC
AGCATGTTCATAGTTGTTCTAATCAGGTCAGTTTGTGTTTGAACTGAAGTCCAATTGGGG
CTAGCATTACTGGGGAATTGGTGTGAGGAACTGAGGATTACTGGGGAATCGATTTGTGTG
TCTTTTGTATTAAGGTAAGGTGCAGAAGAATTTGAAGACATGCATTTGCCTGGTATTTTG
TTTATCAAGGACCTGAAGTCTTGGAGTCAGGGTTCTGGAGATTGATAGATAGGTGGTAAG
CGTGAGGAATGAGCTGGCCAGCTTGGAGGTGGCCTGGTTGTCTACCCCTGTTTTTGATTC
TCACTCCTCTTTCCTGCTAATGACGCGGACTCTAGTTGCGCTTGCTGTTACTATTCCCTG
AAGACAAATTGAACACATGTCCACCCTTTAGCTGATTGGTCAGGATTTTCCACCGTTAAA
TTTCTGTTGAGGACATAAACCAACCATTTAGGGTGGCATATGCTCAATTATCCCTTTTTT
TATCTAACCATATAGGGTGGCCTACCACGTACTCCTTGCTGATCATTTGGCTAGTTTCGT
AGCGTGTGAACTGAAATCTGATAAGTTGGTTTGCAGTTAAATTAAATAGCTTATGCCCCA
GCTCCAAAAGCTTCCTATATGAACTTTAGCAGCCCTAAGATCTGAAGAGAAGAAGTTTAG
CAGCATTGTATACCAGGTTGCGAATTTACTGATAGGTAGGTGTTCTGATTCTTGTGACTA
CCTATCAGGTATTGCTCATTTCATGCAAGTTAGGTAGTTGTATATTGTTGTGTTTGGTAG
AGATTTGAGGGAATTTAAACCATCCCAATAAAGAGTTTGAAATTCTAGGTGCTATTGTCA
TGCATTGCTAGTCTAACGTCTAAACATATCCAAATAGTCTGTCAGTTATCCAAACATGTC
GACCAAAAACATGAGTTGTTGTAACTTGTATATGCCTCTGGTAGCTACCGTTTATATGTG
CGGCTATTCCTAACATTCTGTGGTGTTTCATGTTCATAATGGCTGGTGGGTTTTTGGGGA
GGGACCACTGTGCATGAAACTTTTGTATGTAGTTTCACTAGAGTCCATGAAAGTGGACCT
ATTGAGGTTGCCCATCTTTATTCGATTAGTTTCTGGACCCGTTTGGTCATGTGCCAGCTC
ATGCGTACTTTACAAGAGCCATGGGACCCATCAAGTTCTTTTCTGAATAATATCCATGAG
ATGAGCCATGGTTGAAATGTCAAACTTTCTAAATAATGACGTGCACATTTTCTGCTTTCT
TTGTAAACTAGCGTCTTGGAAATTCAGCATTAATACTGGATGCGATGTGTTTGTCATAGA
CTTGTAACTATTCATTAAACTTGTAACTACTTCAGTAAAAGTGTATCCTCTGTACCACTG
AAGAGTGAAGAAATGAATGCAGAATAGAAAACCCTGCCTATCTGAAATATACTGTTCAGA
TTGCGGAGAATATTTATACTAAAAAAAGTTCAATATTTATCATATGTCTCGAGTGTCTTC
ATGTCATGAAAACAAATGAGGTGATATTTATGAAAGATCAAAGTAATGAGTCGTTTGGAA
CACCTAGGTTCTTGGGCAAGATAAGATTTAGCAATAATGCATATAGGTATGTTGGATTAG
TGGCAAATTACTGGTTTAGTTTATTGTTGCGGACTTGTCCATCTATAGCCTACAGTGAAA
TCAAGAGGCATTTGTATCTATGTTTTCAATTTCACATTCTGAAGTCTTGTCAGAAAAATA
CCGGCATATGCTGTAGAAAACAGTGTAACACCAATATCTTGTTCTTTGTTGTGCGCTGCA
GCATGCACTTGTCACCTATTGTGCTACAGTTTTTTTTTTTTTTTGGGGGGGGGGATGGGT
ACAGTCTTGAGACTGAATTTCAGCAATAATGAATAAATGGAAGGTGCCCATCTATTTTAA
TATTTTTTACCTTTTGATTTTTGTTCTCATGCTCCTTGTCTGAAGCTTCATCTTTTCTGT
AAGATCATTTAACCTATCTCTGTAACTTAAATCCTAGAGTAGGAATATGCAATGTTCTTT
TCTGTAAGTTCTTGTAACCTATTCCTGCAAATGAGCTTAATGGAGTTCTGAACTTCTTAT
ACATACTCCATCAAAGGATTGTGCATCTAAAATTCCTGATTACCTG

consensusID : consensus_3896#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 282
fasta sequence 
                              [AACCTCACCGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGCCACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGGCCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGTCAACATCAACCACGTCCCCGCNAACGACCGCNTCCAGTCCCTCCCCGCAGATCGCAAGGGCAACGTGCTTCGCTTCAACGTGCTGNANTCGTAA]

[+] EMBL C74578               [AACCTCACCGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGCCACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGGCCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGTCAACATCAACCACGTCCCCGCNAACGACCGCNTCCAGTCCCTCCCCGCAGATCGCAAGGGCAACGTGCTTCGCTTCAACGTGCTGNANTCGTAA]




>consensus_3896#1
AACCTCACCGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGG
TCGAGCGCCACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCG
GTGGGTGGCCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCC
GGTGGCGTCAACATCAACCACGTCCCCGCNAACGACCGCNTCCAGTCCCTCCCCGCAGAT
CGCAAGGGCAACGTGCTTCGCTTCAACGTGCTGNANTCGTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3896#0      TCCTCGCTTACTCCTCAGTCCCCCACCCACCACCCCAGTTGCTCCCCCCGCTGGCGAGAT 60
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GCGGGGCGGAGCGGGAGCCCTTCCGGTGCCAGGCGGCCTCGCGCTCGGGGTGGTGCTGCT 120
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TCTAGTTCTCGCCGTGCTGCCGTCCCGGGCGGCCGGGGTGAACGTGACGGCCGCGCTCGC 180
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GGCTTTCCCCAGCTTCGCCGACTTCGCGCGGCTTCTGGAGTCGAGCCCGGTGGCCGGGGA 240
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GCTGGCGGCGCGGTCGTCGCTGACGCTGCTGGCCGTGCCGAACAACAACCTGCCGCGCTC 300
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GCCCTCGGCGTTCGCGGCGGCCTCCGGCGCCGACATCGCCGATGTGCTGCGGTACCACGT 360
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CCTGCTTGAGTACCTCTCCCCTTCTGACCTCGCGCGCCTCCCCGCCTCCGGGAAGCTCGT 420
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GACGACGCTGTTCCAGACCACCGGGCGCGCGCCCTCCGATCTCGGCGCCGTCAACCTCAC 480
consensus_3896#1      ----------------------------------------------------AACCTCAC 8
                                                                          ********

consensus_3896#0      CGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGC 540
consensus_3896#1      CGTCGGGGGAAACTCCACCGTCGTGGTCCGGTCGCCGGCGCCTTTCCCGGGGTCGAGCGC 68
                      ************************************************************

consensus_3896#0      CACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGG 600
consensus_3896#1      CACTGTCCTCGGCGCCGTCACCGCTGTGCCTTACAACCTCAGCGTGCTCGCGGTGGGTGG 128
                      ************************************************************

consensus_3896#0      CCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGT 660
consensus_3896#1      CCTCATCGTCCCCTCCGGGCTCGACGTCGCGGCCTCCGACAGCCGCCCGGCCGGTGGCGT 188
                      ************************************************************

consensus_3896#0      CAACATCACCCACGTCCTCGCGGACGCGCGGGGGTTCAACGTTGCTGCCTCCATGCTGGA 720
consensus_3896#1      CAACATCAACCACGTCCCCGCNAACGACCGCN--TCCA--GTCCCTCCCCGCAGATCGCA 244
                      ******** ******** ***  ***  **    * **  **  ** **  **    * *

consensus_3896#0      GGCATCGGGCGTCGCGGACGAGTTCACGGCAGACGAGCGCGGCGCCGGCATCACCGTCTT 780
consensus_3896#1      AGGGCAACGTGCTTCGCTTCAACGTGCTGNANTCGTAA---------------------- 282
                       *      * *   **    *     * * *  **                         

consensus_3896#0      CGTGCCCACCGACGACGCCTTCGCCGACCTCCCCGCCACCGACCGCCTCCAGTCCCTCCC 840
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CGCAGATCGCAAGGCCACCGTGCTTCGCTTCCACGTGCTGCACTCGTACTATCCGCTCGG 900
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CTCCCTCGAGTCCATCGTGAACCCCGTGCAGCCCACGCTCGCCACCGAGCGCTTCGAGGC 960
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CGGCCAGTTCACGCTAAACATCACACGCGTCAATGGCTCCGTCGCCATCGACACCGGCAT 1020
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CGTGCAGGCTTCGATCACCCGCACGGTGTTCGACCAAAATCCCGTTGCGGTGTTTGCCGT 1080
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CTCGAAGGTTCTACTGCCCAAGGAAATGTTCGGTCGGGGCGGTGCTGATAGCGACGTCAT 1140
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GGCGCCGCCGCCGGACGCGATGGCGCCAGATGCTGCCGAGAACGTGCGGACGCCGCCGAC 1200
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GAGACTGTCGTCACCTCCAGCACTGCGGGGTGGCGCTGATAGTGAGTCGTCATCAGCATT 1260
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GTCAACGGCAAGGGCTGTCAATTGGTGGTGTATACGGTTGGTGCTCCTAAATCTGCATCT 1320
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CTTACTACTACCTCTGGTATGAGATCCGGATGTTACCCATTGCTCGCTTCATTTTGCTCA 1380
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ATTTTTGTTCTTCTGTTACTATTTTCCCCATTTTAGAATGTGTACTACGGGAATGTGATG 1440
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GGTAGAGAATTTTATAGGGGCAAAAGCAGTAGCAATTTGTCTAGTTTCTTTATTAGTTTT 1500
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AACGAAATAATATCATGTGTAGAGAGACCTATGAAACCTACTTGTTCCAAAACGAACAGC 1560
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AGCATGTTCATAGTTGTTCTAATCAGGTCAGTTTGTGTTTGAACTGAAGTCCAATTGGGG 1620
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CTAGCATTACTGGGGAATTGGTGTGAGGAACTGAGGATTACTGGGGAATCGATTTGTGTG 1680
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TCTTTTGTATTAAGGTAAGGTGCAGAAGAATTTGAAGACATGCATTTGCCTGGTATTTTG 1740
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TTTATCAAGGACCTGAAGTCTTGGAGTCAGGGTTCTGGAGATTGATAGATAGGTGGTAAG 1800
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CGTGAGGAATGAGCTGGCCAGCTTGGAGGTGGCCTGGTTGTCTACCCCTGTTTTTGATTC 1860
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TCACTCCTCTTTCCTGCTAATGACGCGGACTCTAGTTGCGCTTGCTGTTACTATTCCCTG 1920
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AAGACAAATTGAACACATGTCCACCCTTTAGCTGATTGGTCAGGATTTTCCACCGTTAAA 1980
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TTTCTGTTGAGGACATAAACCAACCATTTAGGGTGGCATATGCTCAATTATCCCTTTTTT 2040
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TATCTAACCATATAGGGTGGCCTACCACGTACTCCTTGCTGATCATTTGGCTAGTTTCGT 2100
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AGCGTGTGAACTGAAATCTGATAAGTTGGTTTGCAGTTAAATTAAATAGCTTATGCCCCA 2160
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GCTCCAAAAGCTTCCTATATGAACTTTAGCAGCCCTAAGATCTGAAGAGAAGAAGTTTAG 2220
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CAGCATTGTATACCAGGTTGCGAATTTACTGATAGGTAGGTGTTCTGATTCTTGTGACTA 2280
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CCTATCAGGTATTGCTCATTTCATGCAAGTTAGGTAGTTGTATATTGTTGTGTTTGGTAG 2340
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AGATTTGAGGGAATTTAAACCATCCCAATAAAGAGTTTGAAATTCTAGGTGCTATTGTCA 2400
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TGCATTGCTAGTCTAACGTCTAAACATATCCAAATAGTCTGTCAGTTATCCAAACATGTC 2460
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GACCAAAAACATGAGTTGTTGTAACTTGTATATGCCTCTGGTAGCTACCGTTTATATGTG 2520
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CGGCTATTCCTAACATTCTGTGGTGTTTCATGTTCATAATGGCTGGTGGGTTTTTGGGGA 2580
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GGGACCACTGTGCATGAAACTTTTGTATGTAGTTTCACTAGAGTCCATGAAAGTGGACCT 2640
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ATTGAGGTTGCCCATCTTTATTCGATTAGTTTCTGGACCCGTTTGGTCATGTGCCAGCTC 2700
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ATGCGTACTTTACAAGAGCCATGGGACCCATCAAGTTCTTTTCTGAATAATATCCATGAG 2760
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ATGAGCCATGGTTGAAATGTCAAACTTTCTAAATAATGACGTGCACATTTTCTGCTTTCT 2820
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TTGTAAACTAGCGTCTTGGAAATTCAGCATTAATACTGGATGCGATGTGTTTGTCATAGA 2880
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CTTGTAACTATTCATTAAACTTGTAACTACTTCAGTAAAAGTGTATCCTCTGTACCACTG 2940
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AAGAGTGAAGAAATGAATGCAGAATAGAAAACCCTGCCTATCTGAAATATACTGTTCAGA 3000
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TTGCGGAGAATATTTATACTAAAAAAAGTTCAATATTTATCATATGTCTCGAGTGTCTTC 3060
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ATGTCATGAAAACAAATGAGGTGATATTTATGAAAGATCAAAGTAATGAGTCGTTTGGAA 3120
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CACCTAGGTTCTTGGGCAAGATAAGATTTAGCAATAATGCATATAGGTATGTTGGATTAG 3180
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TGGCAAATTACTGGTTTAGTTTATTGTTGCGGACTTGTCCATCTATAGCCTACAGTGAAA 3240
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TCAAGAGGCATTTGTATCTATGTTTTCAATTTCACATTCTGAAGTCTTGTCAGAAAAATA 3300
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      CCGGCATATGCTGTAGAAAACAGTGTAACACCAATATCTTGTTCTTTGTTGTGCGCTGCA 3360
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      GCATGCACTTGTCACCTATTGTGCTACAGTTTTTTTTTTTTTTTGGGGGGGGGGATGGGT 3420
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ACAGTCTTGAGACTGAATTTCAGCAATAATGAATAAATGGAAGGTGCCCATCTATTTTAA 3480
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TATTTTTTACCTTTTGATTTTTGTTCTCATGCTCCTTGTCTGAAGCTTCATCTTTTCTGT 3540
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      AAGATCATTTAACCTATCTCTGTAACTTAAATCCTAGAGTAGGAATATGCAATGTTCTTT 3600
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      TCTGTAAGTTCTTGTAACCTATTCCTGCAAATGAGCTTAATGGAGTTCTGAACTTCTTAT 3660
consensus_3896#1      ------------------------------------------------------------
                                                                                  

consensus_3896#0      ACATACTCCATCAAAGGATTGTGCATCTAAAATTCCTGATTACCTG 3706
consensus_3896#1      ----------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)