cluster # 390

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Oryza sativa
cluster # 390 cluster # 390 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_390#0 length = 1042 sequences # 2

consensusID : consensus_390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1042
fasta sequence

                              [ACTAAGAGTATTTTTGACGTGTTTACCGGAATGTATTTCCGCTATTGCTCCGAAATGGTTTAGATAGCAAGGAGGCCGCAGAGAAGTGGAGAGGACTCACGAATCACGATCCATTTCTATCTTGAGGGAATTGGGGATAGCAAAAGTCAGTGAAAAGGGCCAGATGACAAGCATGGACAAGGCAGCAAATGTGGTATTGGATATTGAAGGGCTGCCTCAGCAACCTGATAAATGCTGCACTGGAAGTCCAAAAATGACTAGAGCCCTATCTCGCAAGGGCTCAAATCGCATGGAAAGGAGGAGCGGTGAAGAGCAGGAACAAGATGACTTGGTGAAGAAACTTATTATTAAGGTTGTGCCATCTCAGTTGGAGCAGCTTAAGATGCCCCTGGTGCAGAACAAAGCCTTGGTCACTCCACAATCACAATGTGCTGCCTGTGCACCTATTCTAACTGACTCTGGGGAAGGAAGGAACAAGAAGTTTAATCGACTTACCTCGGTTCACCCCCGGAAAATCCTACTGTTCTTTGCAACTCTGTCGAGCGTGGGCACAATGATACTGATATACTTCACGCTCGCAATCAACGGTGGCAAAGCGGAGGCGTAGTCGTCACCGGAGCGAAACACGACAACGGTTTCAGAAGTGCATTTCATAGCTGGAATTTTCGCTTCTCGTTATCAGATTTTGGTTTGTTTGGGAGGAGAGAACTGGAGGAGGAAGCAACAGTAGCAGCAGCAATGATGCAGCCAGGC-TCTCATGCCTGAC--ACACAATGCTGGGAGTGTTGCTCGATCAGTGCTCCATTGTCACCTTTGCCTGACCTGATCTCCCTGAATTCTTTTGATCTGTACATGTAAATTGCTGTGAGGCCTTTGTTGAGAGGTAGAGAGAGAGAGAAAGAGAGATCCATGGATTGTTGTTGGTGTAAATGAGCTGGGGCGAAGCTATCCATTTCTGCCATGCGAGTCCCAGCTTAGCTGTAAAAGATTTGAAGGGAATAATTATGCCTTTGTGGAGTTGCAGTGAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101246             [ACTAAGAGTATTTTTGACGTGTTTACCGGAATGTATTTCCGCTATTGCTCCGAAATGGTTTAGATAGCAAGGAGGCCGCAGAGAAGTGGAGAGGACTCACGAATCACGATCCATTTCTATCTTGAGGGAATTGGGGATAGCAAAAGTCAGTGAAAAGGGCCAGATGACAAGCATGGACAAGGCAGCAAATGTGGTATTGGATATTGAAGGGCTGCCTCAGCAACCTGATAAATGCTGCACTGGAAGTCCAAAAATGACTAGAGCCCTATCTCGCAAGGGCTCAAATCGCATGGAAAGGAGGAGCGGTGAAGAGCAGGAACAAGATGACTTGGTGAAGAAACTTATTATTAAGGTTGTGCCATCTCAGTTGGAGCAGCTTAAGATGCCCCTGGTGCAGAACAAAGCCTTGGTCACTCCACAATCACAATGTGCTGCCTGTGCACCTATTCTAACTGACTCTGGGGAAGGAAGGAACAAGAAGTTTAATCGACTTACCTCGGTTCACCCCCGGAAAATCCTACTGTTCTTTGCAACTCTGTCGAGCGTGGGCACAATGATACTGATATACTTCACGCTCGCAATCAACGGTGGCAAAGCGGAGGCGTAGTCGTCACCGGAGCGAAACACGACAACGGTTTCAGAAGTGCATTTCATAGCTGGAATTTTCGCTTCTCGTTATCAGATTTTGGTTTGTTTGGGAGGAGAGAACTGGAGGAGGAAGCAACAGTAGCAGCAGCAATGATGCAGCCAGGC TCTCATGCCTGAC  ACACAATGCTGGGAGTGTTGCTCGATCAGTGCTCCATTGTCACCTTTGCCTGACCTGATCTCCCTGAATTCTTTTGATCTGTACATGTAAATTGCTGTGAGGCCTTTGTTGAGAGGTAGAGAGAGAGAGAAAGAGAGATCCATGGATTGTTGTTGGTGTAAATGAGCTGGGGCGAAGCTATCCATTTCTGCCATGCGAGTCCCAGCTTAGCTGTAAAAG                                                         ]
[-] EMBL CA760221             [                                                                                                                                                                                                                                                                                                                                                                              GTTGGAGCAGCCTAAGATGGCCCTGGTGCAGAACAAAGCCTTTGTCACTCCACAATCACAATGTGCTGCCTGTGCACCTATTCTAACTGACTTTGGGGAAGGAAGGAACAAGAAGTTCCATCGGCTTAATTCGGTTCACCCCCGGAAAATCCTACTTTTCTTTGCAACTCTGTCGAGCGTGGGCACAATGATACTGATATACTGCACGCTCGCAATCAACGGTGGCAAAGAGGAGGCGTTGTTGTTTCCGGAGCGAAACACGACAACGGTTTTAGAAGTGCATTTTATAGCTGGAATTTTCGCTTCTCGGTATCAGATTTTGGTTTGTTTGGGAGGAGAGAACTGGAGGAGGAAGCAACAGTAGCAGCAGCAATGATGCAGCCCGGCTTTTCATGCCTGACAGACCCAATGCTGGGAGGGTTGCTCGATCAATGCTCCATTGTCACCTTTGCCTGACCTGATCTCCCTGAATTTTTTTGATCTGTACATGTAAAATGCTGTGAGGCCTTTGTTGAGAGGTAGAGAGAGAGAGAAAGAGAGATCCCTGGGTTGTTGGTGGGGTAAATGAGCTGGGGCGAAGCTATCCCTTTTTGCCATGCGAGTCCCAGGTTAGCTGTAAAAGATTTGAAGGGAATAATTATGCCTTTGTGGAGTTGCAGTGAAAAAAAAAAAAAAAAAA]




>consensus_390#0
ACTAAGAGTATTTTTGACGTGTTTACCGGAATGTATTTCCGCTATTGCTCCGAAATGGTT
TAGATAGCAAGGAGGCCGCAGAGAAGTGGAGAGGACTCACGAATCACGATCCATTTCTAT
CTTGAGGGAATTGGGGATAGCAAAAGTCAGTGAAAAGGGCCAGATGACAAGCATGGACAA
GGCAGCAAATGTGGTATTGGATATTGAAGGGCTGCCTCAGCAACCTGATAAATGCTGCAC
TGGAAGTCCAAAAATGACTAGAGCCCTATCTCGCAAGGGCTCAAATCGCATGGAAAGGAG
GAGCGGTGAAGAGCAGGAACAAGATGACTTGGTGAAGAAACTTATTATTAAGGTTGTGCC
ATCTCAGTTGGAGCAGCTTAAGATGCCCCTGGTGCAGAACAAAGCCTTGGTCACTCCACA
ATCACAATGTGCTGCCTGTGCACCTATTCTAACTGACTCTGGGGAAGGAAGGAACAAGAA
GTTTAATCGACTTACCTCGGTTCACCCCCGGAAAATCCTACTGTTCTTTGCAACTCTGTC
GAGCGTGGGCACAATGATACTGATATACTTCACGCTCGCAATCAACGGTGGCAAAGCGGA
GGCGTAGTCGTCACCGGAGCGAAACACGACAACGGTTTCAGAAGTGCATTTCATAGCTGG
AATTTTCGCTTCTCGTTATCAGATTTTGGTTTGTTTGGGAGGAGAGAACTGGAGGAGGAA
GCAACAGTAGCAGCAGCAATGATGCAGCCAGGCTCTCATGCCTGACACACAATGCTGGGA
GTGTTGCTCGATCAGTGCTCCATTGTCACCTTTGCCTGACCTGATCTCCCTGAATTCTTT
TGATCTGTACATGTAAATTGCTGTGAGGCCTTTGTTGAGAGGTAGAGAGAGAGAGAAAGA
GAGATCCATGGATTGTTGTTGGTGTAAATGAGCTGGGGCGAAGCTATCCATTTCTGCCAT
GCGAGTCCCAGCTTAGCTGTAAAAGATTTGAAGGGAATAATTATGCCTTTGTGGAGTTGC
AGTGAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case